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cd18979

Source: CDD

Description

CD_POL_like

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 28

Transcript Name Description Predicted domains Domain count
LotjaGi1g1v0014500.1
– Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT3G50990.1 Peroxidase superfamily protein; Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151SMT1|A0A151SMT1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0014500
Domains
5
LotjaGi1g1v0048500_LC.1
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9W0|B5U9W0_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0048500_LC
Domains
39
LotjaGi1g1v0048500_LC.2
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9W0|B5U9W0_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0048500_LC
Domains
39
LotjaGi1g1v0100200_LC.1
– Gypsy/Ty3 element polyprotein, putative; TAIR: AT1G42190.1 GAG/POL/ENV polyprotein; Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9W1|B5U9W1_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0100200_LC
Domains
26
LotjaGi1g1v0311100_LC.1
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A2Q2C7|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi1g1v0311100_LC
Domains
42
LotjaGi1g1v0361200_LC.1
– Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT3G29750.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A0L9V4B0|A0A0L9V4B0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0361200_LC
Domains
12
LotjaGi1g1v0494800_LC.1
– Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT2G13370.1 chromatin remodeling 5; Swiss-Prot: sp|Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr|A0A151RSW7|A0A151RSW7_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0494800_LC
Domains
12
LotjaGi1g1v0572900.1
– Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT1G42190.1 GAG/POL/ENV polyprotein; Swiss-Prot: sp|Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr|A0A1B5Z7G4|A0A1B5Z7G4_TRISU Uncharacterized protein; Found in the gene: LotjaGi1g1v0572900
Domains
5
LotjaGi1g1v0622800_LC.1
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A2Q2C7|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi1g1v0622800_LC
Domains
37
LotjaGi1g1v0646600_LC.1
– Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT5G54770.1 thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4); TrEMBL-Plants: tr|A0A151RUW5|A0A151RUW5_CAJCA Retrovirus-related Pol polyprotein from transposon 297 family; Found in the gene: LotjaGi1g1v0646600_LC
Domains
2
LotjaGi2g1v0078500_LC.1
– Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT5G07670.1 RNI-like superfamily protein; Swiss-Prot: sp|P0CT41|TF212_SCHPO Transposon Tf2-12 polyprotein; TrEMBL-Plants: tr|A2Q2C7|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi2g1v0078500_LC
Domains
27
LotjaGi2g1v0113200_LC.1
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A0L9V4A1|A0A0L9V4A1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0113200_LC
Domains
37
LotjaGi2g1v0229300.1
– Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT1G30400.1 multidrug resistance-associated protein 1; Swiss-Prot: sp|P32657|CHD1_YEAST Chromo domain-containing protein 1; TrEMBL-Plants: tr|Q84ZV5|Q84ZV5_SOYBN Polyprotein; Found in the gene: LotjaGi2g1v0229300
Domains
6
LotjaGi2g1v0315400_LC.1
– Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT1G42190.1 GAG/POL/ENV polyprotein; Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A0L9VIM9|A0A0L9VIM9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0315400_LC
Domains
16
LotjaGi3g1v0167800_LC.1
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9V8|B5U9V8_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0167800_LC
Domains
39
LotjaGi3g1v0238300_LC.2
– Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT2G13370.1 chromatin remodeling 5; Swiss-Prot: sp|A9X4T1|CHD1_BOMMO Chromodomain-helicase-DNA-binding protein 1; TrEMBL-Plants: tr|A0A1B5Z7G4|A0A1B5Z7G4_TRISU Uncharacterized protein; Found in the gene: LotjaGi3g1v0238300_LC
Domains
5
LotjaGi3g1v0423100_LC.1
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9V8|B5U9V8_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0423100_LC
Domains
37
LotjaGi3g1v0423100_LC.2
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9V8|B5U9V8_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0423100_LC
Domains
37
LotjaGi3g1v0434100_LC.1
– Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT3G06350.1 dehydroquinate dehydratase, putative / shikimate dehydrogenase; Swiss-Prot: sp|Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr|A0A0L9VIM9|A0A0L9VIM9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0434100_LC
Domains
10
LotjaGi4g1v0079800_LC.1
– Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT5G17690.1 like heterochromatin protein (LHP1); Swiss-Prot: sp|Q9WTK2|CDYL_MOUSE Chromodomain Y-like protein; TrEMBL-Plants: tr|A0A1J7FN67|A0A1J7FN67_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0079800_LC
Domains
8
LotjaGi4g1v0125400.1
– Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT2G13370.1 chromatin remodeling 5; Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A0S3RTA1|A0A0S3RTA1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0125400
Domains
5
LotjaGi4g1v0213500_LC.2
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9W0|B5U9W0_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0213500_LC
Domains
40
LotjaGi5g1v0150900_LC.1
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9W1|B5U9W1_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0150900_LC
Domains
41
LotjaGi5g1v0200800_LC.1
– Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT1G17250.1 receptor like protein 3; Swiss-Prot: sp|Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr|A0A151R7E6|A0A151R7E6_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi5g1v0200800_LC
Domains
25
LotjaGi5g1v0343500_LC.1
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P0CT41|TF212_SCHPO Transposon Tf2-12 polyprotein; TrEMBL-Plants: tr|A2Q2C7|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi5g1v0343500_LC
Domains
37
LotjaGi6g1v0025000.1
– Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT1G42190.1 GAG/POL/ENV polyprotein; Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A1B5Z7G4|A0A1B5Z7G4_TRISU Uncharacterized protein; Found in the gene: LotjaGi6g1v0025000
Domains
5
LotjaGi6g1v0033200.1
– Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT1G20650.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A1B5Z7G4|A0A1B5Z7G4_TRISU Uncharacterized protein; Found in the gene: LotjaGi6g1v0033200
Domains
5
LotjaGi6g1v0101400_LC.1
– Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT1G42190.1 GAG/POL/ENV polyprotein; Swiss-Prot: sp|Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr|A0A0L9VIM9|A0A0L9VIM9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0101400_LC
Domains
10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd18979 CDD 1 3.57