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The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.
We have found 253 results. Now displaying 3 of 6 with 50 rows per page. This search has taken 5.647s to perform.
Transcript | Name | Description | Chr | Start | End | Strand | Domain predictions | GO predictions |
---|---|---|---|---|---|---|---|---|
n.a. | PREDICTED: pathogenesis-related homeodomain protein-like [Cicer arietinum] gi|502085745|ref|XP_004487993.1| | chr6 | 15869131 | 15881270 | - | – | ||
n.a. | PREDICTED: protein AF-17-like isoform X2 [Cicer arietinum] gi|502166098|ref|XP_004513789.1| | chr6 | 18095197 | 18097377 | + | – | ||
n.a. | PREDICTED: protein AF-17-like isoform X1 [Cicer arietinum] gi|502166095|ref|XP_004513788.1| | chr6 | 18095197 | 18097377 | + | – | ||
n.a. | PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Glycine max] gi|356557797|ref|XP_003547197.1| | chr6 | 22285946 | 22290603 | - | – | ||
n.a. | E3 ubiquitin-protein ligase orthrus-like protein; TAIR: AT1G57820.1 Zinc finger (C3HC4-type RING finger) family protein; Swiss-Prot: sp|Q8VYZ0|ORTH2_ARATH E3 ubiquitin-protein ligase ORTHRUS 2; TrEMBL-Plants: tr|I1JJU5|I1JJU5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0004400 | LjG1.1_chr1 | 804738 | 813954 | + | – | ||
n.a. | E3 ubiquitin-protein ligase orthrus-like protein; TAIR: AT1G57820.1 Zinc finger (C3HC4-type RING finger) family protein; Swiss-Prot: sp|Q8VYZ0|ORTH2_ARATH E3 ubiquitin-protein ligase ORTHRUS 2; TrEMBL-Plants: tr|I1JJU5|I1JJU5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0004400 | LjG1.1_chr1 | 806178 | 813954 | + | – | ||
n.a. | Potyviral VPg interacting protein 2; TAIR: AT5G48160.1 potyvirus VPg interacting protein (DUF1423); Swiss-Prot: sp|Q84N37|PVIP_PEA OBERON-like protein; TrEMBL-Plants: tr|A0A151S028|A0A151S028_CAJCA Protein VERNALIZATION INSENSITIVE 3; Found in the gene: LotjaGi1g1v0008900 | LjG1.1_chr1 | 1156339 | 1159987 | - | – | ||
n.a. | Potyviral VPg interacting protein 2; TAIR: AT5G48160.1 potyvirus VPg interacting protein (DUF1423); Swiss-Prot: sp|Q84N37|PVIP_PEA OBERON-like protein; TrEMBL-Plants: tr|A0A151S028|A0A151S028_CAJCA Protein VERNALIZATION INSENSITIVE 3; Found in the gene: LotjaGi1g1v0008900 | LjG1.1_chr1 | 1156880 | 1159173 | - | – | ||
n.a. | Enhanced downy mildew 2, putative; TAIR: AT5G55390.1 ENHANCED DOWNY MILDEW 2; Swiss-Prot: sp|F4K3G5|EDM2_ARATH Protein ENHANCED DOWNY MILDEW 2; TrEMBL-Plants: tr|K7KBJ1|K7KBJ1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0022500_LC | LjG1.1_chr1 | 2762138 | 2769303 | + | – | ||
n.a. | PHD finger protein family; TAIR: AT1G66170.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q7X6Y7|MMD1_ARATH PHD finger protein MALE MEIOCYTE DEATH 1; TrEMBL-Plants: tr|A0A151RBP6|A0A151RBP6_CAJCA PHD finger protein family; Found in the gene: LotjaGi1g1v0096400 | LjG1.1_chr1 | 14600120 | 14603294 | + | – | ||
n.a. | RING/FYVE/PHD zinc finger protein; TAIR: AT5G58610.4 PHD finger transcription factor; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|G7JZJ8|G7JZJ8_MEDTR PHD zinc finger protein; Found in the gene: LotjaGi1g1v0118400_LC | LjG1.1_chr1 | 18696963 | 18703992 | - | – | ||
n.a. | PHD finger protein family; TAIR: AT2G40770.1 RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein; Swiss-Prot: sp|Q149N8|SHPRH_HUMAN E3 ubiquitin-protein ligase SHPRH; TrEMBL-Plants: tr|A0A1J7GV35|A0A1J7GV35_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0130300_LC | LjG1.1_chr1 | 20932164 | 20941645 | + | – | ||
n.a. | E3 ubiquitin-protein ligase SHPRH; TAIR: AT2G40770.1 RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein; Swiss-Prot: sp|Q149N8|SHPRH_HUMAN E3 ubiquitin-protein ligase SHPRH; TrEMBL-Plants: tr|I1JH54|I1JH54_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0131200 | LjG1.1_chr1 | 21048411 | 21074533 | + | – | ||
n.a. | E3 ubiquitin-protein ligase SHPRH; TAIR: AT2G40770.1 RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein; Swiss-Prot: sp|Q149N8|SHPRH_HUMAN E3 ubiquitin-protein ligase SHPRH; TrEMBL-Plants: tr|I1JH54|I1JH54_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0131200 | LjG1.1_chr1 | 21048478 | 21070075 | + | – | ||
n.a. | E3 ubiquitin-protein ligase SHPRH; TAIR: AT2G40770.1 RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein; Swiss-Prot: sp|Q149N8|SHPRH_HUMAN E3 ubiquitin-protein ligase SHPRH; TrEMBL-Plants: tr|I1JH54|I1JH54_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0131200 | LjG1.1_chr1 | 21049077 | 21069777 | + | – | ||
n.a. | PHD-finger protein; TAIR: AT1G77250.1 RING/FYVE/PHD-type zinc finger family protein; Swiss-Prot: sp|Q6ZJM9|EHD3_ORYSJ PHD finger protein EHD3; TrEMBL-Plants: tr|A0A1J7H7M4|A0A1J7H7M4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0162700 | LjG1.1_chr1 | 30558645 | 30567712 | + | – | ||
n.a. | Histone-lysine N-methyltransferase; TAIR: AT5G24330.1 TRITHORAX-RELATED PROTEIN 6; Swiss-Prot: sp|Q9FNE9|ATXR6_ARATH Histone-lysine N-methyltransferase ATXR6; TrEMBL-Plants: tr|V7B478|V7B478_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0165100 | LjG1.1_chr1 | 31109825 | 31112842 | + | – | ||
n.a. | Histone-lysine N-methyltransferase; TAIR: AT4G27910.1 SET domain protein 16; Swiss-Prot: sp|Q9SUE7|ATX4_ARATH Histone-lysine N-methyltransferase ATX4; TrEMBL-Plants: tr|A0A0B2QWA4|A0A0B2QWA4_GLYSO Histone-lysine N-methyltransferase; Found in the gene: LotjaGi1g1v0226000_LC | LjG1.1_chr1 | 52330652 | 52343925 | + | – | ||
n.a. | Histone-lysine N-methyltransferase; TAIR: AT5G53430.1 SET domain group 29; Swiss-Prot: sp|Q8GZ42|ATX5_ARATH Histone-lysine N-methyltransferase ATX5; TrEMBL-Plants: tr|A0A151TYG2|A0A151TYG2_CAJCA Histone-lysine N-methyltransferase; Found in the gene: LotjaGi1g1v0226000_LC | LjG1.1_chr1 | 52330652 | 52343925 | + | – | ||
n.a. | Histone-lysine N-methyltransferase; TAIR: AT4G27910.1 SET domain protein 16; Swiss-Prot: sp|Q9SUE7|ATX4_ARATH Histone-lysine N-methyltransferase ATX4; TrEMBL-Plants: tr|I1JYS9|I1JYS9_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi1g1v0226000_LC | LjG1.1_chr1 | 52330766 | 52338763 | + | – | ||
n.a. | Histone-lysine N-methyltransferase; TAIR: AT5G53430.1 SET domain group 29; Swiss-Prot: sp|Q8GZ42|ATX5_ARATH Histone-lysine N-methyltransferase ATX5; TrEMBL-Plants: tr|A0A151TYG2|A0A151TYG2_CAJCA Histone-lysine N-methyltransferase; Found in the gene: LotjaGi1g1v0226000_LC | LjG1.1_chr1 | 52330766 | 52338763 | + | – | ||
n.a. | Phd finger protein, putative; TAIR: AT1G77800.1 PHD finger family protein; Swiss-Prot: sp|Q7YZH1|RNO_DROME PHD finger protein rhinoceros; TrEMBL-Plants: tr|A0A0R0KNZ6|A0A0R0KNZ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0249800 | LjG1.1_chr1 | 60044466 | 60056959 | - | – | ||
n.a. | RING/FYVE/PHD zinc finger protein, putative; TAIR: AT3G02890.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|O14686|KMT2D_HUMAN Histone-lysine N-methyltransferase 2D; TrEMBL-Plants: tr|K7LN08|K7LN08_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0265300_LC | LjG1.1_chr1 | 64821040 | 64829748 | + | – | ||
n.a. | RING/FYVE/PHD zinc finger protein, putative; TAIR: AT3G02890.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|O14686|KMT2D_HUMAN Histone-lysine N-methyltransferase 2D; TrEMBL-Plants: tr|K7LN08|K7LN08_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0265300_LC | LjG1.1_chr1 | 64821125 | 64829062 | + | – | ||
n.a. | RING/FYVE/PHD zinc finger protein, putative; TAIR: AT3G02890.3 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|O14686|KMT2D_HUMAN Histone-lysine N-methyltransferase 2D; TrEMBL-Plants: tr|A0A1J7H449|A0A1J7H449_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0265300_LC | LjG1.1_chr1 | 64824676 | 64826679 | + | – | ||
n.a. | Histone-lysine N-methyltransferase; TAIR: AT5G53430.1 SET domain group 29; Swiss-Prot: sp|Q8GZ42|ATX5_ARATH Histone-lysine N-methyltransferase ATX5; TrEMBL-Plants: tr|I1JYS9|I1JYS9_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi1g1v0284200 | LjG1.1_chr1 | 69176904 | 69188234 | - | – | ||
n.a. | Histone-lysine N-methyltransferase; TAIR: AT5G09790.1 TRITHORAX-RELATED PROTEIN 5; Swiss-Prot: sp|B9RU15|ATXR5_RICCO Probable Histone-lysine N-methyltransferase ATXR5; TrEMBL-Plants: tr|I1JY36|I1JY36_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0317200 | LjG1.1_chr1 | 76429484 | 76436232 | + | – | ||
n.a. | PHD finger alfin-like protein; TAIR: AT5G20510.1 alfin-like 5; Swiss-Prot: sp|Q5XEM9|ALFL5_ARATH PHD finger protein ALFIN-LIKE 5; TrEMBL-Plants: tr|I3T3M7|I3T3M7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0369600 | LjG1.1_chr1 | 84778256 | 84783484 | - | – | ||
n.a. | PHD finger alfin-like protein; TAIR: AT5G20510.1 alfin-like 5; Swiss-Prot: sp|Q5XEM9|ALFL5_ARATH PHD finger protein ALFIN-LIKE 5; TrEMBL-Plants: tr|I3T3M7|I3T3M7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0369600 | LjG1.1_chr1 | 84778775 | 84779440 | - | – | ||
n.a. | PHD finger alfin-like protein; TAIR: AT5G20510.1 alfin-like 5; Swiss-Prot: sp|Q5XEM9|ALFL5_ARATH PHD finger protein ALFIN-LIKE 5; TrEMBL-Plants: tr|I3T3M7|I3T3M7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0369600 | LjG1.1_chr1 | 84778775 | 84783173 | - | – | ||
n.a. | Chromatin remodeling factor CHD3 (Pickle); TAIR: AT2G25170.2 chromatin remodeling factor CHD3 (PICKLE); Swiss-Prot: sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE; TrEMBL-Plants: tr|A0A151TT78|A0A151TT78_CAJCA CHD3-type chromatin-remodeling factor PICKLE; Found in the gene: LotjaGi1g1v0378800 | LjG1.1_chr1 | 85909793 | 85928018 | + | – | ||
n.a. | Chromatin remodeling factor CHD3 (Pickle); TAIR: AT2G25170.1 chromatin remodeling factor CHD3 (PICKLE); Swiss-Prot: sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE; TrEMBL-Plants: tr|A0A151TT78|A0A151TT78_CAJCA CHD3-type chromatin-remodeling factor PICKLE; Found in the gene: LotjaGi1g1v0378800 | LjG1.1_chr1 | 85909793 | 85928018 | + | – | ||
n.a. | Chromatin remodeling factor CHD3 (Pickle); TAIR: AT2G25170.2 chromatin remodeling factor CHD3 (PICKLE); Swiss-Prot: sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE; TrEMBL-Plants: tr|A0A151TT78|A0A151TT78_CAJCA CHD3-type chromatin-remodeling factor PICKLE; Found in the gene: LotjaGi1g1v0378800 | LjG1.1_chr1 | 85909807 | 85928015 | + | – | ||
n.a. | PHD finger alfin-like protein; TAIR: AT5G05610.1 alfin-like 1; Swiss-Prot: sp|A2Y0Q2|ALFL1_ORYSI PHD finger protein ALFIN-LIKE 1; TrEMBL-Plants: tr|C6T7X8|C6T7X8_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0441700 | LjG1.1_chr1 | 93846996 | 93853034 | + | – | ||
n.a. | PHD finger alfin-like protein; TAIR: AT5G05610.1 alfin-like 1; Swiss-Prot: sp|Q9FFF5|ALFL1_ARATH PHD finger protein ALFIN-LIKE 1; TrEMBL-Plants: tr|C6T7X8|C6T7X8_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0441700 | LjG1.1_chr1 | 93850981 | 93852367 | + | – | ||
n.a. | Histone-lysine N-methyltransferase; TAIR: AT1G05830.1 trithorax-like protein 2; Swiss-Prot: sp|P0CB22|ATX2_ARATH Histone-lysine N-methyltransferase ATX2; TrEMBL-Plants: tr|A0A151TCT2|A0A151TCT2_CAJCA Histone-lysine N-methyltransferase ATX2; Found in the gene: LotjaGi1g1v0529500 | LjG1.1_chr1 | 105619940 | 105654969 | - | – | ||
n.a. | Histone-lysine N-methyltransferase; TAIR: AT1G05830.1 trithorax-like protein 2; Swiss-Prot: sp|P0CB22|ATX2_ARATH Histone-lysine N-methyltransferase ATX2; TrEMBL-Plants: tr|A0A151TCT2|A0A151TCT2_CAJCA Histone-lysine N-methyltransferase ATX2; Found in the gene: LotjaGi1g1v0529500 | LjG1.1_chr1 | 105622284 | 105654909 | - | – | ||
n.a. | Histone-lysine N-methyltransferase; TAIR: AT1G05830.1 trithorax-like protein 2; Swiss-Prot: sp|P0CB22|ATX2_ARATH Histone-lysine N-methyltransferase ATX2; TrEMBL-Plants: tr|A0A151TCT2|A0A151TCT2_CAJCA Histone-lysine N-methyltransferase ATX2; Found in the gene: LotjaGi1g1v0529500 | LjG1.1_chr1 | 105628474 | 105654797 | - | – | ||
n.a. | Zinc finger, PHD-finger; TAIR: AT2G19260.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1; TrEMBL-Plants: tr|I1K6W5|I1K6W5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0556600 | LjG1.1_chr1 | 108866412 | 108876146 | - | – | ||
n.a. | Zinc finger, PHD-finger; TAIR: AT2G19260.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1; TrEMBL-Plants: tr|K7KHD4|K7KHD4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0556600 | LjG1.1_chr1 | 108866441 | 108876031 | - | – | ||
n.a. | Zinc finger CCCH domain protein; TAIR: AT2G16485.2 GW repeat- and PHD finger-containing protein NERD; Swiss-Prot: sp|Q9SIV5|C3H19_ARATH Zinc finger CCCH domain-containing protein 19; TrEMBL-Plants: tr|A0A0B2RGJ5|A0A0B2RGJ5_GLYSO Zinc finger CCCH domain-containing protein 44; Found in the gene: LotjaGi1g1v0563100 | LjG1.1_chr1 | 109564605 | 109577030 | - | – | ||
n.a. | BAH-PHD domain-containing protein; TAIR: AT4G39100.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|Q9FEN9|SHL_ARATH Chromatin remodeling protein SHL; TrEMBL-Plants: tr|I1K738|I1K738_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0564200 | LjG1.1_chr1 | 109757002 | 109760141 | - | – | ||
n.a. | PHD finger protein ING; TAIR: AT1G54390.3 PHD finger protein-like protein; Swiss-Prot: sp|B3H615|ING2_ARATH PHD finger protein ING2; TrEMBL-Plants: tr|I3ST78|I3ST78_LOTJA PHD finger protein ING; Found in the gene: LotjaGi1g1v0642000 | LjG1.1_chr1 | 119951839 | 119956984 | + | – | ||
n.a. | RING/FYVE/PHD zinc finger protein; TAIR: AT2G36720.1 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|K7MZ48|K7MZ48_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0683900 | LjG1.1_chr1 | 125085573 | 125094704 | + | – | ||
n.a. | chromatin remodeling factor; TAIR: AT1G08060.1 ATP-dependent helicase family protein; Swiss-Prot: sp|Q9M658|MOM1_ARATH Helicase protein MOM1; TrEMBL-Plants: tr|I1JPN1|I1JPN1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0690100 | LjG1.1_chr1 | 125764441 | 125779667 | + | – | ||
n.a. | chromatin remodeling factor; TAIR: AT1G08060.1 ATP-dependent helicase family protein; Swiss-Prot: sp|Q9M658|MOM1_ARATH Helicase protein MOM1; TrEMBL-Plants: tr|I1JPN1|I1JPN1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0690100 | LjG1.1_chr1 | 125764500 | 125779323 | + | – | ||
n.a. | Cysteine/histidine-rich C1 domain protein; TAIR: AT2G27660.1 Cysteine/Histidine-rich C1 domain family protein; Swiss-Prot: sp|Q8VZQ0|NRX3_ARATH Probable nucleoredoxin 3; TrEMBL-Plants: tr|G7KVE7|G7KVE7_MEDTR Cysteine/histidine-rich C1 domain protein; Found in the gene: LotjaGi1g1v0726800 | LjG1.1_chr1 | 129769477 | 129773051 | + | – | ||
n.a. | RING/U-box superfamily protein; TAIR: AT3G05670.1 RING/U-box protein; Swiss-Prot: sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1; TrEMBL-Plants: tr|A0A1J7GZV4|A0A1J7GZV4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0746800 | LjG1.1_chr1 | 131982397 | 131986302 | + | – | ||
n.a. | Zinc finger CCCH domain protein; TAIR: AT5G08430.2 SWIB/MDM2 and Plus-3 and GYF domain-containing protein; Swiss-Prot: sp|Q9FT92|Y5843_ARATH Uncharacterized protein At5g08430; TrEMBL-Plants: tr|K7KGZ1|K7KGZ1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0784500 | LjG1.1_chr1 | 135719097 | 135726390 | + | – | ||
n.a. | RING/FYVE/PHD zinc finger protein, putative; TAIR: AT1G43770.2 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|A8DZJ1|BAZ1B_XENLA Tyrosine-protein kinase BAZ1B; TrEMBL-Plants: tr|A0A151R0D2|A0A151R0D2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0135600 | LjG1.1_chr2 | 49785407 | 49799761 | + | – |