Domain Predictions — View

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PTHR45977

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 20

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0467700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase family; TAIR: AT3G61180.1 RING/U-box superfamily protein; Swiss-Prot: sp\|Q93Z92\|RING4_ARATH E3 ubiquitin-protein ligase At4g11680; TrEMBL-Plants: tr\|I1L6R5\|I1L6R5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0467700	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 NON_CYTOPLASMIC_DOMAIN PF13639 PS50089 PTHR45977 PTHR45977:SF18 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd16474	14
LotjaGi1g1v0656100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING-finger ubiquitin ligase; TAIR: AT1G68070.1 Zinc finger, C3HC4 type (RING finger) family protein; Swiss-Prot: sp\|Q8GUU2\|RIE1_ARATH E3 ubiquitin protein ligase RIE1; TrEMBL-Plants: tr\|K7MY22\|K7MY22_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0656100	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 NON_CYTOPLASMIC_DOMAIN PF13639 PS50089 PTHR45977 PTHR45977:SF19 SM00184 SSF57850 TMhelix TRANSMEMBRANE	13
LotjaGi1g1v0656500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING/U-box superfamily protein, putative; TAIR: AT1G68070.1 Zinc finger, C3HC4 type (RING finger) family protein; Swiss-Prot: sp\|Q93Z92\|RING4_ARATH E3 ubiquitin-protein ligase At4g11680; TrEMBL-Plants: tr\|K7MY22\|K7MY22_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0656500	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 NON_CYTOPLASMIC_DOMAIN PF13639 PS50089 PTHR45977 PTHR45977:SF19 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd16474	14
LotjaGi1g1v0656500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING/U-box superfamily protein, putative; TAIR: AT1G68070.1 Zinc finger, C3HC4 type (RING finger) family protein; Swiss-Prot: sp\|Q93Z92\|RING4_ARATH E3 ubiquitin-protein ligase At4g11680; TrEMBL-Plants: tr\|K7MY22\|K7MY22_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0656500	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 NON_CYTOPLASMIC_DOMAIN PF13639 PS50089 PTHR45977 PTHR45977:SF19 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00184 SSF57850 TMhelix TRANSMEMBRANE cd16474	18
LotjaGi2g1v0072000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase family; TAIR: AT1G68070.1 Zinc finger, C3HC4 type (RING finger) family protein; Swiss-Prot: sp\|Q8GUU2\|RIE1_ARATH E3 ubiquitin protein ligase RIE1; TrEMBL-Plants: tr\|I1KKV7\|I1KKV7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0072000	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 NON_CYTOPLASMIC_DOMAIN PF13639 PS50089 PTHR45977 PTHR45977:SF22 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd16454 mobidb-lite	15
LotjaGi2g1v0072000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase family; TAIR: AT1G68070.1 Zinc finger, C3HC4 type (RING finger) family protein; Swiss-Prot: sp\|Q8GUU2\|RIE1_ARATH E3 ubiquitin protein ligase RIE1; TrEMBL-Plants: tr\|I1KKV7\|I1KKV7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0072000	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 NON_CYTOPLASMIC_DOMAIN PF13639 PS50089 PTHR45977 PTHR45977:SF22 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00184 SSF57850 SignalP-TM TMhelix TRANSMEMBRANE mobidb-lite	19
LotjaGi2g1v0072000.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase family; TAIR: AT1G68070.1 Zinc finger, C3HC4 type (RING finger) family protein; Swiss-Prot: sp\|Q8GUU2\|RIE1_ARATH E3 ubiquitin protein ligase RIE1; TrEMBL-Plants: tr\|I1KKV7\|I1KKV7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0072000	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 NON_CYTOPLASMIC_DOMAIN PF13639 PS50089 PTHR45977 PTHR45977:SF22 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00184 SSF57850 SignalP-TM TMhelix TRANSMEMBRANE cd16454 mobidb-lite	20
LotjaGi2g1v0378900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING/U-box superfamily protein; TAIR: AT3G51325.1 RING/U-box superfamily protein; Swiss-Prot: sp\|Q8BI21\|RNF38_MOUSE E3 ubiquitin-protein ligase RNF38; TrEMBL-Plants: tr\|I3T8R6\|I3T8R6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0378900	Domains G3DSA:3.30.40.10 IPR001841 IPR013083 NON_CYTOPLASMIC_DOMAIN PF13639 PS50089 PTHR45977 PTHR45977:SF13 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00184 SSF57850 SignalP-noTM	15
LotjaGi2g1v0432200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase family; TAIR: AT1G12760.1 Zinc finger, C3HC4 type (RING finger) family protein; Swiss-Prot: sp\|Q9LN71\|RING1_ARATH E3 ubiquitin-protein ligase At1g12760; TrEMBL-Plants: tr\|A0A151TJP1\|A0A151TJP1_CAJCA E3 ubiquitin-protein ligase family; Found in the gene: LotjaGi2g1v0432200	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 NON_CYTOPLASMIC_DOMAIN PF13639 PS50089 PTHR45977 PTHR45977:SF12 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd16474	14
LotjaGi3g1v0285300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING/U-box superfamily protein; TAIR: AT3G55530.1 RING/U-box superfamily protein; Swiss-Prot: sp\|Q9M2S6\|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1; TrEMBL-Plants: tr\|I3S647\|I3S647_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0285300	Domains G3DSA:3.30.40.10 IPR001841 IPR013083 PF13639 PS50089 PTHR45977 PTHR45977:SF21 SM00184 SSF57850 cd16454	10
LotjaGi3g1v0285300.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING/U-box superfamily protein; TAIR: AT3G55530.1 RING/U-box superfamily protein; Swiss-Prot: sp\|Q9M2S6\|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1; TrEMBL-Plants: tr\|I3S647\|I3S647_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0285300	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 NON_CYTOPLASMIC_DOMAIN PF13639 PS50089 PTHR45977 PTHR45977:SF21 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd16454	14
LotjaGi3g1v0285300.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase SDIR1; TAIR: AT3G55530.1 RING/U-box superfamily protein; Swiss-Prot: sp\|Q9M2S6\|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1; TrEMBL-Plants: tr\|I3S647\|I3S647_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0285300	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR45977 PTHR45977:SF21 TMhelix TRANSMEMBRANE	7
LotjaGi4g1v0221400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase family; TAIR: AT4G11680.1 Zinc finger, C3HC4 type (RING finger) family protein; Swiss-Prot: sp\|Q93Z92\|RING4_ARATH E3 ubiquitin-protein ligase At4g11680; TrEMBL-Plants: tr\|A0A072UPE3\|A0A072UPE3_MEDTR Zinc finger, C3HC4 type (RING finger) protein; Found in the gene: LotjaGi4g1v0221400	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 NON_CYTOPLASMIC_DOMAIN PF13639 PS50089 PTHR45977 PTHR45977:SF12 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd16474 mobidb-lite	15
LotjaGi4g1v0221400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase family; TAIR: AT1G12760.1 Zinc finger, C3HC4 type (RING finger) family protein; Swiss-Prot: sp\|Q9LN71\|RING1_ARATH E3 ubiquitin-protein ligase At1g12760; TrEMBL-Plants: tr\|A0A072UPE3\|A0A072UPE3_MEDTR Zinc finger, C3HC4 type (RING finger) protein; Found in the gene: LotjaGi4g1v0221400	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 NON_CYTOPLASMIC_DOMAIN PF13639 PS50089 PTHR45977 PTHR45977:SF12 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd16474	14
LotjaGi4g1v0457200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase family; TAIR: AT1G68070.1 Zinc finger, C3HC4 type (RING finger) family protein; Swiss-Prot: sp\|Q8GUU2\|RIE1_ARATH E3 ubiquitin protein ligase RIE1; TrEMBL-Plants: tr\|V7CQN0\|V7CQN0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0457200	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 NON_CYTOPLASMIC_DOMAIN PF13639 PS50089 PTHR45977 PTHR45977:SF22 SM00184 SSF57850 TMhelix TRANSMEMBRANE mobidb-lite	14
LotjaGi6g1v0062800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING/U-box superfamily protein; TAIR: AT3G55530.1 RING/U-box superfamily protein; Swiss-Prot: sp\|Q9M2S6\|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1; TrEMBL-Plants: tr\|A0A0S3RZS1\|A0A0S3RZS1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0062800	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 NON_CYTOPLASMIC_DOMAIN PF13639 PS50089 PTHR45977 PTHR45977:SF21 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd16454 mobidb-lite	15
LotjaGi6g1v0062800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING/U-box superfamily protein; TAIR: AT3G55530.1 RING/U-box superfamily protein; Swiss-Prot: sp\|Q9M2S6\|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1; TrEMBL-Plants: tr\|A0A0S3RZS1\|A0A0S3RZS1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0062800	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 NON_CYTOPLASMIC_DOMAIN PF13639 PS50089 PTHR45977 PTHR45977:SF21 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd16454 mobidb-lite	15
LotjaGi6g1v0062800.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING/U-box superfamily protein; TAIR: AT3G55530.1 RING/U-box superfamily protein; Swiss-Prot: sp\|Q9M2S6\|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1; TrEMBL-Plants: tr\|A0A072UZ54\|A0A072UZ54_MEDTR RING zinc finger protein, putative; Found in the gene: LotjaGi6g1v0062800	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 NON_CYTOPLASMIC_DOMAIN PF13639 PS50089 PTHR45977 PTHR45977:SF21 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd16454 mobidb-lite	15
LotjaGi6g1v0062800.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase SDIR1; TAIR: AT3G55530.1 RING/U-box superfamily protein; Swiss-Prot: sp\|Q9M2S6\|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1; TrEMBL-Plants: tr\|C6TGC2\|C6TGC2_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi6g1v0062800	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR45977 PTHR45977:SF21 TMhelix TRANSMEMBRANE	7
LotjaGi6g1v0062800.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING/U-box superfamily protein; TAIR: AT3G55530.1 RING/U-box superfamily protein; Swiss-Prot: sp\|Q9M2S6\|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1; TrEMBL-Plants: tr\|A0A0S3RZS1\|A0A0S3RZS1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0062800	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 NON_CYTOPLASMIC_DOMAIN PF13639 PS50089 PTHR45977 PTHR45977:SF21 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd16454 mobidb-lite	15

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	5.00