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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002110
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We have found 302 results. Now displaying 5 of 7 with 50 rows per page. This search has taken 5.721s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. Ankyrin repeat family protein; TAIR: AT2G28840.1 hypothetical protein; Swiss-Prot: sp|Q94B55|XB31_ARATH Putative E3 ubiquitin-protein ligase XBAT31; TrEMBL-Plants: tr|I1LK31|I1LK31_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0372500 LjG1.1_chr2 86941085 86944880 +
n.a. Ankyrin repeat-containing protein; TAIR: AT2G31820.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q6AWW5|Y5262_ARATH Ankyrin repeat-containing protein At5g02620; TrEMBL-Plants: tr|A0A0S3RIE5|A0A0S3RIE5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0425700 LjG1.1_chr2 92351106 92359187 -
n.a. Ankyrin repeat-containing protein; TAIR: AT2G31820.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q6AWW5|Y5262_ARATH Ankyrin repeat-containing protein At5g02620; TrEMBL-Plants: tr|A0A0S3RIE5|A0A0S3RIE5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0425700 LjG1.1_chr2 92356828 92358542 -
n.a. Ankyrin repeat-containing protein; TAIR: AT1G10340.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q9ZU96|Y2168_ARATH Ankyrin repeat-containing protein At2g01680; TrEMBL-Plants: tr|I1MCT7|I1MCT7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0020200 LjG1.1_chr3 2084408 2087327 +
n.a. Ankyrin repeat-containing protein family; TAIR: AT4G10720.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q8GYH5|BAD1_ARATH Ankyrin repeat-containing protein BDA1; TrEMBL-Plants: tr|A0A0B2Q9N1|A0A0B2Q9N1_GLYSO Ankyrin-2; Found in the gene: LotjaGi3g1v0045800 LjG1.1_chr3 4881531 4886421 +
n.a. Zinc finger CCCH domain-containing protein; TAIR: AT2G41900.1 CCCH-type zinc finger protein with ARM repeat domain-containing protein; Swiss-Prot: sp|P93755|C3H30_ARATH Zinc finger CCCH domain-containing protein 30; TrEMBL-Plants: tr|I1LVD6|I1LVD6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0060800 LjG1.1_chr3 6429998 6435092 -
n.a. Zinc finger CCCH domain-containing protein; TAIR: AT2G41900.1 CCCH-type zinc finger protein with ARM repeat domain-containing protein; Swiss-Prot: sp|P93755|C3H30_ARATH Zinc finger CCCH domain-containing protein 30; TrEMBL-Plants: tr|I1LVD6|I1LVD6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0060800 LjG1.1_chr3 6431799 6433919 -
n.a. Ankyrin repeat-containing protein family; TAIR: AT3G18670.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q9C7A2|ITN1_ARATH Ankyrin repeat-containing protein ITN1; TrEMBL-Plants: tr|A0A151QZ69|A0A151QZ69_CAJCA Ankyrin repeat-containing protein family; Found in the gene: LotjaGi3g1v0105400 LjG1.1_chr3 13074827 13079665 +
n.a. Ankyrin repeat-containing protein family; TAIR: AT3G18670.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q9C7A2|ITN1_ARATH Ankyrin repeat-containing protein ITN1; TrEMBL-Plants: tr|A0A151QZ69|A0A151QZ69_CAJCA Ankyrin repeat-containing protein family; Found in the gene: LotjaGi3g1v0105400 LjG1.1_chr3 13074827 13079665 +
n.a. Protein kinase, putative; TAIR: AT5G13530.1 protein kinases;ubiquitin-protein ligase; Swiss-Prot: sp|Q9FY48|KEG_ARATH E3 ubiquitin-protein ligase KEG; TrEMBL-Plants: tr|I1LLG6|I1LLG6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0108600 LjG1.1_chr3 13381294 13406224 +
n.a. Protein kinase, putative; TAIR: AT5G13530.1 protein kinases;ubiquitin-protein ligase; Swiss-Prot: sp|Q9FY48|KEG_ARATH E3 ubiquitin-protein ligase KEG; TrEMBL-Plants: tr|A0A1J7IRE0|A0A1J7IRE0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0108600 LjG1.1_chr3 13381809 13385193 +
n.a. Protein kinase, putative; TAIR: AT5G13530.1 protein kinases;ubiquitin-protein ligase; Swiss-Prot: sp|Q9FY48|KEG_ARATH E3 ubiquitin-protein ligase KEG; TrEMBL-Plants: tr|I1LLG6|I1LLG6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0108600 LjG1.1_chr3 13381809 13405194 +
n.a. Protein kinase, putative; TAIR: AT5G13530.1 protein kinases;ubiquitin-protein ligase; Swiss-Prot: sp|Q9FY48|KEG_ARATH E3 ubiquitin-protein ligase KEG; TrEMBL-Plants: tr|I1LLG6|I1LLG6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0108600 LjG1.1_chr3 13381809 13405194 +
n.a. Ankyrin repeat domain protein, putative; TAIR: AT5G13530.1 protein kinases;ubiquitin-protein ligase; Swiss-Prot: sp|Q9FY48|KEG_ARATH E3 ubiquitin-protein ligase KEG; TrEMBL-Plants: tr|I1LLG6|I1LLG6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0108600 LjG1.1_chr3 13397147 13399823 +
n.a. E3 ubiquitin-protein ligase KEG; TAIR: AT5G13530.1 protein kinases;ubiquitin-protein ligase; Swiss-Prot: sp|Q9FY48|KEG_ARATH E3 ubiquitin-protein ligase KEG; TrEMBL-Plants: tr|A0A0B2QMC9|A0A0B2QMC9_GLYSO E3 ubiquitin-protein ligase KEG; Found in the gene: LotjaGi3g1v0108600 LjG1.1_chr3 13397147 13405194 +
n.a. Zinc finger CCCH domain-containing protein; TAIR: AT2G41900.1 CCCH-type zinc finger protein with ARM repeat domain-containing protein; Swiss-Prot: sp|P93755|C3H30_ARATH Zinc finger CCCH domain-containing protein 30; TrEMBL-Plants: tr|I1MJP7|I1MJP7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0122600 LjG1.1_chr3 14998075 15002595 +
n.a. Ankyrin repeat family protein; TAIR: AT2G28840.1 hypothetical protein; Swiss-Prot: sp|Q94B55|XB31_ARATH Putative E3 ubiquitin-protein ligase XBAT31; TrEMBL-Plants: tr|A0A072UHZ3|A0A072UHZ3_MEDTR E3 ubiquitin-protein ligase XBAT31-like protein; Found in the gene: LotjaGi3g1v0231200 LjG1.1_chr3 36285289 36294081 -
n.a. Ankyrin repeat-containing protein; TAIR: AT1G07710.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q6AWW5|Y5262_ARATH Ankyrin repeat-containing protein At5g02620; TrEMBL-Plants: tr|A0A1J7IB00|A0A1J7IB00_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0278500 LjG1.1_chr3 55232639 55238946 -
n.a. Ankyrin repeat-containing protein; TAIR: AT1G07710.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q6AWW5|Y5262_ARATH Ankyrin repeat-containing protein At5g02620; TrEMBL-Plants: tr|A0A1J7IB00|A0A1J7IB00_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0278500 LjG1.1_chr3 55234641 55237913 -
n.a. Ankyrin repeat-containing protein; TAIR: AT1G07710.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q6AWW5|Y5262_ARATH Ankyrin repeat-containing protein At5g02620; TrEMBL-Plants: tr|A0A1J7IB00|A0A1J7IB00_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0278500 LjG1.1_chr3 55234641 55237913 -
n.a. Ankyrin repeat family protein; TAIR: AT2G28840.1 hypothetical protein; Swiss-Prot: sp|Q94B55|XB31_ARATH Putative E3 ubiquitin-protein ligase XBAT31; TrEMBL-Plants: tr|A0A0L9UNF0|A0A0L9UNF0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0282800 LjG1.1_chr3 56814312 56818294 +
n.a. Ankyrin repeat domain protein, putative; TAIR: AT2G17390.1 ankyrin repeat-containing 2B; Swiss-Prot: sp|Q29Q26|AKR2B_ARATH Ankyrin repeat domain-containing protein 2B; TrEMBL-Plants: tr|V7BRV0|V7BRV0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0330200 LjG1.1_chr3 69779525 69786240 +
n.a. Ankyrin repeat domain protein, putative; TAIR: AT4G35450.1 ankyrin repeat-containing protein 2; Swiss-Prot: sp|Q9SAR5|AKR2A_ARATH Ankyrin repeat domain-containing protein 2A; TrEMBL-Plants: tr|V7BRV0|V7BRV0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0330200 LjG1.1_chr3 69781171 69785353 +
n.a. ADP-ribosylation factor GTPase-activating protein; TAIR: AT1G60860.1 ARF-GAP domain 2; Swiss-Prot: sp|Q9C6C3|AGD2_ARATH ADP-ribosylation factor GTPase-activating protein AGD2; TrEMBL-Plants: tr|K7LSS6|K7LSS6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0524900 LjG1.1_chr3 94168287 94180100 -
n.a. Ankyrin repeat family protein; TAIR: AT1G11740.1 ankyrin repeat family protein; Swiss-Prot: sp|Q86YJ7|AN13B_HUMAN Ankyrin repeat domain-containing protein 13B; TrEMBL-Plants: tr|A0A0L9TTD5|A0A0L9TTD5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0014000 LjG1.1_chr4 1793625 1796936 +
n.a. Calmodulin-binding transcription activator; TAIR: AT5G64220.1 Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain; Swiss-Prot: sp|Q6NPP4|CMTA2_ARATH Calmodulin-binding transcription activator 2; TrEMBL-Plants: tr|K7KPP6|K7KPP6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0035100 LjG1.1_chr4 4258166 4268430 +
n.a. Calmodulin-binding transcription activator; TAIR: AT5G64220.1 Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain; Swiss-Prot: sp|Q6NPP4|CMTA2_ARATH Calmodulin-binding transcription activator 2; TrEMBL-Plants: tr|K7KPP6|K7KPP6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0035100 LjG1.1_chr4 4258166 4268508 +
n.a. Calmodulin-binding transcription activator; TAIR: AT5G64220.1 Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain; Swiss-Prot: sp|Q6NPP4|CMTA2_ARATH Calmodulin-binding transcription activator 2; TrEMBL-Plants: tr|K7KPP6|K7KPP6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0035100 LjG1.1_chr4 4258242 4268288 +
n.a. S-acyltransferase; TAIR: AT2G14255.1 Ankyrin repeat family protein with DHHC zinc finger domain-containing protein; Swiss-Prot: sp|Q3EC11|ZDHC2_ARATH Probable protein S-acyltransferase 23; TrEMBL-Plants: tr|A0A151SIB0|A0A151SIB0_CAJCA S-acyltransferase; Found in the gene: LotjaGi4g1v0042800 LjG1.1_chr4 5055318 5065245 +
n.a. Protein kinase, putative; TAIR: AT1G14000.1 VH1-interacting kinase; Swiss-Prot: sp|F4JTP5|STY46_ARATH Serine/threonine-protein kinase STY46; TrEMBL-Plants: tr|A0A072UY58|A0A072UY58_MEDTR Dual specificity kinase splA-like protein; Found in the gene: LotjaGi4g1v0089500 LjG1.1_chr4 11860336 11868958 +
n.a. Protein kinase, putative; TAIR: AT1G14000.1 VH1-interacting kinase; Swiss-Prot: sp|F4JTP5|STY46_ARATH Serine/threonine-protein kinase STY46; TrEMBL-Plants: tr|A0A072UY58|A0A072UY58_MEDTR Dual specificity kinase splA-like protein; Found in the gene: LotjaGi4g1v0089500 LjG1.1_chr4 11860438 11865473 +
n.a. Kinase family protein; TAIR: AT1G14000.1 VH1-interacting kinase; Swiss-Prot: sp|Q8RWL6|STY17_ARATH Serine/threonine-protein kinase STY17; TrEMBL-Plants: tr|K7K1X9|K7K1X9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0089500 LjG1.1_chr4 11860438 11867426 +
n.a. Potassium channel; TAIR: AT2G26650.2 K+ transporter 1; Swiss-Prot: sp|Q38998|AKT1_ARATH Potassium channel AKT1; TrEMBL-Plants: tr|A0A1J7I327|A0A1J7I327_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0266600 LjG1.1_chr4 63143089 63150048 -
n.a. Potassium channel; TAIR: AT2G26650.1 K+ transporter 1; Swiss-Prot: sp|Q38998|AKT1_ARATH Potassium channel AKT1; TrEMBL-Plants: tr|G7JV81|G7JV81_MEDTR Inwardly rectifying potassium channel subunit; Found in the gene: LotjaGi4g1v0266600 LjG1.1_chr4 63143089 63150585 -
n.a. S-acyltransferase; TAIR: AT5G20350.1 Ankyrin repeat family protein with DHHC zinc finger domain-containing protein; Swiss-Prot: sp|Q52T38|ZDH22_ARATH Protein S-acyltransferase 24; TrEMBL-Plants: tr|A0A151SRG0|A0A151SRG0_CAJCA S-acyltransferase; Found in the gene: LotjaGi4g1v0280300 LjG1.1_chr4 65126908 65134361 +
n.a. S-acyltransferase; TAIR: AT5G20350.1 Ankyrin repeat family protein with DHHC zinc finger domain-containing protein; Swiss-Prot: sp|Q52T38|ZDH22_ARATH Protein S-acyltransferase 24; TrEMBL-Plants: tr|A0A151SRG0|A0A151SRG0_CAJCA S-acyltransferase; Found in the gene: LotjaGi4g1v0280300 LjG1.1_chr4 65127881 65133911 +
n.a. Ankyrin repeat-containing protein, putative; TAIR: AT5G57740.1 hypothetical protein; Swiss-Prot: sp|Q6NLQ8|XB32_ARATH E3 ubiquitin-protein ligase XBAT32; TrEMBL-Plants: tr|G7JEC0|G7JEC0_MEDTR E3 ubiquitin-protein ligase XBOS32; Found in the gene: LotjaGi4g1v0294800 LjG1.1_chr4 66709138 66715155 -
n.a. Ankyrin repeat domain-containing protein; TAIR: AT2G26210.1 Ankyrin repeat family protein; Swiss-Prot: sp|P40343|VPS27_YEAST Vacuolar protein sorting-associated protein 27; TrEMBL-Plants: tr|I3SWL3|I3SWL3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0318000 LjG1.1_chr4 69554627 69559782 +
n.a. Ankyrin repeat-containing protein; TAIR: AT3G01750.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q5F478|ANR44_CHICK Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B; TrEMBL-Plants: tr|A0A0B2RRD2|A0A0B2RRD2_GLYSO Ankyrin repeat-containing protein; Found in the gene: LotjaGi4g1v0328700 LjG1.1_chr4 70759447 70763160 +
n.a. Calmodulin-binding transcription activator; TAIR: AT4G16150.1 calmodulin-binding transcription activator 5; Swiss-Prot: sp|O23463|CMTA5_ARATH Calmodulin-binding transcription activator 5; TrEMBL-Plants: tr|K7L3K8|K7L3K8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0335500 LjG1.1_chr4 71569183 71579315 -
n.a. Ankyrin repeat protein; TAIR: AT3G18670.2 Ankyrin repeat family protein; Swiss-Prot: sp|P19838|NFKB1_HUMAN Nuclear factor NF-kappa-B p105 subunit; TrEMBL-Plants: tr|K7L3S4|K7L3S4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0347200_LC LjG1.1_chr4 72632882 72637087 -
n.a. Calmodulin-binding transcription activator; TAIR: AT1G67310.1 Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain; Swiss-Prot: sp|Q9FYG2|CMTA4_ARATH Calmodulin-binding transcription activator 4; TrEMBL-Plants: tr|K7KQB0|K7KQB0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0367100 LjG1.1_chr4 74684960 74696818 -
n.a. Calmodulin-binding transcription activator; TAIR: AT1G67310.1 Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain; Swiss-Prot: sp|Q9FYG2|CMTA4_ARATH Calmodulin-binding transcription activator 4; TrEMBL-Plants: tr|A0A151SDL9|A0A151SDL9_CAJCA Calmodulin-binding transcription activator 4; Found in the gene: LotjaGi4g1v0367100 LjG1.1_chr4 74688110 74696839 -
n.a. Protein kinase family protein; TAIR: AT2G43850.1 Integrin-linked protein kinase family; Swiss-Prot: sp|Q05609|CTR1_ARATH Serine/threonine-protein kinase CTR1; TrEMBL-Plants: tr|K7KQN9|K7KQN9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0387200 LjG1.1_chr4 76579874 76584742 -
n.a. Protein kinase family protein; TAIR: AT2G43850.1 Integrin-linked protein kinase family; Swiss-Prot: sp|Q05609|CTR1_ARATH Serine/threonine-protein kinase CTR1; TrEMBL-Plants: tr|K7KQN9|K7KQN9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0387200 LjG1.1_chr4 76580467 76584642 -
n.a. Calmodulin-binding transcription activator; TAIR: AT2G22300.1 signal responsive 1; Swiss-Prot: sp|Q8GSA7|CMTA3_ARATH Calmodulin-binding transcription activator 3; TrEMBL-Plants: tr|I1K4J1|I1K4J1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0396800 LjG1.1_chr4 77457181 77469528 -
n.a. ADP-ribosylation factor GTPase-activating protein; TAIR: AT5G61980.1 ARF-GAP domain 1; Swiss-Prot: sp|Q9FIT8|AGD1_ARATH ADP-ribosylation factor GTPase-activating protein AGD1; TrEMBL-Plants: tr|I1K6T3|I1K6T3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0421700 LjG1.1_chr4 79690415 79698687 -
n.a. ADP-ribosylation factor GTPase-activating protein; TAIR: AT5G61980.1 ARF-GAP domain 1; Swiss-Prot: sp|Q9FIT8|AGD1_ARATH ADP-ribosylation factor GTPase-activating protein AGD1; TrEMBL-Plants: tr|I1K6T3|I1K6T3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0421700 LjG1.1_chr4 79690415 79699454 -
n.a. ADP-ribosylation factor GTPase-activating protein; TAIR: AT5G61980.1 ARF-GAP domain 1; Swiss-Prot: sp|Q9FIT8|AGD1_ARATH ADP-ribosylation factor GTPase-activating protein AGD1; TrEMBL-Plants: tr|G7LIT7|G7LIT7_MEDTR ADP-ribosylation factor GTPase-activating protein AGD10; Found in the gene: LotjaGi4g1v0421700 LjG1.1_chr4 79690415 79699454 -
n.a. Ankyrin repeat-containing protein family; TAIR: AT2G01680.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q9ZU96|Y2168_ARATH Ankyrin repeat-containing protein At2g01680; TrEMBL-Plants: tr|A0A151T394|A0A151T394_CAJCA Ankyrin repeat-containing protein family; Found in the gene: LotjaGi4g1v0456900 LjG1.1_chr4 82820015 82824218 +