Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PTHR12313

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 27

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0263889.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max] gi\|356549928\|ref\|XP_003543342.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 IPR017907 IPR018957 NON_CYTOPLASMIC_DOMAIN PF00097 PS00518 PS50089 PTHR12313 PTHR12313:SF5 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd00162	17
Lj0g3v0282959.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: E3 ubiquitin-protein ligase RMA3-like isoform X1 [Cicer arietinum] gi\|502168188\|ref\|XP_004514340.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 IPR017907 NON_CYTOPLASMIC_DOMAIN PF13920 PS00518 PS50089 PTHR12313 PTHR12313:SF2 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd00162 mobidb-lite	17
Lj2g3v1815200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING finger protein [Medicago truncatula] gi\|357483249\|ref\|XP_003611911.1\|	Domains G3DSA:3.30.40.10 IPR001841 IPR013083 IPR017907 PF13920 PS00518 PS50089 PTHR12313 PTHR12313:SF12 SM00184 SSF57850 cd00162 mobidb-lite	13
Lj3g3v0463670.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING finger protein [Medicago truncatula] gi\|357470139\|ref\|XP_003605354.1\|	Domains G3DSA:3.30.40.10 IPR001841 IPR013083 PF13920 PS50089 PTHR12313 PTHR12313:SF14 SM00184 SSF57850 cd00162	10
Lj3g3v0463680.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING finger protein [Medicago truncatula] gi\|357470139\|ref\|XP_003605354.1\|	Domains G3DSA:3.30.40.10 IPR001841 IPR013083 PF13920 PS50089 PTHR12313 PTHR12313:SF0 SM00184 SSF57850 cd00162 mobidb-lite	11
Lj3g3v0928110.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING finger protein [Medicago truncatula] gi\|357470139\|ref\|XP_003605354.1\|	Domains G3DSA:3.30.40.10 IPR001841 IPR013083 PF13920 PS50089 PTHR12313 PTHR12313:SF0 SM00184 SSF57850 cd00162 mobidb-lite	11
Lj3g3v2809090.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max] gi\|356549928\|ref\|XP_003543342.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 IPR017907 IPR018957 NON_CYTOPLASMIC_DOMAIN PF00097 PS00518 PS50089 PTHR12313 PTHR12313:SF5 SM00184 SSF57850 TRANSMEMBRANE cd00162	16
Lj3g3v2809120.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max] gi\|356549928\|ref\|XP_003543342.1\|	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:3.30.40.10 IPR001841 IPR013083 IPR017907 IPR018957 NON_CYTOPLASMIC_DOMAIN PF00097 PS00518 PS50089 PTHR12313 PTHR12313:SF5 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd00162	18
Lj4g3v0451150.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max] gi\|356521355\|ref\|XP_003529322.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 IPR017907 IPR018957 NON_CYTOPLASMIC_DOMAIN PF00097 PS00518 PS50089 PTHR12313 PTHR12313:SF6 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd00162	17
Lj6g3v2041930.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max] gi\|356555252\|ref\|XP_003545948.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 IPR017907 IPR018957 NON_CYTOPLASMIC_DOMAIN PF00097 PS00518 PS50089 PTHR12313 PTHR12313:SF6 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd00162 mobidb-lite	18
LotjaGi1g1v0634000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING/U-box superfamily protein; TAIR: AT3G58030.1 RING/U-box superfamily protein; Swiss-Prot: sp\|Q5ZIR9\|RN185_CHICK E3 ubiquitin-protein ligase RNF185; TrEMBL-Plants: tr\|A0A151TU67\|A0A151TU67_CAJCA E3 ubiquitin-protein ligase RNF5; Found in the gene: LotjaGi1g1v0634000_LC	Domains G3DSA:3.30.40.10 IPR001841 IPR013083 IPR017907 PF13920 PS00518 PS50089 PTHR12313 PTHR12313:SF51 SM00184 SSF57850 cd16745 mobidb-lite	13
LotjaGi1g1v0727100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING/U-box superfamily protein; TAIR: AT3G58030.1 RING/U-box superfamily protein; Swiss-Prot: sp\|Q8GUK7\|RMA3_ARATH E3 ubiquitin-protein ligase RMA3; TrEMBL-Plants: tr\|I3SAZ4\|I3SAZ4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0727100	Domains G3DSA:3.30.40.10 IPR001841 IPR013083 IPR017907 PF13920 PS00518 PS50089 PTHR12313 PTHR12313:SF51 SM00184 SSF57850 cd16745 mobidb-lite	13
LotjaGi1g1v0727200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING/U-box superfamily protein; TAIR: AT2G42030.1 RING/U-box superfamily protein; Swiss-Prot: sp\|Q8GUK7\|RMA3_ARATH E3 ubiquitin-protein ligase RMA3; TrEMBL-Plants: tr\|A0A0L9U7P9\|A0A0L9U7P9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0727200	Domains G3DSA:3.30.40.10 IPR001841 IPR013083 IPR017907 PF13923 PS00518 PS50089 PTHR12313 PTHR12313:SF51 SM00184 SSF57850 cd16745 mobidb-lite	13
LotjaGi2g1v0394400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase; TAIR: AT2G23780.1 RING/U-box superfamily protein; Swiss-Prot: sp\|Q09463\|RNF5_CAEEL RING finger protein 5; TrEMBL-Plants: tr\|V7CIZ7\|V7CIZ7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0394400	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 IPR017907 NON_CYTOPLASMIC_DOMAIN PF13920 PS00518 PS50089 PTHR12313 PTHR12313:SF47 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd16745 mobidb-lite	17
LotjaGi2g1v0394400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase; TAIR: AT2G23780.1 RING/U-box superfamily protein; Swiss-Prot: sp\|Q09463\|RNF5_CAEEL RING finger protein 5; TrEMBL-Plants: tr\|V7CIZ7\|V7CIZ7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0394400	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 IPR017907 NON_CYTOPLASMIC_DOMAIN PF13920 PS00518 PS50089 PTHR12313 PTHR12313:SF47 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd16745 mobidb-lite	17
LotjaGi3g1v0048100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase; TAIR: AT4G03510.1 RING membrane-anchor 1; Swiss-Prot: sp\|Q6R567\|RMA1_CAPAN E3 ubiquitin-protein ligase RMA1H1; TrEMBL-Plants: tr\|I3SP62\|I3SP62_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0048100	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 IPR017907 NON_CYTOPLASMIC_DOMAIN PF13920 PS00518 PS50089 PTHR12313 PTHR12313:SF5 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd16745 mobidb-lite	17
LotjaGi3g1v0056500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase; TAIR: AT2G44410.1 RING/U-box superfamily protein; Swiss-Prot: sp\|Q6R567\|RMA1_CAPAN E3 ubiquitin-protein ligase RMA1H1; TrEMBL-Plants: tr\|G7JJK5\|G7JJK5_MEDTR Zinc finger, C3HC4 type (RING finger) protein; Found in the gene: LotjaGi3g1v0056500_LC	Domains G3DSA:3.30.40.10 IPR001841 IPR013083 PF13920 PS50089 PTHR12313 PTHR12313:SF0 SM00184 SSF57850	9
LotjaGi3g1v0056700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 Ubiquitin ligase family protein; TAIR: AT2G44410.1 RING/U-box superfamily protein; Swiss-Prot: sp\|P93030\|RMA2_ARATH E3 ubiquitin-protein ligase RMA2; TrEMBL-Plants: tr\|A0A072UIE9\|A0A072UIE9_MEDTR Zinc finger, C3HC4 type (RING finger) protein; Found in the gene: LotjaGi3g1v0056700	Domains G3DSA:3.30.40.10 IPR001841 IPR013083 PF13920 PS50089 PTHR12313 PTHR12313:SF0 SM00184 SSF57850 cd16745 mobidb-lite	11
LotjaGi3g1v0126700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 Ubiquitin ligase family protein; TAIR: AT2G44410.1 RING/U-box superfamily protein; Swiss-Prot: sp\|Q6R567\|RMA1_CAPAN E3 ubiquitin-protein ligase RMA1H1; TrEMBL-Plants: tr\|I1LVG7\|I1LVG7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0126700	Domains G3DSA:3.30.40.10 IPR001841 IPR013083 PF13920 PS50089 PTHR12313 PTHR12313:SF0 SM00184 SSF57850 cd16745 mobidb-lite	11
LotjaGi3g1v0443900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase; TAIR: AT4G03510.1 RING membrane-anchor 1; Swiss-Prot: sp\|Q6R567\|RMA1_CAPAN E3 ubiquitin-protein ligase RMA1H1; TrEMBL-Plants: tr\|V7BV69\|V7BV69_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0443900	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 IPR017907 IPR018957 NON_CYTOPLASMIC_DOMAIN PF00097 PS00518 PS50089 PTHR12313 PTHR12313:SF59 SM00184 SSF57850 TRANSMEMBRANE cd16745	16
LotjaGi3g1v0444000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase; TAIR: AT4G03510.1 RING membrane-anchor 1; Swiss-Prot: sp\|Q6R567\|RMA1_CAPAN E3 ubiquitin-protein ligase RMA1H1; TrEMBL-Plants: tr\|A0A0L9UMA5\|A0A0L9UMA5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0444000_LC	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:3.30.40.10 IPR001841 IPR013083 IPR017907 NON_CYTOPLASMIC_DOMAIN PF13920 PS00518 PS50089 PTHR12313 PTHR12313:SF59 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd16745	17
LotjaGi3g1v0444000_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase; TAIR: AT4G03510.1 RING membrane-anchor 1; Swiss-Prot: sp\|Q6R567\|RMA1_CAPAN E3 ubiquitin-protein ligase RMA1H1; TrEMBL-Plants: tr\|A0A0L9UMA5\|A0A0L9UMA5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0444000_LC	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:3.30.40.10 IPR001841 IPR013083 IPR017907 NON_CYTOPLASMIC_DOMAIN PF13920 PS00518 PS50089 PTHR12313 PTHR12313:SF59 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd16745	17
LotjaGi3g1v0454700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase; TAIR: AT4G03510.1 RING membrane-anchor 1; Swiss-Prot: sp\|Q6R567\|RMA1_CAPAN E3 ubiquitin-protein ligase RMA1H1; TrEMBL-Plants: tr\|A0A072U1G6\|A0A072U1G6_MEDTR E3 ubiquitin-protein ligase RMA1H1-like protein; Found in the gene: LotjaGi3g1v0454700	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 IPR017907 IPR018957 NON_CYTOPLASMIC_DOMAIN PF00097 PS00518 PS50089 PTHR12313 PTHR12313:SF59 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd16745	17
LotjaGi4g1v0055700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase; TAIR: AT4G03510.1 RING membrane-anchor 1; Swiss-Prot: sp\|Q6R567\|RMA1_CAPAN E3 ubiquitin-protein ligase RMA1H1; TrEMBL-Plants: tr\|A0A0S3QZJ1\|A0A0S3QZJ1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0055700	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 IPR017907 IPR018957 NON_CYTOPLASMIC_DOMAIN PF00097 PS00518 PS50089 PTHR12313 PTHR12313:SF6 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd16745	17
LotjaGi5g1v0019300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase; TAIR: AT1G19310.1 RING/U-box superfamily protein; Swiss-Prot: sp\|Q6R567\|RMA1_CAPAN E3 ubiquitin-protein ligase RMA1H1; TrEMBL-Plants: tr\|I3S3J9\|I3S3J9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0019300	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 IPR017907 NON_CYTOPLASMIC_DOMAIN PF13920 PS00518 PS50089 PTHR12313 PTHR12313:SF39 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd16745 mobidb-lite	17
LotjaGi5g1v0019300.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase; TAIR: AT1G19310.1 RING/U-box superfamily protein; Swiss-Prot: sp\|Q6R567\|RMA1_CAPAN E3 ubiquitin-protein ligase RMA1H1; TrEMBL-Plants: tr\|I3S3J9\|I3S3J9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0019300	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 IPR017907 NON_CYTOPLASMIC_DOMAIN PF13920 PS00518 PS50089 PTHR12313 PTHR12313:SF39 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd16745 mobidb-lite	17
LotjaGi6g1v0332300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase; TAIR: AT4G03510.1 RING membrane-anchor 1; Swiss-Prot: sp\|Q6R567\|RMA1_CAPAN E3 ubiquitin-protein ligase RMA1H1; TrEMBL-Plants: tr\|I3RZR2\|I3RZR2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0332300	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 IPR017907 IPR018957 NON_CYTOPLASMIC_DOMAIN PF00097 PS00518 PS50089 PTHR12313 PTHR12313:SF6 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd16745 mobidb-lite	18

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	3.70