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PF00282

Source: Pfam

Description

Pyridoxal-dependent decarboxylase conserved domain

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016831
Molecular function Carboxy-lyase activity Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound.
Subterm of
GO:0019752
Biological process Carboxylic acid metabolic process The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-).
Subterm of
GO:0030170
Molecular function Pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
Subterm of

Associated Lotus transcripts 47

Transcript Name Description Predicted domains Domain count
Lj0g3v0084619.1
– Histidine decarboxylase [Medicago truncatula] gi|357443697|ref|XP_003592126.1|
Domains
10
Lj0g3v0209699.1
– PREDICTED: histidine decarboxylase-like [Glycine max] gi|356534053|ref|XP_003535572.1|
Domains
8
Lj0g3v0211149.1
– PREDICTED: tyrosine/DOPA decarboxylase 2-like [Glycine max] gi|356522542|ref|XP_003529905.1|
Domains
15
Lj0g3v0315589.1
– PREDICTED: histidine decarboxylase-like [Glycine max] gi|356534053|ref|XP_003535572.1|
Domains
10
Lj1g3v4528440.1
– PREDICTED: tyrosine decarboxylase 1-like [Cicer arietinum] gi|502110253|ref|XP_004493836.1|
Domains
16
Lj2g3v0632430.1
– PREDICTED: glutamate decarboxylase-like [Glycine max] gi|356531096|ref|XP_003534114.1|
Domains
11
Lj2g3v2532270.1
– PREDICTED: glutamate decarboxylase 1-like [Glycine max] gi|356553243|ref|XP_003544967.1|
Domains
10
Lj3g3v0116140.1
– Histidine decarboxylase [Medicago truncatula] gi|357443697|ref|XP_003592126.1|
Domains
10
Lj4g3v0166240.1
– PREDICTED: glutamate decarboxylase 1-like [Glycine max] gi|356525016|ref|XP_003531123.1|
Domains
11
Lj4g3v0166320.1
– PREDICTED: glutamate decarboxylase 1-like [Glycine max] gi|356525016|ref|XP_003531123.1|
Domains
10
Lj4g3v0461370.1
– PREDICTED: histidine decarboxylase-like [Glycine max] gi|356534053|ref|XP_003535572.1|
Domains
10
Lj6g3v0393220.1
– Glutamate decarboxylase [Glycine max] gi|157890422|dbj|BAF80895.1|
Domains
11
Lj6g3v0393230.1
– Glutamate decarboxylase [Glycine max] gi|157890422|dbj|BAF80895.1|
Domains
11
Lj6g3v1078040.3
– PREDICTED: histidine decarboxylase-like [Glycine max] gi|356534053|ref|XP_003535572.1|
Domains
10
Lj6g3v1679480.1
– PREDICTED: tyrosine/DOPA decarboxylase 2-like [Glycine max] gi|356558045|ref|XP_003547319.1|
Domains
15
Lj6g3v2222040.1
– PREDICTED: histidine decarboxylase-like [Glycine max] gi|356558589|ref|XP_003547587.1|
Domains
10
LotjaGi1g1v0099000.1
– Glutamate decarboxylase; TAIR: AT5G17330.1 glutamate decarboxylase; Swiss-Prot: sp|Q42521|DCE1_ARATH Glutamate decarboxylase 1; TrEMBL-Plants: tr|I1MBS2|I1MBS2_SOYBN Glutamate decarboxylase; Found in the gene: LotjaGi1g1v0099000
Domains
11
LotjaGi1g1v0099100_LC.1
– Glutamate decarboxylase; TAIR: AT5G17330.1 glutamate decarboxylase; Swiss-Prot: sp|Q42521|DCE1_ARATH Glutamate decarboxylase 1; TrEMBL-Plants: tr|A0A059BU55|A0A059BU55_EUCGR Glutamate decarboxylase; Found in the gene: LotjaGi1g1v0099100_LC
Domains
9
LotjaGi1g1v0099100_LC.2
– Glutamate decarboxylase; TAIR: AT5G17330.1 glutamate decarboxylase; Swiss-Prot: sp|Q42521|DCE1_ARATH Glutamate decarboxylase 1; TrEMBL-Plants: tr|I1MBS2|I1MBS2_SOYBN Glutamate decarboxylase; Found in the gene: LotjaGi1g1v0099100_LC
Domains
7
LotjaGi1g1v0531300.1
– Glutamate decarboxylase; TAIR: AT1G27980.1 dihydrosphingosine phosphate lyase; Swiss-Prot: sp|Q9C509|SGPL_ARATH Sphingosine-1-phosphate lyase; TrEMBL-Plants: tr|I1N505|I1N505_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0531300
Domains
13
LotjaGi1g1v0703100.1
– Tyrosine decarboxylase family protein; TAIR: AT2G20340.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q8RY79|TYDC1_ARATH Tyrosine decarboxylase 1; TrEMBL-Plants: tr|G7KYF4|G7KYF4_MEDTR Tyrosine/DOPA decarboxylase; Found in the gene: LotjaGi1g1v0703100
Domains
16
LotjaGi2g1v0185300.1
– Glutamate decarboxylase; TAIR: AT3G17760.1 glutamate decarboxylase 5; Swiss-Prot: sp|P54767|DCE_SOLLC Glutamate decarboxylase; TrEMBL-Plants: tr|I1L3Z2|I1L3Z2_SOYBN Glutamate decarboxylase; Found in the gene: LotjaGi2g1v0185300
Domains
12
LotjaGi3g1v0391700.1
– Tyrosine decarboxylase; TAIR: AT2G20340.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|P54769|TYDC2_PAPSO Tyrosine/DOPA decarboxylase 2; TrEMBL-Plants: tr|A0A0B2R021|A0A0B2R021_GLYSO Tyrosine/DOPA decarboxylase 2; Found in the gene: LotjaGi3g1v0391700
Domains
15
LotjaGi4g1v0016800.1
– Glutamate decarboxylase; TAIR: AT5G17330.1 glutamate decarboxylase; Swiss-Prot: sp|Q42521|DCE1_ARATH Glutamate decarboxylase 1; TrEMBL-Plants: tr|C6TF12|C6TF12_SOYBN Glutamate decarboxylase; Found in the gene: LotjaGi4g1v0016800
Domains
12
LotjaGi4g1v0016800.2
– Glutamate decarboxylase; TAIR: AT2G02010.1 glutamate decarboxylase 4; Swiss-Prot: sp|Q9ZPS3|DCE4_ARATH Glutamate decarboxylase 4; TrEMBL-Plants: tr|C6TF12|C6TF12_SOYBN Glutamate decarboxylase; Found in the gene: LotjaGi4g1v0016800
Domains
9
LotjaGi4g1v0016800.3
– Glutamate decarboxylase; TAIR: AT5G17330.1 glutamate decarboxylase; Swiss-Prot: sp|Q42521|DCE1_ARATH Glutamate decarboxylase 1; TrEMBL-Plants: tr|A0A0S3R0U0|A0A0S3R0U0_PHAAN Glutamate decarboxylase; Found in the gene: LotjaGi4g1v0016800
Domains
10
LotjaGi4g1v0017100.1
– Glutamate decarboxylase; TAIR: AT5G17330.1 glutamate decarboxylase; Swiss-Prot: sp|Q42521|DCE1_ARATH Glutamate decarboxylase 1; TrEMBL-Plants: tr|C6TF12|C6TF12_SOYBN Glutamate decarboxylase; Found in the gene: LotjaGi4g1v0017100
Domains
11
LotjaGi4g1v0057000.1
– Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A151S6Z1|A0A151S6Z1_CAJCA Histidine decarboxylase; Found in the gene: LotjaGi4g1v0057000
Domains
11
LotjaGi5g1v0292300.1
– Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|G7ID03|G7ID03_MEDTR Serine decarboxylase; Found in the gene: LotjaGi5g1v0292300
Domains
13
LotjaGi5g1v0292300.2
– Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|G7ID03|G7ID03_MEDTR Serine decarboxylase; Found in the gene: LotjaGi5g1v0292300
Domains
13
LotjaGi5g1v0292300.3
– Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A151S6Z1|A0A151S6Z1_CAJCA Histidine decarboxylase; Found in the gene: LotjaGi5g1v0292300
Domains
12
LotjaGi5g1v0292600.1
– Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|G7ID03|G7ID03_MEDTR Serine decarboxylase; Found in the gene: LotjaGi5g1v0292600
Domains
13
LotjaGi5g1v0292600.2
– Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|G7ID03|G7ID03_MEDTR Serine decarboxylase; Found in the gene: LotjaGi5g1v0292600
Domains
13
LotjaGi5g1v0292800.1
– Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A151S6Z1|A0A151S6Z1_CAJCA Histidine decarboxylase; Found in the gene: LotjaGi5g1v0292800
Domains
10
LotjaGi5g1v0292900.1
– Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A151S6Z1|A0A151S6Z1_CAJCA Histidine decarboxylase; Found in the gene: LotjaGi5g1v0292900
Domains
10
LotjaGi5g1v0292900.2
– Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A151S6Z1|A0A151S6Z1_CAJCA Histidine decarboxylase; Found in the gene: LotjaGi5g1v0292900
Domains
8
LotjaGi5g1v0292900.3
– Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A151S6Z1|A0A151S6Z1_CAJCA Histidine decarboxylase; Found in the gene: LotjaGi5g1v0292900
Domains
8
LotjaGi5g1v0292900.4
– Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A151S6Z1|A0A151S6Z1_CAJCA Histidine decarboxylase; Found in the gene: LotjaGi5g1v0292900
Domains
8
LotjaGi6g1v0052700.1
– Glutamate decarboxylase; TAIR: AT5G17330.1 glutamate decarboxylase; Swiss-Prot: sp|Q42521|DCE1_ARATH Glutamate decarboxylase 1; TrEMBL-Plants: tr|V7BM00|V7BM00_PHAVU Glutamate decarboxylase; Found in the gene: LotjaGi6g1v0052700
Domains
12
LotjaGi6g1v0052700.2
– Glutamate decarboxylase; TAIR: AT5G17330.1 glutamate decarboxylase; Swiss-Prot: sp|Q42521|DCE1_ARATH Glutamate decarboxylase 1; TrEMBL-Plants: tr|A0A0L9VCS2|A0A0L9VCS2_PHAAN Glutamate decarboxylase; Found in the gene: LotjaGi6g1v0052700
Domains
11
LotjaGi6g1v0203300.1
– Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A151S6Z1|A0A151S6Z1_CAJCA Histidine decarboxylase; Found in the gene: LotjaGi6g1v0203300
Domains
10
LotjaGi6g1v0274400.1
– Tyrosine decarboxylase; TAIR: AT2G20340.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|P54769|TYDC2_PAPSO Tyrosine/DOPA decarboxylase 2; TrEMBL-Plants: tr|V7AQJ2|V7AQJ2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0274400
Domains
13
LotjaGi6g1v0274400.2
– Tyrosine decarboxylase; TAIR: AT2G20340.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|P54769|TYDC2_PAPSO Tyrosine/DOPA decarboxylase 2; TrEMBL-Plants: tr|V7AQJ2|V7AQJ2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0274400
Domains
15
LotjaGi6g1v0355800.1
– Glutamate decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A151T7X1|A0A151T7X1_CAJCA Histidine decarboxylase; Found in the gene: LotjaGi6g1v0355800
Domains
12
LotjaGi6g1v0355800.2
– Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A0B2QYV8|A0A0B2QYV8_GLYSO Histidine decarboxylase; Found in the gene: LotjaGi6g1v0355800
Domains
10
LotjaGi6g1v0355800.3
– Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A0B2QYV8|A0A0B2QYV8_GLYSO Histidine decarboxylase; Found in the gene: LotjaGi6g1v0355800
Domains
10
LotjaGi6g1v0355800.4
– Glutamate decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A0L9VG18|A0A0L9VG18_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0355800
Domains
12

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SSF53383 SUPERFAMILY 1 2.13