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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0244050 |
| Transcript ID | Lj4g3v0244050.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Chromatin remodeling complex subunit [Theobroma cacao] gi|508704985|gb|EOX96881.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 74 | 74 | – | – | |
| Gene3D | 65 | 130 | 66 | 9.00E-18 | ||
| SUPERFAMILY | 78 | 129 | 52 | 7.31E-16 | ||
| ProSiteProfiles | 81 | 128 | 48 | 10.042 | ||
| SMART | 83 | 126 | 44 | 3.80E-13 | ||
| CDD | 84 | 125 | 42 | 1.04E-21 | – | |
| ProSitePatterns | 84 | 125 | 42 | – | ||
| Pfam | 84 | 127 | 44 | 5.10E-10 | ||
| MobiDBLite | 220 | 267 | 48 | – | – | |
| PANTHER | 295 | 317 | 23 | 0 | – | |
| PANTHER | 295 | 317 | 23 | 0 | – | |
| MobiDBLite | 305 | 344 | 40 | – | – | |
| SMART | 400 | 648 | 249 | 8.60E-09 | ||
| MobiDBLite | 442 | 557 | 116 | – | – | |
| ProSiteProfiles | 578 | 646 | 69 | 10.331 | ||
| SUPERFAMILY | 578 | 649 | 72 | 9.53E-11 | ||
| PANTHER | 609 | 1242 | 634 | 0 | – | |
| Gene3D | 609 | 646 | 38 | 2.10E-08 | – | |
| PANTHER | 609 | 1242 | 634 | 0 | – | |
| CDD | 609 | 646 | 38 | 1.83E-07 | – | |
| SUPERFAMILY | 652 | 698 | 47 | 1.94E-08 | ||
| SMART | 658 | 715 | 58 | 4.20E-06 | ||
| ProSiteProfiles | 660 | 722 | 63 | 9.969 | ||
| Gene3D | 660 | 713 | 54 | 6.30E-06 | – | |
| Pfam | 661 | 711 | 51 | 2.40E-08 | ||
| CDD | 661 | 712 | 52 | 2.99E-06 | – | |
| SUPERFAMILY | 732 | 976 | 245 | 1.43E-57 | ||
| Gene3D | 741 | 939 | 199 | 6.10E-28 | ||
| SMART | 748 | 952 | 205 | 1.50E-37 | ||
| ProSiteProfiles | 764 | 941 | 178 | 22.782 | ||
| Pfam | 770 | 1045 | 276 | 9.70E-59 | ||
| CDD | 771 | 923 | 153 | 1.46E-20 | – | |
| SUPERFAMILY | 978 | 1233 | 256 | 3.60E-62 | ||
| Gene3D | 1058 | 1220 | 163 | 1.00E-25 | ||
| CDD | 1066 | 1190 | 125 | 2.47E-24 | – | |
| ProSiteProfiles | 1071 | 1230 | 160 | 16.743 | ||
| Pfam | 1071 | 1182 | 112 | 2.10E-17 | ||
| SMART | 1097 | 1182 | 86 | 3.70E-22 | ||
| PANTHER | 1335 | 1464 | 130 | 0 | – | |
| MobiDBLite | 1335 | 1357 | 23 | – | – | |
| PANTHER | 1335 | 1464 | 130 | 0 | – | |
| SMART | 1347 | 1411 | 65 | 1.10E-13 | ||
| Pfam | 1370 | 1405 | 36 | 3.40E-06 | ||
| MobiDBLite | 1410 | 1509 | 100 | – | – | |
| PANTHER | 1809 | 1828 | 20 | 0 | – | |
| PANTHER | 1809 | 1828 | 20 | 0 | – | |
| CDD | 1817 | 1861 | 45 | 3.35E-06 | – | |
| MobiDBLite | 1872 | 1892 | 21 | – | – | |
| MobiDBLite | 1964 | 1986 | 23 | – | – | |
| MobiDBLite | 2005 | 2024 | 20 | – | – | |
| MobiDBLite | 2120 | 2209 | 90 | – | – | |
| MobiDBLite | 2275 | 2353 | 79 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of Lj4g3v0244050.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0244050.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.