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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006016
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We have found 89 results. Now displaying 2 of 2 with 50 rows per page. This search has taken 5.474s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0368500.5
n.a. Kinase, putative; TAIR: AT5G26150.2 protein kinase family protein; Swiss-Prot: sp|Q9SW11|PUB35_ARATH U-box domain-containing protein 35; TrEMBL-Plants: tr|I1JTY6|I1JTY6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0368500 LjG1.1_chr1 84696445 84701620 -
2 domain predictions
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LotjaGi1g1v0396500.1
n.a. Kinase; TAIR: AT2G24370.1 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein; Swiss-Prot: sp|Q9SW11|PUB35_ARATH U-box domain-containing protein 35; TrEMBL-Plants: tr|I1JUN7|I1JUN7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0396500 LjG1.1_chr1 88258322 88264420 +
2 domain predictions
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LotjaGi1g1v0566500.1
n.a. Adenine nucleotide alpha hydrolases-like superfamily protein; TAIR: AT2G21620.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|P87132|YFK5_SCHPO Uncharacterized protein C167.05; TrEMBL-Plants: tr|I3TAI0|I3TAI0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0566500 LjG1.1_chr1 109969753 109972463 +
2 domain predictions
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LotjaGi1g1v0576500.1
n.a. Universal stress protein; TAIR: AT3G53990.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8VYN9|PHO32_ARATH Universal stress protein PHOS32; TrEMBL-Plants: tr|I3SBV4|I3SBV4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0576500 LjG1.1_chr1 111517678 111520799 +
2 domain predictions
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LotjaGi1g1v0765200.1
n.a. Universal stress protein; TAIR: AT2G47710.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|C6SXR1|C6SXR1_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0765200 LjG1.1_chr1 133759273 133763177 -
2 domain predictions
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LotjaGi2g1v0244800.1
n.a. Universal stress protein A-like protein; TAIR: AT5G14680.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3S8G1|I3S8G1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0244800 LjG1.1_chr2 70944640 70947185 -
2 domain predictions
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LotjaGi2g1v0291300.1
n.a. Adenine nucleotide alpha hydrolases-like superfamily protein, putative; TAIR: AT1G69080.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8VYN9|PHO32_ARATH Universal stress protein PHOS32; TrEMBL-Plants: tr|A0A151TRW1|A0A151TRW1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0291300 LjG1.1_chr2 76516307 76531067 -
2 domain predictions
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LotjaGi2g1v0291300.2
n.a. Adenine nucleotide alpha hydrolases-like superfamily protein, putative; TAIR: AT2G03720.2 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q9FKG5|PUB51_ARATH U-box domain-containing protein 51; TrEMBL-Plants: tr|A0A151TRW1|A0A151TRW1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0291300 LjG1.1_chr2 76516307 76531067 -
2 domain predictions
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LotjaGi2g1v0291300.3
n.a. Adenine nucleotide alpha hydrolases-like superfamily protein, putative; TAIR: AT2G03720.2 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q9FKG5|PUB51_ARATH U-box domain-containing protein 51; TrEMBL-Plants: tr|A0A151TRW1|A0A151TRW1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0291300 LjG1.1_chr2 76526680 76531047 -
2 domain predictions
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LotjaGi2g1v0291300.4
n.a. Adenine nucleotide alpha hydrolases-like superfamily protein, putative; TAIR: AT2G03720.2 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q9FKG5|PUB51_ARATH U-box domain-containing protein 51; TrEMBL-Plants: tr|A0A151TRW1|A0A151TRW1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0291300 LjG1.1_chr2 76526680 76531047 -
2 domain predictions
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LotjaGi2g1v0291300.5
n.a. Adenine nucleotide alpha hydrolases-like superfamily protein, putative; TAIR: AT1G69080.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q9FKG5|PUB51_ARATH U-box domain-containing protein 51; TrEMBL-Plants: tr|A0A151TRW1|A0A151TRW1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0291300 LjG1.1_chr2 76529631 76530871 -
2 domain predictions
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LotjaGi3g1v0000200.1
n.a. Kinase family protein; TAIR: AT1G16760.2 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein; Swiss-Prot: sp|Q9SW11|PUB35_ARATH U-box domain-containing protein 35; TrEMBL-Plants: tr|I1MC77|I1MC77_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0000200 LjG1.1_chr3 55171 64449 +
2 domain predictions
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LotjaGi3g1v0221100.1
n.a. Adenine nucleotide alpha hydrolases-like protein; TAIR: AT3G53990.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8VYN9|PHO32_ARATH Universal stress protein PHOS32; TrEMBL-Plants: tr|I3SUH8|I3SUH8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0221100 LjG1.1_chr3 33377457 33381453 +
2 domain predictions
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LotjaGi3g1v0326200.1
n.a. Adenine nucleotide alpha hydrolases-like superfamily protein; TAIR: AT1G11360.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8L4N1|PHO34_ARATH Universal stress protein PHOS34; TrEMBL-Plants: tr|A0A1J7H5X8|A0A1J7H5X8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0326200 LjG1.1_chr3 69365018 69369867 +
2 domain predictions
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LotjaGi3g1v0326200.2
n.a. Adenine nucleotide alpha hydrolases-like superfamily protein; TAIR: AT1G11360.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8L4N1|PHO34_ARATH Universal stress protein PHOS34; TrEMBL-Plants: tr|A0A1J7H5X8|A0A1J7H5X8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0326200 LjG1.1_chr3 69365215 69365997 +
2 domain predictions
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LotjaGi3g1v0438100.1
n.a. Adenine nucleotide alpha hydrolases-like superfamily protein; TAIR: AT1G11360.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8VYN9|PHO32_ARATH Universal stress protein PHOS32; TrEMBL-Plants: tr|I1LUA5|I1LUA5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0438100 LjG1.1_chr3 85123955 85130012 -
2 domain predictions
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LotjaGi4g1v0229300.1
n.a. U-box domain-containing family protein; TAIR: AT5G47740.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q9FKG6|PUB52_ARATH U-box domain-containing protein 52; TrEMBL-Plants: tr|V7CDL8|V7CDL8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0229300 LjG1.1_chr4 53914687 53916669 +
2 domain predictions
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LotjaGi4g1v0256800.1
n.a. Adenine nucleotide alpha hydrolases-like superfamily protein, putative; TAIR: AT3G03290.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3T2C4|I3T2C4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0256800 LjG1.1_chr4 61182198 61185686 +
2 domain predictions
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LotjaGi4g1v0262600.1
n.a. Adenine nucleotide alpha hydrolases-like superfamily protein; TAIR: AT1G48960.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8VYN9|PHO32_ARATH Universal stress protein PHOS32; TrEMBL-Plants: tr|A0A1J7H0B4|A0A1J7H0B4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0262600 LjG1.1_chr4 62561438 62564212 +
2 domain predictions
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LotjaGi4g1v0296300.1
n.a. Receptor-like kinase; TAIR: AT5G57670.2 Protein kinase superfamily protein; Swiss-Prot: sp|Q5XF57|Y5576_ARATH Probable receptor-like serine/threonine-protein kinase At5g57670; TrEMBL-Plants: tr|A0A151SRJ4|A0A151SRJ4_CAJCA Putative LRR receptor-like serine/threonine-protein kinase family; Found in the gene: LotjaGi4g1v0296300 LjG1.1_chr4 66969564 66975141 +
2 domain predictions
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LotjaGi4g1v0296300.2
n.a. Receptor-like kinase; TAIR: AT5G57670.2 Protein kinase superfamily protein; Swiss-Prot: sp|Q5XF57|Y5576_ARATH Probable receptor-like serine/threonine-protein kinase At5g57670; TrEMBL-Plants: tr|A0A151SRJ4|A0A151SRJ4_CAJCA Putative LRR receptor-like serine/threonine-protein kinase family; Found in the gene: LotjaGi4g1v0296300 LjG1.1_chr4 66969686 66975066 +
2 domain predictions
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LotjaGi4g1v0296300.3
n.a. Receptor-like kinase; TAIR: AT5G57670.2 Protein kinase superfamily protein; Swiss-Prot: sp|Q5XF57|Y5576_ARATH Probable receptor-like serine/threonine-protein kinase At5g57670; TrEMBL-Plants: tr|A0A151SRJ4|A0A151SRJ4_CAJCA Putative LRR receptor-like serine/threonine-protein kinase family; Found in the gene: LotjaGi4g1v0296300 LjG1.1_chr4 66969913 66972797 +
2 domain predictions
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LotjaGi4g1v0384500.1
n.a. Adenine nucleotide alpha hydrolases-like superfamily protein, putative; TAIR: AT4G13450.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8KA63|MURB_BUCAP UDP-N-acetylenolpyruvoylglucosamine reductase; TrEMBL-Plants: tr|I1KSL4|I1KSL4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0384500 LjG1.1_chr4 76292115 76294799 +
2 domain predictions
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LotjaGi4g1v0410600.1
n.a. Adenine nucleotide alpha hydrolases-domain containing protein kinase; TAIR: AT5G20310.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q9SW11|PUB35_ARATH U-box domain-containing protein 35; TrEMBL-Plants: tr|I3TAD3|I3TAD3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0410600 LjG1.1_chr4 78656790 78660754 -
2 domain predictions
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LotjaGi4g1v0439500.1
n.a. Kinase; TAIR: AT2G24370.1 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein; Swiss-Prot: sp|Q9FKG6|PUB52_ARATH U-box domain-containing protein 52; TrEMBL-Plants: tr|I1K653|I1K653_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0439500 LjG1.1_chr4 81321677 81327626 +
2 domain predictions
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LotjaGi4g1v0439500.2
n.a. Kinase; TAIR: AT2G24370.1 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein; Swiss-Prot: sp|Q9FKG6|PUB52_ARATH U-box domain-containing protein 52; TrEMBL-Plants: tr|I1K653|I1K653_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0439500 LjG1.1_chr4 81321677 81327626 +
2 domain predictions
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LotjaGi4g1v0439500.3
n.a. Kinase; TAIR: AT2G24370.1 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein; Swiss-Prot: sp|Q9FKG6|PUB52_ARATH U-box domain-containing protein 52; TrEMBL-Plants: tr|I1K653|I1K653_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0439500 LjG1.1_chr4 81321977 81327285 +
2 domain predictions
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LotjaGi5g1v0111800.1
n.a. Universal stress protein A-like protein; TAIR: AT3G11930.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3SSF4|I3SSF4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0111800 LjG1.1_chr5 22154460 22157705 +
2 domain predictions
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LotjaGi5g1v0111800.2
n.a. Universal stress protein A-like protein; TAIR: AT3G11930.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3SSF4|I3SSF4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0111800 LjG1.1_chr5 22154460 22157705 +
2 domain predictions
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LotjaGi5g1v0111800.3
n.a. Universal stress protein family protein; TAIR: AT3G11930.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3SSF4|I3SSF4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0111800 LjG1.1_chr5 22154460 22157705 +
2 domain predictions
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LotjaGi5g1v0111800.4
n.a. Universal stress protein A-like protein; TAIR: AT3G11930.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3SSF4|I3SSF4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0111800 LjG1.1_chr5 22154460 22157705 +
2 domain predictions
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LotjaGi5g1v0111900.1
n.a. Universal stress protein family protein; TAIR: AT3G11930.4 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3SSF4|I3SSF4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0111900 LjG1.1_chr5 22169052 22172296 +
2 domain predictions
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LotjaGi5g1v0121700.1
n.a. Kinase; TAIR: AT2G24370.1 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein; Swiss-Prot: sp|Q9SW11|PUB35_ARATH U-box domain-containing protein 35; TrEMBL-Plants: tr|V7CVM8|V7CVM8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0121700 LjG1.1_chr5 25506004 25520506 +
2 domain predictions
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LotjaGi5g1v0121700.2
n.a. Kinase; TAIR: AT2G24370.1 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein; Swiss-Prot: sp|Q9SW11|PUB35_ARATH U-box domain-containing protein 35; TrEMBL-Plants: tr|V7CVM8|V7CVM8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0121700 LjG1.1_chr5 25506004 25520506 +
2 domain predictions
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LotjaGi5g1v0229000.1
n.a. Universal stress family protein; TAIR: AT3G62550.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3T150|I3T150_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0229000 LjG1.1_chr5 53626978 53637033 +
2 domain predictions
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LotjaGi5g1v0245800.1
n.a. Universal stress family protein; TAIR: AT3G62550.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3T5G2|I3T5G2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0245800 LjG1.1_chr5 55405098 55407816 +
2 domain predictions
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LotjaGi5g1v0251100.1
n.a. Universal stress protein; TAIR: AT2G47710.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3SNA4|I3SNA4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0251100 LjG1.1_chr5 55937974 55946548 -
2 domain predictions
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LotjaGi6g1v0258300.1
n.a. Universal stress protein; TAIR: AT3G17020.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8VYN9|PHO32_ARATH Universal stress protein PHOS32; TrEMBL-Plants: tr|I3SXN2|I3SXN2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0258300 LjG1.1_chr6 57103724 57105670 -
2 domain predictions
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LotjaGi6g1v0281900.1
n.a. U-box domain-containing protein; TAIR: AT5G47740.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8GUH1|PUB33_ARATH U-box domain-containing protein 33; TrEMBL-Plants: tr|I3S183|I3S183_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0281900 LjG1.1_chr6 59816719 59825339 -
2 domain predictions
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