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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002129
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We have found 47 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.047s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0084619.1
n.a. Histidine decarboxylase [Medicago truncatula] gi|357443697|ref|XP_003592126.1| chr0 33700083 33702156 +
2 domain predictions
3 GO terms
Lj0g3v0209699.1
n.a. PREDICTED: histidine decarboxylase-like [Glycine max] gi|356534053|ref|XP_003535572.1| chr0 105189788 105192122 +
2 domain predictions
3 GO terms
Lj0g3v0211149.1
n.a. PREDICTED: tyrosine/DOPA decarboxylase 2-like [Glycine max] gi|356522542|ref|XP_003529905.1| chr0 106312143 106313663 -
2 domain predictions
3 GO terms
Lj0g3v0315589.1
n.a. PREDICTED: histidine decarboxylase-like [Glycine max] gi|356534053|ref|XP_003535572.1| chr0 164728885 164730589 -
2 domain predictions
3 GO terms
Lj1g3v4528440.1
n.a. PREDICTED: tyrosine decarboxylase 1-like [Cicer arietinum] gi|502110253|ref|XP_004493836.1| chr1 53348655 53354755 -
2 domain predictions
3 GO terms
Lj2g3v0632430.1
n.a. PREDICTED: glutamate decarboxylase-like [Glycine max] gi|356531096|ref|XP_003534114.1| chr2 9227512 9231740 +
2 domain predictions
3 GO terms
Lj2g3v2532270.1
n.a. PREDICTED: glutamate decarboxylase 1-like [Glycine max] gi|356553243|ref|XP_003544967.1| chr2 34977616 34981738 +
2 domain predictions
3 GO terms
Lj3g3v0116140.1
n.a. Histidine decarboxylase [Medicago truncatula] gi|357443697|ref|XP_003592126.1| chr3 880054 882747 -
2 domain predictions
3 GO terms
Lj4g3v0166240.1
n.a. PREDICTED: glutamate decarboxylase 1-like [Glycine max] gi|356525016|ref|XP_003531123.1| chr4 2035322 2038587 +
2 domain predictions
3 GO terms
Lj4g3v0166320.1
n.a. PREDICTED: glutamate decarboxylase 1-like [Glycine max] gi|356525016|ref|XP_003531123.1| chr4 2071285 2073830 +
2 domain predictions
3 GO terms
Lj4g3v0461370.1
n.a. PREDICTED: histidine decarboxylase-like [Glycine max] gi|356534053|ref|XP_003535572.1| chr4 6785590 6787674 -
2 domain predictions
3 GO terms
Lj6g3v0393220.1
n.a. glutamate decarboxylase [Glycine max] gi|157890422|dbj|BAF80895.1| chr6 3616400 3622565 +
2 domain predictions
3 GO terms
Lj6g3v0393230.1
n.a. glutamate decarboxylase [Glycine max] gi|157890422|dbj|BAF80895.1| chr6 3616682 3622297 +
2 domain predictions
3 GO terms
Lj6g3v1078040.3
n.a. PREDICTED: histidine decarboxylase-like [Glycine max] gi|356534053|ref|XP_003535572.1| chr6 12673162 12674350 -
2 domain predictions
3 GO terms
Lj6g3v1679480.1
n.a. PREDICTED: tyrosine/DOPA decarboxylase 2-like [Glycine max] gi|356558045|ref|XP_003547319.1| chr6 18698259 18700169 -
2 domain predictions
3 GO terms
Lj6g3v2222040.1
n.a. PREDICTED: histidine decarboxylase-like [Glycine max] gi|356558589|ref|XP_003547587.1| chr6 25956395 25961032 +
2 domain predictions
3 GO terms
LotjaGi1g1v0099000.1
n.a. Glutamate decarboxylase; TAIR: AT5G17330.1 glutamate decarboxylase; Swiss-Prot: sp|Q42521|DCE1_ARATH Glutamate decarboxylase 1; TrEMBL-Plants: tr|I1MBS2|I1MBS2_SOYBN Glutamate decarboxylase; Found in the gene: LotjaGi1g1v0099000 LjG1.1_chr1 15088470 15092773 -
2 domain predictions
3 GO terms
LotjaGi1g1v0099100_LC.1
n.a. Glutamate decarboxylase; TAIR: AT5G17330.1 glutamate decarboxylase; Swiss-Prot: sp|Q42521|DCE1_ARATH Glutamate decarboxylase 1; TrEMBL-Plants: tr|A0A059BU55|A0A059BU55_EUCGR Glutamate decarboxylase; Found in the gene: LotjaGi1g1v0099100_LC LjG1.1_chr1 15111755 15114636 -
2 domain predictions
3 GO terms
LotjaGi1g1v0099100_LC.2
n.a. Glutamate decarboxylase; TAIR: AT5G17330.1 glutamate decarboxylase; Swiss-Prot: sp|Q42521|DCE1_ARATH Glutamate decarboxylase 1; TrEMBL-Plants: tr|I1MBS2|I1MBS2_SOYBN Glutamate decarboxylase; Found in the gene: LotjaGi1g1v0099100_LC LjG1.1_chr1 15113679 15114376 -
2 domain predictions
3 GO terms
LotjaGi1g1v0531300.1
n.a. Glutamate decarboxylase; TAIR: AT1G27980.1 dihydrosphingosine phosphate lyase; Swiss-Prot: sp|Q9C509|SGPL_ARATH Sphingosine-1-phosphate lyase; TrEMBL-Plants: tr|I1N505|I1N505_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0531300 LjG1.1_chr1 105828881 105835983 +
2 domain predictions
3 GO terms
LotjaGi1g1v0703100.1
n.a. Tyrosine decarboxylase family protein; TAIR: AT2G20340.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q8RY79|TYDC1_ARATH Tyrosine decarboxylase 1; TrEMBL-Plants: tr|G7KYF4|G7KYF4_MEDTR Tyrosine/DOPA decarboxylase; Found in the gene: LotjaGi1g1v0703100 LjG1.1_chr1 127134756 127140999 +
2 domain predictions
3 GO terms
LotjaGi2g1v0185300.1
n.a. Glutamate decarboxylase; TAIR: AT3G17760.1 glutamate decarboxylase 5; Swiss-Prot: sp|P54767|DCE_SOLLC Glutamate decarboxylase; TrEMBL-Plants: tr|I1L3Z2|I1L3Z2_SOYBN Glutamate decarboxylase; Found in the gene: LotjaGi2g1v0185300 LjG1.1_chr2 61140101 61144472 +
2 domain predictions
3 GO terms
LotjaGi3g1v0391700.1
n.a. Tyrosine decarboxylase; TAIR: AT2G20340.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|P54769|TYDC2_PAPSO Tyrosine/DOPA decarboxylase 2; TrEMBL-Plants: tr|A0A0B2R021|A0A0B2R021_GLYSO Tyrosine/DOPA decarboxylase 2; Found in the gene: LotjaGi3g1v0391700 LjG1.1_chr3 79013868 79016176 -
2 domain predictions
3 GO terms
LotjaGi4g1v0016800.1
n.a. Glutamate decarboxylase; TAIR: AT5G17330.1 glutamate decarboxylase; Swiss-Prot: sp|Q42521|DCE1_ARATH Glutamate decarboxylase 1; TrEMBL-Plants: tr|C6TF12|C6TF12_SOYBN Glutamate decarboxylase; Found in the gene: LotjaGi4g1v0016800 LjG1.1_chr4 2158221 2161765 +
2 domain predictions
3 GO terms
LotjaGi4g1v0016800.2
n.a. Glutamate decarboxylase; TAIR: AT2G02010.1 glutamate decarboxylase 4; Swiss-Prot: sp|Q9ZPS3|DCE4_ARATH Glutamate decarboxylase 4; TrEMBL-Plants: tr|C6TF12|C6TF12_SOYBN Glutamate decarboxylase; Found in the gene: LotjaGi4g1v0016800 LjG1.1_chr4 2158292 2161740 +
2 domain predictions
3 GO terms
LotjaGi4g1v0016800.3
n.a. Glutamate decarboxylase; TAIR: AT5G17330.1 glutamate decarboxylase; Swiss-Prot: sp|Q42521|DCE1_ARATH Glutamate decarboxylase 1; TrEMBL-Plants: tr|A0A0S3R0U0|A0A0S3R0U0_PHAAN Glutamate decarboxylase; Found in the gene: LotjaGi4g1v0016800 LjG1.1_chr4 2158292 2161740 +
2 domain predictions
3 GO terms
LotjaGi4g1v0017100.1
n.a. Glutamate decarboxylase; TAIR: AT5G17330.1 glutamate decarboxylase; Swiss-Prot: sp|Q42521|DCE1_ARATH Glutamate decarboxylase 1; TrEMBL-Plants: tr|C6TF12|C6TF12_SOYBN Glutamate decarboxylase; Found in the gene: LotjaGi4g1v0017100 LjG1.1_chr4 2193865 2196927 +
2 domain predictions
3 GO terms
LotjaGi4g1v0057000.1
n.a. Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A151S6Z1|A0A151S6Z1_CAJCA Histidine decarboxylase; Found in the gene: LotjaGi4g1v0057000 LjG1.1_chr4 6810233 6812619 -
2 domain predictions
3 GO terms
LotjaGi5g1v0292300.1
n.a. Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|G7ID03|G7ID03_MEDTR Serine decarboxylase; Found in the gene: LotjaGi5g1v0292300 LjG1.1_chr5 60935647 60939134 -
2 domain predictions
3 GO terms
LotjaGi5g1v0292300.2
n.a. Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|G7ID03|G7ID03_MEDTR Serine decarboxylase; Found in the gene: LotjaGi5g1v0292300 LjG1.1_chr5 60935724 60938205 -
2 domain predictions
3 GO terms
LotjaGi5g1v0292300.3
n.a. Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A151S6Z1|A0A151S6Z1_CAJCA Histidine decarboxylase; Found in the gene: LotjaGi5g1v0292300 LjG1.1_chr5 60935755 60938096 -
2 domain predictions
3 GO terms
LotjaGi5g1v0292600.1
n.a. Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|G7ID03|G7ID03_MEDTR Serine decarboxylase; Found in the gene: LotjaGi5g1v0292600 LjG1.1_chr5 60962661 60965429 -
2 domain predictions
3 GO terms
LotjaGi5g1v0292600.2
n.a. Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|G7ID03|G7ID03_MEDTR Serine decarboxylase; Found in the gene: LotjaGi5g1v0292600 LjG1.1_chr5 60962738 60965239 -
2 domain predictions
3 GO terms
LotjaGi5g1v0292800.1
n.a. Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A151S6Z1|A0A151S6Z1_CAJCA Histidine decarboxylase; Found in the gene: LotjaGi5g1v0292800 LjG1.1_chr5 60988447 60991065 -
2 domain predictions
3 GO terms
LotjaGi5g1v0292900.1
n.a. Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A151S6Z1|A0A151S6Z1_CAJCA Histidine decarboxylase; Found in the gene: LotjaGi5g1v0292900 LjG1.1_chr5 61004802 61007567 +
2 domain predictions
3 GO terms
LotjaGi5g1v0292900.2
n.a. Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A151S6Z1|A0A151S6Z1_CAJCA Histidine decarboxylase; Found in the gene: LotjaGi5g1v0292900 LjG1.1_chr5 61004802 61029582 +
2 domain predictions
3 GO terms
LotjaGi5g1v0292900.3
n.a. Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A151S6Z1|A0A151S6Z1_CAJCA Histidine decarboxylase; Found in the gene: LotjaGi5g1v0292900 LjG1.1_chr5 61004919 61029590 +
2 domain predictions
3 GO terms
LotjaGi5g1v0292900.4
n.a. Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A151S6Z1|A0A151S6Z1_CAJCA Histidine decarboxylase; Found in the gene: LotjaGi5g1v0292900 LjG1.1_chr5 61027208 61030965 +
2 domain predictions
3 GO terms
LotjaGi6g1v0052700.1
n.a. Glutamate decarboxylase; TAIR: AT5G17330.1 glutamate decarboxylase; Swiss-Prot: sp|Q42521|DCE1_ARATH Glutamate decarboxylase 1; TrEMBL-Plants: tr|V7BM00|V7BM00_PHAVU Glutamate decarboxylase; Found in the gene: LotjaGi6g1v0052700 LjG1.1_chr6 9416987 9423633 +
2 domain predictions
3 GO terms
LotjaGi6g1v0052700.2
n.a. Glutamate decarboxylase; TAIR: AT5G17330.1 glutamate decarboxylase; Swiss-Prot: sp|Q42521|DCE1_ARATH Glutamate decarboxylase 1; TrEMBL-Plants: tr|A0A0L9VCS2|A0A0L9VCS2_PHAAN Glutamate decarboxylase; Found in the gene: LotjaGi6g1v0052700 LjG1.1_chr6 9420745 9422752 +
2 domain predictions
3 GO terms
LotjaGi6g1v0203300.1
n.a. Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A151S6Z1|A0A151S6Z1_CAJCA Histidine decarboxylase; Found in the gene: LotjaGi6g1v0203300 LjG1.1_chr6 50065269 50067827 -
2 domain predictions
3 GO terms
LotjaGi6g1v0274400.1
n.a. Tyrosine decarboxylase; TAIR: AT2G20340.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|P54769|TYDC2_PAPSO Tyrosine/DOPA decarboxylase 2; TrEMBL-Plants: tr|V7AQJ2|V7AQJ2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0274400 LjG1.1_chr6 59129157 59131248 -
2 domain predictions
3 GO terms
LotjaGi6g1v0274400.2
n.a. Tyrosine decarboxylase; TAIR: AT2G20340.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|P54769|TYDC2_PAPSO Tyrosine/DOPA decarboxylase 2; TrEMBL-Plants: tr|V7AQJ2|V7AQJ2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0274400 LjG1.1_chr6 59129541 59131097 -
2 domain predictions
3 GO terms
LotjaGi6g1v0355800.1
n.a. Glutamate decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A151T7X1|A0A151T7X1_CAJCA Histidine decarboxylase; Found in the gene: LotjaGi6g1v0355800 LjG1.1_chr6 66749385 66754870 +
2 domain predictions
3 GO terms
LotjaGi6g1v0355800.2
n.a. Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A0B2QYV8|A0A0B2QYV8_GLYSO Histidine decarboxylase; Found in the gene: LotjaGi6g1v0355800 LjG1.1_chr6 66749461 66754422 +
2 domain predictions
3 GO terms
LotjaGi6g1v0355800.3
n.a. Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A0B2QYV8|A0A0B2QYV8_GLYSO Histidine decarboxylase; Found in the gene: LotjaGi6g1v0355800 LjG1.1_chr6 66750471 66753995 +
2 domain predictions
3 GO terms
LotjaGi6g1v0355800.4
n.a. Glutamate decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A0L9VG18|A0A0L9VG18_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0355800 LjG1.1_chr6 66751967 66753995 +
2 domain predictions
3 GO terms