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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001680
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We have found 837 results. Now displaying 8 of 17 with 50 rows per page. This search has taken 5.988s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. Transcriptional corepressor LEUNIG; TAIR: AT2G32700.6 LEUNIG-like protein; Swiss-Prot: sp|O48847|LUH_ARATH Transcriptional corepressor LEUNIG_HOMOLOG; TrEMBL-Plants: tr|A0A0R0HRM1|A0A0R0HRM1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0199000 LjG1.1_chr1 42118121 42134951 +
n.a. Transcriptional corepressor LEUNIG; TAIR: AT2G32700.1 LEUNIG-like protein; Swiss-Prot: sp|O48847|LUH_ARATH Transcriptional corepressor LEUNIG_HOMOLOG; TrEMBL-Plants: tr|I1LA80|I1LA80_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0199000 LjG1.1_chr1 42118155 42134931 +
n.a. Transcriptional corepressor LEUNIG; TAIR: AT2G32700.6 LEUNIG-like protein; Swiss-Prot: sp|O48847|LUH_ARATH Transcriptional corepressor LEUNIG_HOMOLOG; TrEMBL-Plants: tr|A0A0R0HRJ8|A0A0R0HRJ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0199000 LjG1.1_chr1 42118155 42134931 +
n.a. Transcriptional corepressor LEUNIG; TAIR: AT2G32700.1 LEUNIG-like protein; Swiss-Prot: sp|O48847|LUH_ARATH Transcriptional corepressor LEUNIG_HOMOLOG; TrEMBL-Plants: tr|A0A0R0I0F4|A0A0R0I0F4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0199000 LjG1.1_chr1 42118155 42134931 +
n.a. Transcriptional corepressor LEUNIG; TAIR: AT2G32700.1 LEUNIG-like protein; Swiss-Prot: sp|O48847|LUH_ARATH Transcriptional corepressor LEUNIG_HOMOLOG; TrEMBL-Plants: tr|I1LA80|I1LA80_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0199000 LjG1.1_chr1 42118645 42131860 +
n.a. Transcriptional corepressor LEUNIG; TAIR: AT2G32700.1 LEUNIG-like protein; Swiss-Prot: sp|O48847|LUH_ARATH Transcriptional corepressor LEUNIG_HOMOLOG; TrEMBL-Plants: tr|I1LA80|I1LA80_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0199000 LjG1.1_chr1 42118645 42131860 +
n.a. Transcriptional corepressor LEUNIG; TAIR: AT2G32700.6 LEUNIG-like protein; Swiss-Prot: sp|O48847|LUH_ARATH Transcriptional corepressor LEUNIG_HOMOLOG; TrEMBL-Plants: tr|A0A0R0HRJ8|A0A0R0HRJ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0199000 LjG1.1_chr1 42118645 42131860 +
n.a. Transcriptional corepressor LEUNIG; TAIR: AT2G32700.1 LEUNIG-like protein; Swiss-Prot: sp|O48847|LUH_ARATH Transcriptional corepressor LEUNIG_HOMOLOG; TrEMBL-Plants: tr|I1LA80|I1LA80_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0199000 LjG1.1_chr1 42118645 42134496 +
n.a. Eukaryotic translation initiation factor 3 subunit I; TAIR: AT3G15610.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q54LT8|STRAP_DICDI Serine-threonine kinase receptor-associated protein; TrEMBL-Plants: tr|A0A151S8K4|A0A151S8K4_CAJCA Serine-threonine kinase receptor-associated protein; Found in the gene: LotjaGi1g1v0201300 LjG1.1_chr1 42619433 42626906 +
n.a. Eukaryotic translation initiation factor 3 subunit I; TAIR: AT1G15470.2 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q54LT8|STRAP_DICDI Serine-threonine kinase receptor-associated protein; TrEMBL-Plants: tr|I1MUD8|I1MUD8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0201300 LjG1.1_chr1 42621024 42625937 +
n.a. WD-repeat protein; TAIR: AT4G33270.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q54MZ3|CDC20_DICDI Anaphase-promoting complex subunit cdc20; TrEMBL-Plants: tr|A0A151SFQ0|A0A151SFQ0_CAJCA Anaphase-promoting complex subunit cdc20; Found in the gene: LotjaGi1g1v0202500 LjG1.1_chr1 43022102 43025720 -
n.a. WD-repeat protein, putative; TAIR: AT3G42660.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|O13046|WDHD1_XENLA WD repeat and HMG-box DNA-binding protein 1; TrEMBL-Plants: tr|G7IT11|G7IT11_MEDTR Transducin family protein/WD-40 repeat protein; Found in the gene: LotjaGi1g1v0208800 LjG1.1_chr1 45784222 45789657 -
n.a. WD-repeat protein; TAIR: AT4G33260.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q9SZA4|CDC21_ARATH Cell division cycle 20.1, cofactor of APC complex; TrEMBL-Plants: tr|K7LIT2|K7LIT2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0210300 LjG1.1_chr1 46004455 46009200 -
n.a. Transducin/WD40 repeat protein; TAIR: AT5G60940.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q8L4J2|CTF50_ARATH Cleavage stimulation factor subunit 50; TrEMBL-Plants: tr|G7IGS9|G7IGS9_MEDTR Cleavage stimulation factor 50 kDa subunit; Found in the gene: LotjaGi1g1v0212000 LjG1.1_chr1 46671896 46679818 +
n.a. Wd40-repeat-like protein; TAIR: AT5G60940.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q8L4J2|CTF50_ARATH Cleavage stimulation factor subunit 50; TrEMBL-Plants: tr|I1KD31|I1KD31_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0212000 LjG1.1_chr1 46671927 46679742 +
n.a. Wd40-repeat-like protein; TAIR: AT5G60940.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q8L4J2|CTF50_ARATH Cleavage stimulation factor subunit 50; TrEMBL-Plants: tr|I1KD31|I1KD31_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0212000 LjG1.1_chr1 46672115 46679348 +
n.a. Wd40-repeat-like protein; TAIR: AT5G60940.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q8L4J2|CTF50_ARATH Cleavage stimulation factor subunit 50; TrEMBL-Plants: tr|I1KD31|I1KD31_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0212000 LjG1.1_chr1 46674780 46679348 +
n.a. WD40 repeat-like protein; TAIR: AT5G50230.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q6NNP0|ATG16_ARATH Autophagy-related protein 16; TrEMBL-Plants: tr|V7CBB8|V7CBB8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0230400 LjG1.1_chr1 53946822 53950510 +
n.a. Transducin/WD40 repeat protein; TAIR: AT1G78070.2 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03; TrEMBL-Plants: tr|A0A0L9UG10|A0A0L9UG10_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0244600 LjG1.1_chr1 58727712 58733394 -
n.a. Transducin/WD40 repeat protein; TAIR: AT1G78070.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03; TrEMBL-Plants: tr|A0A0L9UG10|A0A0L9UG10_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0244600 LjG1.1_chr1 58727712 58733394 -
n.a. Transducin/WD40 repeat protein; TAIR: AT1G78070.2 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03; TrEMBL-Plants: tr|A0A0L9UG10|A0A0L9UG10_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0244600 LjG1.1_chr1 58727766 58733392 -
n.a. Transducin/WD40 repeat protein; TAIR: AT1G78070.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03; TrEMBL-Plants: tr|A0A0L9UG10|A0A0L9UG10_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0244600 LjG1.1_chr1 58727813 58733358 -
n.a. Transducin/WD40 repeat protein; TAIR: AT1G78070.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03; TrEMBL-Plants: tr|A0A0L9UG10|A0A0L9UG10_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0244600 LjG1.1_chr1 58728128 58729529 -
n.a. Transducin/WD40 repeat protein; TAIR: AT1G78070.2 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03; TrEMBL-Plants: tr|A0A0L9UG10|A0A0L9UG10_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0244600 LjG1.1_chr1 58728128 58729597 -
n.a. Transducin/WD40 repeat protein; TAIR: AT1G78070.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03; TrEMBL-Plants: tr|A0A0L9UG10|A0A0L9UG10_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0244600 LjG1.1_chr1 58728128 58733274 -
n.a. Transducin/WD40 repeat protein; TAIR: AT1G78070.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03; TrEMBL-Plants: tr|A0A0L9UG10|A0A0L9UG10_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0244600 LjG1.1_chr1 58728128 58733277 -
n.a. WD-repeat protein, putative; TAIR: AT5G24320.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9XSC3|WDR44_BOVIN WD repeat-containing protein 44; TrEMBL-Plants: tr|I1KAV6|I1KAV6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0289900 LjG1.1_chr1 70330400 70336307 -
n.a. WD-repeat protein, putative; TAIR: AT5G24320.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9XSC3|WDR44_BOVIN WD repeat-containing protein 44; TrEMBL-Plants: tr|I1KAV6|I1KAV6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0289900 LjG1.1_chr1 70330400 70336307 -
n.a. WD-repeat 1; TAIR: AT5G24520.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9XGN1|TTG1_ARATH Protein TRANSPARENT TESTA GLABRA 1; TrEMBL-Plants: tr|C0A1G9|C0A1G9_LOTJA WD40 repeats protein LjTTG1; Found in the gene: LotjaGi1g1v0299500 LjG1.1_chr1 72429694 72430743 -
n.a. WD repeat domain phosphoinositide-interacting protein; TAIR: AT3G56440.1 yeast autophagy 18 D-like protein; Swiss-Prot: sp|Q0WPK3|AT18D_ARATH Autophagy-related protein 18d; TrEMBL-Plants: tr|K7KUZ3|K7KUZ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0304000 LjG1.1_chr1 74166953 74171918 -
n.a. WD repeat domain phosphoinositide-interacting protein; TAIR: AT3G56440.1 yeast autophagy 18 D-like protein; Swiss-Prot: sp|Q0WPK3|AT18D_ARATH Autophagy-related protein 18d; TrEMBL-Plants: tr|K7KUZ5|K7KUZ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0304000 LjG1.1_chr1 74167255 74170409 -
n.a. WD repeat domain phosphoinositide-interacting protein; TAIR: AT3G56440.2 yeast autophagy 18 D-like protein; Swiss-Prot: sp|Q0WPK3|AT18D_ARATH Autophagy-related protein 18d; TrEMBL-Plants: tr|I1JYD8|I1JYD8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0304000 LjG1.1_chr1 74167946 74170409 -
n.a. WD-repeat protein, putative; TAIR: AT5G24320.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q6LA54|YF48_SCHPO Uncharacterized WD repeat-containing protein C3H5.08c; TrEMBL-Plants: tr|I1JY39|I1JY39_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0317000 LjG1.1_chr1 76397263 76413711 +
n.a. WD-repeat protein, putative; TAIR: AT5G24320.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q6LA54|YF48_SCHPO Uncharacterized WD repeat-containing protein C3H5.08c; TrEMBL-Plants: tr|I1JY39|I1JY39_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0317000 LjG1.1_chr1 76406544 76413711 +
n.a. WD-repeat protein, putative; TAIR: AT5G24320.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q6LA54|YF48_SCHPO Uncharacterized WD repeat-containing protein C3H5.08c; TrEMBL-Plants: tr|I1JY39|I1JY39_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0317000 LjG1.1_chr1 76407071 76413657 +
n.a. WD-repeat protein, putative; TAIR: AT5G24320.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q6LA54|YF48_SCHPO Uncharacterized WD repeat-containing protein C3H5.08c; TrEMBL-Plants: tr|I1JY39|I1JY39_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0317000 LjG1.1_chr1 76408035 76413568 +
n.a. WD40 repeat-containing protein; TAIR: AT5G50970.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q42384|PRL1_ARATH Protein pleiotropic regulatory locus 1; TrEMBL-Plants: tr|A0A151SY43|A0A151SY43_CAJCA Putative WD repeat-containing protein alr2800 family; Found in the gene: LotjaGi1g1v0332900 LjG1.1_chr1 79060653 79066099 -
n.a. BEACH domain-containing protein lvsC; TAIR: AT1G58230.1 binding protein; Swiss-Prot: sp|F4I9T0|BCHB_ARATH BEACH domain-containing protein B; TrEMBL-Plants: tr|A0A0R0K6C6|A0A0R0K6C6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0344900 LjG1.1_chr1 81118291 81157963 -
n.a. BEACH domain-containing protein lvsC; TAIR: AT1G58230.2 binding protein; Swiss-Prot: sp|F4I9T0|BCHB_ARATH BEACH domain-containing protein B; TrEMBL-Plants: tr|A0A0R0K6C6|A0A0R0K6C6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0344900 LjG1.1_chr1 81120859 81157025 -
n.a. BEACH domain-containing protein lvsC; TAIR: AT1G58230.2 binding protein; Swiss-Prot: sp|F4I9T0|BCHB_ARATH BEACH domain-containing protein B; TrEMBL-Plants: tr|A0A0R0K6C6|A0A0R0K6C6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0344900 LjG1.1_chr1 81120859 81157025 -
n.a. BEACH domain-containing protein lvsC; TAIR: AT1G58230.1 binding protein; Swiss-Prot: sp|F4I9T0|BCHB_ARATH BEACH domain-containing protein B; TrEMBL-Plants: tr|A0A0R0K6C6|A0A0R0K6C6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0344900 LjG1.1_chr1 81120859 81157025 -
n.a. Eukaryotic translation initiation factor 3 subunit I; TAIR: AT2G46290.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q38884|EIF3I_ARATH Eukaryotic translation initiation factor 3 subunit I; TrEMBL-Plants: tr|I1J582|I1J582_SOYBN Eukaryotic translation initiation factor 3 subunit I; Found in the gene: LotjaGi1g1v0345700 LjG1.1_chr1 81235119 81239362 -
n.a. Eukaryotic translation initiation factor 3 subunit I; TAIR: AT2G46290.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q38884|EIF3I_ARATH Eukaryotic translation initiation factor 3 subunit I; TrEMBL-Plants: tr|I1J582|I1J582_SOYBN Eukaryotic translation initiation factor 3 subunit I; Found in the gene: LotjaGi1g1v0345700 LjG1.1_chr1 81235990 81239188 -
n.a. Eukaryotic translation initiation factor 3 subunit I; TAIR: AT2G46290.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q38884|EIF3I_ARATH Eukaryotic translation initiation factor 3 subunit I; TrEMBL-Plants: tr|A0A151TGP4|A0A151TGP4_CAJCA Eukaryotic translation initiation factor 3 subunit I; Found in the gene: LotjaGi1g1v0345700 LjG1.1_chr1 81237543 81239188 -
n.a. WD and tetratricopeptide repeat protein, putative; TAIR: AT5G10940.2 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q8N5D0|WDTC1_HUMAN WD and tetratricopeptide repeats protein 1; TrEMBL-Plants: tr|A0A0B2PL15|A0A0B2PL15_GLYSO WD and tetratricopeptide repeats protein 1; Found in the gene: LotjaGi1g1v0349000 LjG1.1_chr1 81822635 81835926 +
n.a. WD and tetratricopeptide repeat protein, putative; TAIR: AT5G10940.2 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q8N5D0|WDTC1_HUMAN WD and tetratricopeptide repeats protein 1; TrEMBL-Plants: tr|I1K9P1|I1K9P1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0349000 LjG1.1_chr1 81822812 81833032 +
n.a. WD and tetratricopeptide repeat protein, putative; TAIR: AT5G10940.2 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q8N5D0|WDTC1_HUMAN WD and tetratricopeptide repeats protein 1; TrEMBL-Plants: tr|I1JV48|I1JV48_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0349000 LjG1.1_chr1 81823107 81834740 +
n.a. WD40 repeat-like protein; TAIR: AT1G27840.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q13216|ERCC8_HUMAN DNA excision repair protein ERCC-8; TrEMBL-Plants: tr|I1K866|I1K866_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0360500 LjG1.1_chr1 83540885 83546486 +
n.a. Transducin/WD40 repeat protein; TAIR: AT5G25150.1 TBP-associated factor 5; Swiss-Prot: sp|Q6S7B0|TAF5_ARATH Transcription initiation factor TFIID subunit 5; TrEMBL-Plants: tr|G7J9V2|G7J9V2_MEDTR TBP-associated factor 5; Found in the gene: LotjaGi1g1v0378200 LjG1.1_chr1 85773076 85788707 +
n.a. Transcriptional corepressor leunig-like protein; TAIR: AT4G32551.1 transcriptional corepressor LEUNIG; Swiss-Prot: sp|Q9FUY2|LEUNG_ARATH Transcriptional corepressor LEUNIG; TrEMBL-Plants: tr|V7ATR4|V7ATR4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0388300 LjG1.1_chr1 87193700 87203329 +