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The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.
We have found 245 results. Now displaying 2 of 5 with 50 rows per page. This search has taken 5.786s to perform.
Transcript | Name | Description | Chr | Start | End | Strand | Domain predictions | GO predictions |
---|---|---|---|---|---|---|---|---|
n.a. | PREDICTED: E3 ubiquitin-protein ligase makorin-like [Glycine max] gi|356557148|ref|XP_003546880.1| | chr3 | 10669869 | 10673399 | - | – | ||
n.a. | PREDICTED: E3 ubiquitin-protein ligase Hakai-like [Cicer arietinum] gi|502168892|ref|XP_004514488.1| | chr3 | 17942941 | 17946805 | + | – | ||
n.a. | PREDICTED: E3 ubiquitin-protein ligase RNF170-like [Fragaria vesca subsp]. vesca] gi|470127714|ref|XP_004299808.1| | chr3 | 25288831 | 25291340 | + | – | ||
n.a. | IBR domain containing protein [Medicago truncatula] gi|357472415|ref|XP_003606492.1| | chr3 | 28089241 | 28099773 | - | – | ||
n.a. | PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-like [Glycine max] gi|356522438|ref|XP_003529853.1| | chr3 | 31368457 | 31369566 | + | – | ||
n.a. | PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max] gi|356549928|ref|XP_003543342.1| | chr3 | 34400295 | 34403002 | - | – | ||
n.a. | PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max] gi|356549928|ref|XP_003543342.1| | chr3 | 34406958 | 34409140 | - | – | ||
n.a. | Ring 1b [Theobroma cacao] gi|508707572|gb|EOX99468.1| | chr3 | 34611824 | 34619962 | + | – | ||
n.a. | PREDICTED: ATP-dependent helicase rhp16-like isoform X1 [Cicer arietinum] gi|502145992|ref|XP_004506272.1| | chr3 | 36326603 | 36335573 | + | – | ||
n.a. | PREDICTED: ATP-dependent helicase rhp16-like isoform X1 [Cicer arietinum] gi|502145992|ref|XP_004506272.1| | chr3 | 36326603 | 36335573 | + | – | ||
n.a. | PREDICTED: ATP-dependent helicase rhp16-like [Glycine max] gi|356547089|ref|XP_003541950.1| | chr3 | 36505266 | 36508191 | - | – | ||
n.a. | PREDICTED: ATP-dependent helicase rhp16-like [Glycine max] gi|356547089|ref|XP_003541950.1| | chr3 | 36505266 | 36507787 | - | – | ||
n.a. | PREDICTED: ATP-dependent helicase rhp16-like [Glycine max] gi|356547089|ref|XP_003541950.1| | chr3 | 36505266 | 36507392 | - | – | ||
n.a. | PREDICTED: ATP-dependent helicase rhp16-like [Glycine max] gi|356547089|ref|XP_003541950.1| | chr3 | 36505402 | 36507392 | - | – | ||
n.a. | PREDICTED: LON peptidase N-terminal domain and RING finger protein 3-like isoform X1 [Cicer arietinum] gi|502144764|ref|XP_004505742.1| | chr3 | 42660770 | 42663477 | + | – | ||
n.a. | PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cicer arietinum] gi|502146141|ref|XP_004506322.1| | chr3 | 44877034 | 44888178 | - | – | ||
n.a. | PREDICTED: zinc finger CCCH domain-containing protein 1-like [Glycine max] gi|356506028|ref|XP_003521790.1| | chr4 | 2709936 | 2713676 | + | – | ||
n.a. | PREDICTED: DNA repair protein RAD5-like [Cicer arietinum] gi|502077783|ref|XP_004485743.1| | chr4 | 6171951 | 6191456 | + | – | ||
n.a. | PREDICTED: probable E3 ubiquitin-protein ligase makorin-1-like [Glycine max] gi|356521345|ref|XP_003529317.1| | chr4 | 6559395 | 6562907 | + | – | ||
n.a. | PREDICTED: probable E3 ubiquitin-protein ligase makorin-1-like [Glycine max] gi|356521345|ref|XP_003529317.1| | chr4 | 6559395 | 6562907 | + | – | ||
n.a. | PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max] gi|356521355|ref|XP_003529322.1| | chr4 | 6629297 | 6630407 | - | – | ||
n.a. | RING/U-box superfamily protein [Theobroma cacao] gi|508775113|gb|EOY22369.1| | chr4 | 21627985 | 21630624 | + | – | ||
n.a. | PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase XBAT32-like [Cicer arietinum] gi|502150110|ref|XP_004507793.1| | chr4 | 28189677 | 28195088 | - | – | ||
n.a. | RING finger protein [Medicago truncatula] gi|357463141|ref|XP_003601852.1| | chr4 | 33929498 | 33931374 | - | – | ||
n.a. | RING finger protein [Medicago truncatula] gi|357463141|ref|XP_003601852.1| | chr4 | 33929498 | 33932043 | - | – | ||
n.a. | Uncharacterized protein TCM_016489 [Theobroma cacao] gi|508777803|gb|EOY25059.1| | chr4 | 39959328 | 39968616 | + | – | ||
n.a. | PREDICTED: peroxisome biogenesis factor 10-like [Glycine max] gi|356564027|ref|XP_003550258.1| | chr5 | 4364717 | 4372151 | - | – | ||
n.a. | PHD and RING finger domain-containing protein [Medicago truncatula] gi|357511785|ref|XP_003626181.1| | chr5 | 22041010 | 22044719 | + | – | ||
n.a. | PREDICTED: E3 ubiquitin-protein ligase BAH1-like isoform X1 [Cicer arietinum] gi|502117818|ref|XP_004495961.1| | chr5 | 23608537 | 23612012 | + | – | ||
n.a. | PREDICTED: E3 ubiquitin-protein ligase XBAT33-like [Glycine max] gi|356575939|ref|XP_003556093.1| | chr5 | 28491828 | 28496373 | - | – | ||
n.a. | PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-like [Cicer arietinum] gi|502119893|ref|XP_004496771.1| | chr5 | 29756424 | 29757501 | + | – | ||
n.a. | Pre-mRNA splicing factor ATP-dependent RNA helicase-like protein [Medicago truncatula] gi|357463271|ref|XP_003601917.1| | chr5 | 33160225 | 33161396 | + | – | ||
n.a. | n.a. | chr5 | 33160269 | 33163575 | - | – | ||
n.a. | n.a. | chr5 | 33160384 | 33163800 | - | – | ||
n.a. | Pre-mRNA splicing factor ATP-dependent RNA helicase-like protein [Medicago truncatula] gi|357463271|ref|XP_003601917.1| | chr5 | 33162289 | 33163611 | + | – | ||
n.a. | RING/U-box superfamily protein isoform 2 [Theobroma cacao] gi|508785653|gb|EOY32909.1| | chr6 | 10768240 | 10772229 | + | – | ||
n.a. | PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-like [Cicer arietinum] gi|502086230|ref|XP_004488151.1| | chr6 | 14075608 | 14078086 | + | – | ||
n.a. | PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-like [Cicer arietinum] gi|502086230|ref|XP_004488151.1| | chr6 | 14081975 | 14082816 | + | – | ||
n.a. | E3 ubiquitin-protein ligase RNF216 [Medicago truncatula] gi|357448361|ref|XP_003594456.1| | chr6 | 18876012 | 18880795 | + | – | ||
n.a. | PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Glycine max] gi|356557797|ref|XP_003547197.1| | chr6 | 22290952 | 22291667 | - | – | ||
n.a. | PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max] gi|356555252|ref|XP_003545948.1| | chr6 | 24036291 | 24038483 | + | – | ||
n.a. | PREDICTED: probable E3 ubiquitin-protein ligase makorin-1-like [Glycine max] gi|356521345|ref|XP_003529317.1| | chr6 | 24122102 | 24126109 | - | – | ||
n.a. | PREDICTED: DNA repair protein RAD5-like [Cicer arietinum] gi|502077783|ref|XP_004485743.1| | chr6 | 24294073 | 24304878 | - | – | ||
n.a. | PREDICTED: DNA repair protein RAD5-like [Cicer arietinum] gi|502077783|ref|XP_004485743.1| | chr6 | 24294073 | 24304878 | - | – | ||
n.a. | PREDICTED: DNA repair protein RAD5-like [Cicer arietinum] gi|502077783|ref|XP_004485743.1| | chr6 | 24294073 | 24302907 | - | – | ||
n.a. | PREDICTED: nitric oxide synthase-interacting protein-like [Cicer arietinum] gi|502077568|ref|XP_004485689.1| | chr6 | 24697358 | 24699604 | - | – | ||
n.a. | E3 ubiquitin-protein ligase orthrus-like protein; TAIR: AT1G57820.1 Zinc finger (C3HC4-type RING finger) family protein; Swiss-Prot: sp|Q8VYZ0|ORTH2_ARATH E3 ubiquitin-protein ligase ORTHRUS 2; TrEMBL-Plants: tr|I1JJU5|I1JJU5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0004400 | LjG1.1_chr1 | 804738 | 813954 | + | – | ||
n.a. | E3 ubiquitin-protein ligase orthrus-like protein; TAIR: AT1G57820.1 Zinc finger (C3HC4-type RING finger) family protein; Swiss-Prot: sp|Q8VYZ0|ORTH2_ARATH E3 ubiquitin-protein ligase ORTHRUS 2; TrEMBL-Plants: tr|I1JJU5|I1JJU5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0004400 | LjG1.1_chr1 | 806178 | 813954 | + | – | ||
n.a. | E3 ubiquitin-protein ligase COP1; TAIR: AT2G32950.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|P93471|COP1_PEA E3 ubiquitin-protein ligase COP1; TrEMBL-Plants: tr|G7KH91|G7KH91_MEDTR E3 ubiquitin-protein ligase COP1; Found in the gene: LotjaGi1g1v0067500 | LjG1.1_chr1 | 9342364 | 9354793 | - | – | ||
n.a. | E3 ubiquitin-protein ligase BRE1-like 2; TAIR: AT1G55250.5 histone mono-ubiquitination 2; Swiss-Prot: sp|Q9C895|BRE1B_ARATH E3 ubiquitin-protein ligase BRE1-like 2; TrEMBL-Plants: tr|A0A0B2SID2|A0A0B2SID2_GLYSO E3 ubiquitin-protein ligase BRE1-like 2; Found in the gene: LotjaGi1g1v0068000 | LjG1.1_chr1 | 9411375 | 9422801 | + | – |