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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001623
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 280 results. Now displaying 3 of 6 with 50 rows per page. This search has taken 5.799s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v2296120.1
n.a. PREDICTED: auxilin-related protein 2-like isoform X2 [Cicer arietinum] gi|502086802|ref|XP_004488331.1| chr4 32053508 32055186 +
4 domain predictions
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Lj4g3v2374840.2
n.a. DnaJ homolog subfamily B member [Medicago truncatula] gi|357478569|ref|XP_003609570.1| chr4 32754093 32755403 +
8 domain predictions
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Lj4g3v2378360.1
n.a. DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] gi|22329659|ref|NP_173305.2| chr4 32990829 32993052 -
6 domain predictions
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Lj4g3v2490570.1
n.a. PREDICTED: suppressor protein SRP40-like [Cicer arietinum] gi|502141566|ref|XP_004504547.1| chr4 33869972 33873423 -
3 domain predictions
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Lj4g3v2593520.1
n.a. PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Cicer arietinum] gi|502184163|ref|XP_004517297.1| chr4 34784952 34787622 -
8 domain predictions
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Lj4g3v2691860.1
n.a. PREDICTED: dnaJ homolog subfamily C member 2-like [Glycine max] gi|356525975|ref|XP_003531595.1| chr4 36260797 36263537 +
8 domain predictions
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Lj4g3v2826780.5
n.a. PREDICTED: auxilin-related protein 2-like [Cicer arietinum] gi|502139789|ref|XP_004503905.1| chr4 37885482 37888350 +
3 domain predictions
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Lj5g3v0108320.1
n.a. PREDICTED: myosin-9-like isoform X1 [Cicer arietinum] gi|502126084|ref|XP_004499173.1| chr5 985131 992657 +
3 domain predictions
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Lj5g3v1211590.1
n.a. Chaperone protein dnaJ [Medicago truncatula] gi|357498605|ref|XP_003619591.1| chr5 19898283 19899323 +
8 domain predictions
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Lj5g3v1427900.1
n.a. Chaperone protein dnaJ [Medicago truncatula] gi|357512127|ref|XP_003626352.1| chr5 21313834 21316931 +
8 domain predictions
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Lj5g3v1600720.1
n.a. Heat shock protein DnaJ with tetratricopeptide repeat isoform 1 [Theobroma cacao] gi|508703337|gb|EOX95233.1| chr5 23182155 23185116 +
2 domain predictions
 –
Lj5g3v1853490.1
n.a. DNAJ heat shock N-terminal domain-containing protein isoform 1 [Theobroma cacao] gi|508725308|gb|EOY17205.1| chr5 26554548 26562156 +
8 domain predictions
 –
Lj5g3v2060720.1
n.a. PREDICTED: dnaJ homolog subfamily C member 25-like [Glycine max] gi|356536059|ref|XP_003536558.1| chr5 29783988 29787435 -
8 domain predictions
 –
Lj5g3v2246090.1
n.a. PREDICTED: dnaJ homolog subfamily C member 17-like [Glycine max] gi|356575456|ref|XP_003555857.1| chr5 32580476 32583248 +
8 domain predictions
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Lj5g3v2297840.1
n.a. J-domain protein required for chloroplast accumulation response 1 [Arabidopsis lyrata subsp]. lyrata] gi|297842251|ref|XP_002889007.1| chr5 33737469 33745609 -
3 domain predictions
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Lj6g3v1093450.1
n.a. PREDICTED: auxilin-related protein 2-like isoform X1 [Cicer arietinum] gi|502086799|ref|XP_004488330.1| chr6 13363488 13367887 -
4 domain predictions
 –
Lj6g3v1139660.1
n.a. PREDICTED: translocation protein SEC63 homolog [Glycine max] gi|356530479|ref|XP_003533808.1| chr6 14033804 14040891 -
8 domain predictions
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Lj6g3v1450730.1
n.a. PREDICTED: chaperone protein dnaJ 49-like isoform 1 [Glycine max] gi|356529523|ref|XP_003533340.1| chr6 17129901 17134427 +
8 domain predictions
 –
Lj6g3v1916130.1
n.a. n.a. chr6 21663504 21667323 +
8 domain predictions
 –
Lj6g3v1916140.1
n.a. DnaJ protein-like protein [Medicago truncatula] gi|357447483|ref|XP_003594017.1| chr6 21664403 21668688 -
8 domain predictions
 –
Lj6g3v2006710.1
n.a. PREDICTED: dnaJ homolog subfamily B member 4-like [Cicer arietinum] gi|502078082|ref|XP_004485834.1| chr6 23610336 23616427 -
8 domain predictions
 –
Lj6g3v2006720.1
n.a. DnaJ homolog subfamily B member [Medicago truncatula] gi|357446733|ref|XP_003593642.1| chr6 23617521 23619832 -
8 domain predictions
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Lj6g3v2193500.1
n.a. DnaJ homolog subfamily B member [Medicago truncatula] gi|357445969|ref|XP_003593262.1| chr6 25386054 25388013 +
7 domain predictions
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Lj6g3v2218670.1
n.a. PREDICTED: dnaJ-like protein R260-like [Glycine max] gi|356525890|ref|XP_003531554.1| chr6 25834285 25834806 +
8 domain predictions
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LotjaGi1g1v0010100.1
n.a. Chaperone protein DnaJ; TAIR: AT2G05230.1 DNAJ heat shock N-terminal domain-containing protein; Swiss-Prot: sp|Q8TQR1|DNAJ_METAC Chaperone protein DnaJ; TrEMBL-Plants: tr|I1M6B1|I1M6B1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0010100 LjG1.1_chr1 1263527 1267162 -
6 domain predictions
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LotjaGi1g1v0010100.2
n.a. Chaperone protein DnaJ; TAIR: AT2G05230.1 DNAJ heat shock N-terminal domain-containing protein; Swiss-Prot: sp|Q8TQR1|DNAJ_METAC Chaperone protein DnaJ; TrEMBL-Plants: tr|I1M6B1|I1M6B1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0010100 LjG1.1_chr1 1264039 1266150 -
6 domain predictions
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LotjaGi1g1v0138900_LC.1
n.a. Chaperone protein dnaJ; TAIR: AT2G33735.1 Chaperone DnaJ-domain superfamily protein; Swiss-Prot: sp|B2V2I6|DNAJ_CLOBA Chaperone protein DnaJ; TrEMBL-Plants: tr|A0A0L9V0D0|A0A0L9V0D0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0138900_LC LjG1.1_chr1 22700232 22704351 +
6 domain predictions
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LotjaGi1g1v0140500.1
n.a. Chaperone protein DNAj, putative; TAIR: AT1G28210.1 DNAJ heat shock family protein; Swiss-Prot: sp|Q38813|DNAJ1_ARATH Chaperone protein dnaJ 1, mitochondrial; TrEMBL-Plants: tr|K7K9W1|K7K9W1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0140500 LjG1.1_chr1 23051807 23069361 +
6 domain predictions
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LotjaGi1g1v0140500.2
n.a. Chaperone protein DNAj, putative; TAIR: AT1G28210.2 DNAJ heat shock family protein; Swiss-Prot: sp|Q38813|DNAJ1_ARATH Chaperone protein dnaJ 1, mitochondrial; TrEMBL-Plants: tr|K7K9W1|K7K9W1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0140500 LjG1.1_chr1 23051826 23068758 +
6 domain predictions
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LotjaGi1g1v0140500.3
n.a. Chaperone protein DNAj, putative; TAIR: AT1G28210.1 DNAJ heat shock family protein; Swiss-Prot: sp|Q38813|DNAJ1_ARATH Chaperone protein dnaJ 1, mitochondrial; TrEMBL-Plants: tr|K7M7R2|K7M7R2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0140500 LjG1.1_chr1 23051839 23068667 +
6 domain predictions
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LotjaGi1g1v0166000.1
n.a. Chaperone protein dnaJ, putative; TAIR: AT1G77020.1 DNAJ heat shock N-terminal domain-containing protein; Swiss-Prot: sp|Q8GYX8|DNJ10_ARATH Chaperone protein dnaJ 10; TrEMBL-Plants: tr|I1MAC8|I1MAC8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0166000 LjG1.1_chr1 31512251 31516490 -
6 domain predictions
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LotjaGi1g1v0172300.1
n.a. Chaperone protein DnaJ; TAIR: AT5G53150.1 DnaJ heat shock amino-terminal domain protein; Swiss-Prot: sp|A5W9N6|CBPA_PSEP1 Curved DNA-binding protein; TrEMBL-Plants: tr|G7J6T0|G7J6T0_MEDTR DnaJ heat shock amino-terminal domain protein; Found in the gene: LotjaGi1g1v0172300 LjG1.1_chr1 32806095 32811341 -
6 domain predictions
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LotjaGi1g1v0172300.2
n.a. Chaperone protein DnaJ; TAIR: AT5G53150.1 DnaJ heat shock amino-terminal domain protein; Swiss-Prot: sp|A5W9N6|CBPA_PSEP1 Curved DNA-binding protein; TrEMBL-Plants: tr|G7J6T0|G7J6T0_MEDTR DnaJ heat shock amino-terminal domain protein; Found in the gene: LotjaGi1g1v0172300 LjG1.1_chr1 32806147 32809149 -
6 domain predictions
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LotjaGi1g1v0186900.1
n.a. Chaperone DnaJ; TAIR: AT4G10130.1 DNAJ heat shock N-terminal domain-containing protein; Swiss-Prot: sp|Q54CI5|DPH4_DICDI DPH4 homolog; TrEMBL-Plants: tr|V7AEJ7|V7AEJ7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0186900 LjG1.1_chr1 36584986 36590451 +
6 domain predictions
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LotjaGi1g1v0195600.1
n.a. Chaperone protein DnaJ; TAIR: AT1G18700.1 DNAJ heat shock N-terminal domain-containing protein; Swiss-Prot: sp|Q6NRT6|DJC10_XENLA DnaJ homolog subfamily C member 10; TrEMBL-Plants: tr|K7KVZ9|K7KVZ9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0195600 LjG1.1_chr1 38794747 38814859 -
4 domain predictions
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LotjaGi1g1v0200300.1
n.a. Chaperone protein dnaJ, putative; TAIR: AT3G57340.1 DnaJ heat shock amino-terminal domain protein (DUF1977); Swiss-Prot: sp|Q9FH28|DNJ49_ARATH Chaperone protein dnaJ 49; TrEMBL-Plants: tr|I1KDB5|I1KDB5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0200300 LjG1.1_chr1 42354713 42357411 -
6 domain predictions
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LotjaGi1g1v0214200.1
n.a. Chaperone protein dnaJ, putative; TAIR: AT3G47940.1 DNAJ heat shock family protein; Swiss-Prot: sp|Q80Y75|DJB13_MOUSE DnaJ homolog subfamily B member 13; TrEMBL-Plants: tr|V7CHS3|V7CHS3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0214200 LjG1.1_chr1 47228024 47232131 +
6 domain predictions
 –
LotjaGi1g1v0248500.1
n.a. Chaperone protein dnaJ; TAIR: AT1G77930.1 Chaperone DnaJ-domain superfamily protein; Swiss-Prot: sp|Q3MG81|DNAJ_ANAVT Chaperone protein DnaJ; TrEMBL-Plants: tr|I3T1P4|I3T1P4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0248500 LjG1.1_chr1 59657662 59662335 +
6 domain predictions
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LotjaGi1g1v0280300.1
n.a. Chaperone protein DnaJ; TAIR: AT5G53150.2 DnaJ heat shock amino-terminal domain protein; Swiss-Prot: sp|Q58DR2|DJB12_BOVIN DnaJ homolog subfamily B member 12; TrEMBL-Plants: tr|K7KUS1|K7KUS1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0280300 LjG1.1_chr1 68396291 68402278 +
6 domain predictions
 –
LotjaGi1g1v0315600.1
n.a. Chaperone protein DnaJ; TAIR: AT2G18465.1 Chaperone DnaJ-domain superfamily protein; Swiss-Prot: sp|A1WAR7|DNAJ_ACISJ Chaperone protein DnaJ; TrEMBL-Plants: tr|G7JAW9|G7JAW9_MEDTR Chaperone DnaJ domain protein; Found in the gene: LotjaGi1g1v0315600 LjG1.1_chr1 76184464 76191180 +
5 domain predictions
 –
LotjaGi1g1v0323000.1
n.a. DnaJ domain-containing protein; TAIR: AT4G12770.2 Chaperone DnaJ-domain superfamily protein; Swiss-Prot: sp|Q0WQ57|AUXI2_ARATH Auxilin-related protein 2; TrEMBL-Plants: tr|V7AYT1|V7AYT1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0323000 LjG1.1_chr1 77459776 77478017 +
3 domain predictions
 –
LotjaGi1g1v0338300.1
n.a. Chaperone protein DnaJ; TAIR: AT5G53150.2 DnaJ heat shock amino-terminal domain protein; Swiss-Prot: sp|Q0IIE8|DJB14_BOVIN DnaJ homolog subfamily B member 14; TrEMBL-Plants: tr|K7KVJ6|K7KVJ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0338300 LjG1.1_chr1 79871479 79875457 +
6 domain predictions
 –
LotjaGi1g1v0363800.1
n.a. Chaperone protein dnaJ; TAIR: AT4G07990.1 Chaperone DnaJ-domain superfamily protein; Swiss-Prot: sp|A3DF24|DNAJ_CLOTH Chaperone protein DnaJ; TrEMBL-Plants: tr|A0A151TTI8|A0A151TTI8_CAJCA Chaperone protein dnaJ; Found in the gene: LotjaGi1g1v0363800 LjG1.1_chr1 83938169 83944251 -
6 domain predictions
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LotjaGi1g1v0389700.1
n.a. Chaperone protein dnaJ; TAIR: AT5G25530.2 DNAJ heat shock family protein; Swiss-Prot: sp|Q9UDY4|DNJB4_HUMAN DnaJ homolog subfamily B member 4; TrEMBL-Plants: tr|I1K906|I1K906_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0389700 LjG1.1_chr1 87307732 87310395 -
6 domain predictions
 –
LotjaGi1g1v0441600.1
n.a. Chaperone protein dnaJ; TAIR: AT5G01390.1 DNAJ heat shock family protein; Swiss-Prot: sp|Q80Y75|DJB13_MOUSE DnaJ homolog subfamily B member 13; TrEMBL-Plants: tr|V7AJV6|V7AJV6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0441600 LjG1.1_chr1 93839234 93844157 +
6 domain predictions
 –
LotjaGi1g1v0443700.1
n.a. Chaperone protein DnaJ; TAIR: AT3G08970.1 DNAJ heat shock N-terminal domain-containing protein; Swiss-Prot: sp|Q9SR96|DNJ63_ARATH DnaJ protein ERDJ3A; TrEMBL-Plants: tr|I1KKH4|I1KKH4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0443700 LjG1.1_chr1 94145151 94148988 +
6 domain predictions
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LotjaGi1g1v0564700.1
n.a. Chaperone protein dnaJ, putative; TAIR: AT4G39150.1 DNAJ heat shock N-terminal domain-containing protein; Swiss-Prot: sp|Q8GYX8|DNJ10_ARATH Chaperone protein dnaJ 10; TrEMBL-Plants: tr|C6TI60|C6TI60_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0564700 LjG1.1_chr1 109798802 109804071 -
6 domain predictions
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LotjaGi1g1v0610100.1
n.a. Chaperone protein dnaJ; TAIR: AT5G23240.1 DNAJ heat shock N-terminal domain-containing protein; Swiss-Prot: sp|B9DNJ9|DNAJ_STACT Chaperone protein DnaJ; TrEMBL-Plants: tr|I3SWE4|I3SWE4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0610100 LjG1.1_chr1 115435414 115438433 +
6 domain predictions
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LotjaGi1g1v0643000.1
n.a. Chaperone protein dnaJ; TAIR: AT5G18140.1 Chaperone DnaJ-domain superfamily protein; Swiss-Prot: sp|Q9SJZ7|DNJA6_ARATH Chaperone protein dnaJ A6, chloroplastic; TrEMBL-Plants: tr|A0A0S3RWF0|A0A0S3RWF0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0643000 LjG1.1_chr1 120018403 120021135 -
6 domain predictions
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LotjaGi1g1v0669900.1
n.a. DnaJ; TAIR: AT5G12430.1 Heat shock protein DnaJ with tetratricopeptide repeat-containing protein; Swiss-Prot: sp|Q5R8D8|DNJC7_PONAB DnaJ homolog subfamily C member 7; TrEMBL-Plants: tr|A0A0S3RX84|A0A0S3RX84_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0669900 LjG1.1_chr1 123346067 123356263 +
6 domain predictions
 –