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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001611
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 861 results. Now displaying 8 of 18 with 50 rows per page. This search has taken 7.721s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj5g3v1960110.1
n.a. Receptor-like kinase [Medicago truncatula] gi|358345602|ref|XP_003636865.1| chr5 27734326 27735238 -
3 domain predictions
1 GO term
Lj5g3v1960120.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357443689|ref|XP_003592122.1| chr5 27735328 27735686 -
2 domain predictions
1 GO term
Lj5g3v1973370.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356515118|ref|XP_003526248.1| chr5 27819342 27823450 -
4 domain predictions
1 GO term
Lj5g3v1973380.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356545124|ref|XP_003540995.1| chr5 27819690 27824618 -
3 domain predictions
1 GO term
Lj5g3v1973380.2
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356545124|ref|XP_003540995.1| chr5 27819690 27824618 -
3 domain predictions
1 GO term
Lj5g3v1973380.3
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356545122|ref|XP_003540994.1| chr5 27819690 27824618 -
3 domain predictions
1 GO term
Lj5g3v1986530.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|358348670|ref|XP_003638367.1| chr5 27871532 27873710 -
5 domain predictions
1 GO term
Lj5g3v1986540.1
n.a. Receptor protein kinase-like protein, partial [Medicago truncatula] gi|357444031|ref|XP_003592293.1| chr5 27874103 27875176 -
2 domain predictions
1 GO term
Lj5g3v1988610.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|358348670|ref|XP_003638367.1| chr5 27890061 27891343 -
3 domain predictions
1 GO term
Lj5g3v1988620.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|358348670|ref|XP_003638367.1| chr5 27891969 27893313 -
4 domain predictions
1 GO term
Lj5g3v1988630.1
n.a. Receptor protein kinase-like protein, partial [Medicago truncatula] gi|357444031|ref|XP_003592293.1| chr5 27893443 27894450 -
2 domain predictions
1 GO term
Lj5g3v2013690.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|358348670|ref|XP_003638367.1| chr5 28330509 28345387 +
3 domain predictions
1 GO term
Lj5g3v2013700.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|358348670|ref|XP_003638367.1| chr5 28332110 28333119 +
3 domain predictions
1 GO term
Lj5g3v2013700.3
n.a. Receptor-like protein kinase [Medicago truncatula] gi|358348670|ref|XP_003638367.1| chr5 28332128 28347260 +
3 domain predictions
1 GO term
Lj5g3v2045230.1
n.a. Leucine-rich repeat protein kinase family protein isoform 1 [Theobroma cacao] gi|508713910|gb|EOY05807.1| chr5 29020088 29026688 -
3 domain predictions
1 GO term
Lj5g3v2058540.1
n.a. PREDICTED: RAN GTPase-activating protein 2-like [Cicer arietinum] gi|502119876|ref|XP_004496765.1| chr5 29705491 29708449 +
2 domain predictions
1 GO term
Lj5g3v2110870.1
n.a. somatic embryogenesis receptor kinase 1-like precursor [Glycine max] gi|359806787|ref|NP_001241049.1| chr5 30176038 30177576 -
2 domain predictions
1 GO term
Lj5g3v2110870.2
n.a. somatic embryogenesis receptor kinase 1-like precursor [Glycine max] gi|359806787|ref|NP_001241049.1| chr5 30176038 30178683 -
2 domain predictions
1 GO term
Lj5g3v2113420.1
n.a. PREDICTED: receptor protein kinase-like protein At4g34220-like, partial [Glycine max] gi|356536160|ref|XP_003536607.1| chr5 30429914 30434170 +
4 domain predictions
1 GO term
Lj5g3v2113590.1
n.a. probably inactive leucine-rich repeat receptor-like protein kinase At3g28040-like precursor [Glycine max] gi|359806182|ref|NP_001241201.1| chr5 30511700 30513682 -
3 domain predictions
1 GO term
Lj5g3v2179880.1
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830-like [Cicer arietinum] gi|502120681|ref|XP_004497046.1| chr5 31356169 31359202 -
2 domain predictions
1 GO term
Lj5g3v2182520.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400-like [Glycine max] gi|356534353|ref|XP_003535720.1| chr5 31606675 31609907 +
2 domain predictions
1 GO term
Lj5g3v2240970.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357439027|ref|XP_003589790.1| chr5 32249647 32253382 -
4 domain predictions
1 GO term
Lj5g3v2240980.1
n.a. Leucine-rich repeat family protein / protein kinase family protein [Medicago truncatula] gi|357438999|ref|XP_003589776.1| chr5 32255079 32256963 -
3 domain predictions
1 GO term
Lj5g3v2240980.2
n.a. Leucine-rich repeat family protein / protein kinase family protein [Medicago truncatula] gi|357438999|ref|XP_003589776.1| chr5 32255079 32256963 -
3 domain predictions
1 GO term
Lj5g3v2241100.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357439017|ref|XP_003589785.1| chr5 32320614 32323086 +
2 domain predictions
1 GO term
Lj5g3v2241160.1
n.a. n.a. chr5 32333963 32352193 -
4 domain predictions
1 GO term
Lj5g3v2241160.2
n.a. n.a. chr5 32334569 32352193 -
4 domain predictions
1 GO term
Lj5g3v2241190.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357439013|ref|XP_003589783.1| chr5 32344650 32347544 +
4 domain predictions
1 GO term
Lj5g3v2241200.1
n.a. Leucine-rich repeat family protein / protein kinase family protein [Medicago truncatula] gi|357438999|ref|XP_003589776.1| chr5 32346198 32349493 +
2 domain predictions
1 GO term
Lj5g3v2258370.1
n.a. F-box/LRR-repeat protein [Medicago truncatula] gi|357444831|ref|XP_003592693.1| chr5 32770846 32774064 -
2 domain predictions
1 GO term
Lj5g3v2262850.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like isoform X1 [Cicer arietinum] gi|502121291|ref|XP_004497258.1| chr5 32966298 32970450 -
2 domain predictions
1 GO term
Lj5g3v2266300.1
n.a. Leucine-rich repeat receptor-like protein kinase [Medicago truncatula] gi|357455263|ref|XP_003597912.1| chr5 33136590 33138141 +
3 domain predictions
1 GO term
Lj6g3v0292020.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Cicer arietinum] gi|502135214|ref|XP_004502257.1| chr6 3039180 3043267 -
2 domain predictions
1 GO term
Lj6g3v0437170.1
n.a. PREDICTED: F-box protein SKIP19-like [Glycine max] gi|356546510|ref|XP_003541669.1| chr6 4176362 4182360 -
2 domain predictions
1 GO term
Lj6g3v0437170.2
n.a. F-box protein SKIP19 [Medicago truncatula] gi|357439753|ref|XP_003590154.1| chr6 4180591 4182360 -
2 domain predictions
1 GO term
Lj6g3v0437390.1
n.a. PREDICTED: F-box protein SKIP19-like [Glycine max] gi|356546510|ref|XP_003541669.1| chr6 4268946 4270751 -
2 domain predictions
1 GO term
Lj6g3v0437430.1
n.a. PREDICTED: F-box protein SKIP19-like [Glycine max] gi|356555512|ref|XP_003546075.1| chr6 4294233 4294658 -
2 domain predictions
1 GO term
Lj6g3v0693440.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g26540-like [Cicer arietinum] gi|502129028|ref|XP_004500157.1| chr6 6755394 6759217 -
3 domain predictions
1 GO term
Lj6g3v0802310.1
n.a. Nucleotide-binding oligomerization domain-containing protein [Medicago truncatula] gi|357459937|ref|XP_003600250.1| chr6 7928575 7933952 +
2 domain predictions
1 GO term
Lj6g3v0937000.1
n.a. PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3-like [Glycine max] gi|356524179|ref|XP_003530709.1| chr6 10505425 10509706 +
2 domain predictions
1 GO term
Lj6g3v0938090.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Cicer arietinum] gi|502078346|ref|XP_004485915.1| chr6 10561436 10565135 -
4 domain predictions
1 GO term
Lj6g3v1007870.1
n.a. NBS-LRR resistance-like protein 1N [Medicago truncatula] gi|357458159|ref|XP_003599360.1| chr6 11015951 11021796 -
2 domain predictions
1 GO term
Lj6g3v1048910.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g30520-like [Cicer arietinum] gi|502150060|ref|XP_004507770.1| chr6 11822492 11827633 -
2 domain predictions
1 GO term
Lj6g3v1078300.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230-like [Glycine max] gi|356514447|ref|XP_003525917.1| chr6 12759371 12762840 -
5 domain predictions
1 GO term
Lj6g3v1088810.1
n.a. n.a. chr6 13090002 13094021 +
3 domain predictions
1 GO term
Lj6g3v1088820.1
n.a. PREDICTED: leucine-rich repeat receptor-like protein kinase TDR-like [Glycine max] gi|356556623|ref|XP_003546623.1| chr6 13090972 13094433 -
2 domain predictions
1 GO term
Lj6g3v1088860.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|358345048|ref|XP_003636596.1| chr6 13129613 13132867 +
2 domain predictions
1 GO term
Lj6g3v1315120.1
n.a. PREDICTED: leucine-rich repeat protein soc-2 homolog [Glycine max] gi|356556262|ref|XP_003546445.1| chr6 15578067 15583064 -
3 domain predictions
1 GO term
Lj6g3v1416970.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1-like [Glycine max] gi|356558217|ref|XP_003547404.1| chr6 16800612 16805651 +
3 domain predictions
1 GO term