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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002182
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We have found 683 results. Now displaying 7 of 14 with 50 rows per page. This search has taken 5.460s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj6g3v0792100.1
n.a. NBS-containing resistance-like protein [Medicago truncatula] gi|357460983|ref|XP_003600773.1| chr6 7810951 7811555 +
2 domain predictions
1 GO term
Lj6g3v0920290.1
n.a. NBS resistance protein [Populus trichocarpa] gi|224114113|ref|XP_002316671.1| chr6 9234629 9235927 -
2 domain predictions
1 GO term
Lj6g3v0920300.1
n.a. NBS-LRR disease resistance protein [Musa balbisiana x Musa textilis] gi|166084743|emb|CAP66368.1| chr6 9236831 9238145 -
2 domain predictions
1 GO term
Lj6g3v0931320.1
n.a. Disease resistance-like protein GS4-1 [Medicago truncatula] gi|357449965|ref|XP_003595259.1| chr6 10255127 10256954 -
2 domain predictions
1 GO term
Lj6g3v0936950.1
n.a. Disease resistance-like protein GS4-1 [Medicago truncatula] gi|357449965|ref|XP_003595259.1| chr6 10446728 10450967 +
2 domain predictions
1 GO term
Lj6g3v0936950.2
n.a. Disease resistance-like protein GS4-1 [Medicago truncatula] gi|357449965|ref|XP_003595259.1| chr6 10446728 10450967 +
2 domain predictions
1 GO term
Lj6g3v1007870.1
n.a. NBS-LRR resistance-like protein 1N [Medicago truncatula] gi|357458159|ref|XP_003599360.1| chr6 11015951 11021796 -
2 domain predictions
1 GO term
Lj6g3v1038830.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356497765|ref|XP_003517729.1| chr6 11632358 11644294 -
2 domain predictions
1 GO term
Lj6g3v1303020.1
n.a. Disease resistance RPP8-like protein [Medicago truncatula] gi|357449695|ref|XP_003595124.1| chr6 15530475 15534484 -
2 domain predictions
1 GO term
Lj6g3v1601950.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356545122|ref|XP_003540994.1| chr6 18033720 18035927 -
2 domain predictions
1 GO term
Lj6g3v1601950.2
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356545124|ref|XP_003540995.1| chr6 18036007 18043589 -
2 domain predictions
1 GO term
Lj6g3v1707220.1
n.a. NBS-containing resistance-like protein [Medicago truncatula] gi|357460983|ref|XP_003600773.1| chr6 19293458 19301750 -
2 domain predictions
1 GO term
Lj6g3v1707230.1
n.a. NBS-containing resistance-like protein [Medicago truncatula] gi|357460983|ref|XP_003600773.1| chr6 19301931 19304782 -
2 domain predictions
1 GO term
Lj6g3v2006450.1
n.a. NB-LRR type disease resistance protein Rps1-k-2 [Medicago truncatula] gi|357457003|ref|XP_003598782.1| chr6 23504829 23512287 +
2 domain predictions
1 GO term
Lj6g3v2043010.1
n.a. NB-LRR type disease resistance protein Rps1-k-2 [Medicago truncatula] gi|357457003|ref|XP_003598782.1| chr6 24057331 24064809 +
2 domain predictions
1 GO term
Lj6g3v2192320.1
n.a. PREDICTED: disease resistance protein At4g27190-like [Vitis vinifera] gi|359488027|ref|XP_002269288.2| chr6 25325450 25326940 +
2 domain predictions
1 GO term
Lj6g3v2218100.1
n.a. PREDICTED: disease resistance protein At4g27190-like [Vitis vinifera] gi|359488027|ref|XP_002269288.2| chr6 25644030 25652240 -
2 domain predictions
1 GO term
Lj6g3v2218110.1
n.a. PREDICTED: disease resistance protein At4g27190-like [Vitis vinifera] gi|359488027|ref|XP_002269288.2| chr6 25647077 25651094 -
2 domain predictions
1 GO term
LotjaGi1g1v0009900.1
n.a. Disease resistance protein (NBS-LRR class) family; TAIR: AT4G27190.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9T048|DRL27_ARATH Disease resistance protein At4g27190; TrEMBL-Plants: tr|K7LQ17|K7LQ17_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0009900 LjG1.1_chr1 1239887 1253211 -
2 domain predictions
1 GO term
LotjaGi1g1v0009900.2
n.a. Disease resistance protein (NBS-LRR class) family; TAIR: AT4G27190.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9T048|DRL27_ARATH Disease resistance protein At4g27190; TrEMBL-Plants: tr|K7LQ17|K7LQ17_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0009900 LjG1.1_chr1 1239938 1253273 -
2 domain predictions
1 GO term
LotjaGi1g1v0009900.3
n.a. Disease resistance protein (NBS-LRR class) family; TAIR: AT4G27190.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9T048|DRL27_ARATH Disease resistance protein At4g27190; TrEMBL-Plants: tr|K7LQ17|K7LQ17_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0009900 LjG1.1_chr1 1241945 1248648 -
2 domain predictions
1 GO term
LotjaGi1g1v0010000.1
n.a. Disease resistance protein (NBS-LRR class) family; TAIR: AT4G27190.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9T048|DRL27_ARATH Disease resistance protein At4g27190; TrEMBL-Plants: tr|K7LQ17|K7LQ17_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0010000 LjG1.1_chr1 1254228 1263104 -
2 domain predictions
1 GO term
LotjaGi1g1v0010000.2
n.a. Disease resistance protein (NBS-LRR class) family; TAIR: AT4G27190.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9T048|DRL27_ARATH Disease resistance protein At4g27190; TrEMBL-Plants: tr|K7LQ17|K7LQ17_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0010000 LjG1.1_chr1 1254228 1263104 -
2 domain predictions
1 GO term
LotjaGi1g1v0010000.3
n.a. CC-NBS-LRR disease resistance protein; TAIR: AT4G27190.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9T048|DRL27_ARATH Disease resistance protein At4g27190; TrEMBL-Plants: tr|K7LQ17|K7LQ17_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0010000 LjG1.1_chr1 1254228 1263104 -
2 domain predictions
1 GO term
LotjaGi1g1v0010000.4
n.a. Disease resistance protein (NBS-LRR class) family; TAIR: AT4G27190.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9T048|DRL27_ARATH Disease resistance protein At4g27190; TrEMBL-Plants: tr|K7LQ17|K7LQ17_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0010000 LjG1.1_chr1 1254481 1263103 -
2 domain predictions
1 GO term
LotjaGi1g1v0010000.5
n.a. Disease resistance protein (NBS-LRR class) family; TAIR: AT4G27190.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9T048|DRL27_ARATH Disease resistance protein At4g27190; TrEMBL-Plants: tr|K7LQ17|K7LQ17_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0010000 LjG1.1_chr1 1254481 1263103 -
2 domain predictions
1 GO term
LotjaGi1g1v0010000.6
n.a. CC-NBS-LRR disease resistance protein; TAIR: AT4G27190.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9T048|DRL27_ARATH Disease resistance protein At4g27190; TrEMBL-Plants: tr|K7LQ17|K7LQ17_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0010000 LjG1.1_chr1 1254481 1263103 -
2 domain predictions
1 GO term
LotjaGi1g1v0010000.7
n.a. Disease resistance protein (NBS-LRR class) family; TAIR: AT4G27190.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9T048|DRL27_ARATH Disease resistance protein At4g27190; TrEMBL-Plants: tr|K7LQ17|K7LQ17_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0010000 LjG1.1_chr1 1254601 1263023 -
2 domain predictions
1 GO term
LotjaGi1g1v0032900.1
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT1G72930.1 toll/interleukin-1 receptor-like protein; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7K8G5|G7K8G5_MEDTR NB-ARC domain protein; Found in the gene: LotjaGi1g1v0032900 LjG1.1_chr1 4203609 4207284 -
2 domain predictions
1 GO term
LotjaGi1g1v0033000.1
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT1G72930.1 toll/interleukin-1 receptor-like protein; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7K8F2|G7K8F2_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi1g1v0033000 LjG1.1_chr1 4207492 4210218 -
2 domain predictions
1 GO term
LotjaGi1g1v0033100.1
n.a. NBS-LRR disease resistance protein; TAIR: AT5G66900.1 Disease resistance protein (CC-NBS-LRR class) family; Swiss-Prot: sp|Q9FKZ1|DRL42_ARATH Probable disease resistance protein At5g66900; TrEMBL-Plants: tr|A0A072TSV7|A0A072TSV7_MEDTR LRR and NB-ARC domain disease resistance protein; Found in the gene: LotjaGi1g1v0033100 LjG1.1_chr1 4220436 4235663 -
2 domain predictions
1 GO term
LotjaGi1g1v0033200.1
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT1G72930.1 toll/interleukin-1 receptor-like protein; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7K3J1|G7K3J1_MEDTR TIR-like domain protein TSDC protein; Found in the gene: LotjaGi1g1v0033200 LjG1.1_chr1 4268523 4274075 -
2 domain predictions
1 GO term
LotjaGi1g1v0033200.2
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT1G72930.1 toll/interleukin-1 receptor-like protein; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7K3J1|G7K3J1_MEDTR TIR-like domain protein TSDC protein; Found in the gene: LotjaGi1g1v0033200 LjG1.1_chr1 4271056 4274067 -
2 domain predictions
1 GO term
LotjaGi1g1v0033300.1
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT4G09430.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7K8F2|G7K8F2_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi1g1v0033300 LjG1.1_chr1 4341975 4344907 -
2 domain predictions
1 GO term
LotjaGi1g1v0033300.2
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT1G72930.1 toll/interleukin-1 receptor-like protein; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7K8F2|G7K8F2_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi1g1v0033300 LjG1.1_chr1 4347609 4351828 -
2 domain predictions
1 GO term
LotjaGi1g1v0033400.1
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT4G09430.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7K8F2|G7K8F2_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi1g1v0033400 LjG1.1_chr1 4356656 4364497 -
2 domain predictions
1 GO term
LotjaGi1g1v0033600.1
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT4G09430.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7K8F2|G7K8F2_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi1g1v0033600 LjG1.1_chr1 4368696 4373317 -
2 domain predictions
1 GO term
LotjaGi1g1v0033600.2
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT4G09430.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7K8F2|G7K8F2_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi1g1v0033600 LjG1.1_chr1 4368696 4373317 -
2 domain predictions
1 GO term
LotjaGi1g1v0033700.1
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT1G72930.1 toll/interleukin-1 receptor-like protein; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7K8F2|G7K8F2_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi1g1v0033700 LjG1.1_chr1 4391282 4394925 -
2 domain predictions
1 GO term
LotjaGi1g1v0044700_LC.1
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT1G27170.1 transmembrane receptors / ATP binding protein; Swiss-Prot: sp|Q9FI14|TAO1_ARATH Disease resistance protein TAO1; TrEMBL-Plants: tr|V7B984|V7B984_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0044700_LC LjG1.1_chr1 6081064 6081637 -
2 domain predictions
1 GO term
LotjaGi1g1v0045000_LC.1
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7K3B3|G7K3B3_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi1g1v0045000_LC LjG1.1_chr1 6114305 6118120 +
2 domain predictions
1 GO term
LotjaGi1g1v0045000_LC.3
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7K3B3|G7K3B3_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi1g1v0045000_LC LjG1.1_chr1 6114305 6118120 +
2 domain predictions
1 GO term
LotjaGi1g1v0045000_LC.5
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7K3B3|G7K3B3_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi1g1v0045000_LC LjG1.1_chr1 6114313 6117992 +
2 domain predictions
1 GO term
LotjaGi1g1v0045100.1
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A0B2S2J6|A0A0B2S2J6_GLYSO TMV resistance protein N; Found in the gene: LotjaGi1g1v0045100 LjG1.1_chr1 6127841 6133448 +
2 domain predictions
1 GO term
LotjaGi1g1v0045100.2
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7K3B3|G7K3B3_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi1g1v0045100 LjG1.1_chr1 6128055 6133346 +
2 domain predictions
1 GO term
LotjaGi1g1v0054000.1
n.a. Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA39|RGA4_SOLBU Putative disease resistance protein RGA4; TrEMBL-Plants: tr|G7K728|G7K728_MEDTR Disease resistance protein RGA4; Found in the gene: LotjaGi1g1v0054000 LjG1.1_chr1 7633186 7637756 +
2 domain predictions
1 GO term
LotjaGi1g1v0054000.2
n.a. Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA39|RGA4_SOLBU Putative disease resistance protein RGA4; TrEMBL-Plants: tr|G7K728|G7K728_MEDTR Disease resistance protein RGA4; Found in the gene: LotjaGi1g1v0054000 LjG1.1_chr1 7633461 7637689 +
2 domain predictions
1 GO term
LotjaGi1g1v0054800.1
n.a. Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3; TrEMBL-Plants: tr|G7K723|G7K723_MEDTR Disease resistance protein RGA4; Found in the gene: LotjaGi1g1v0054800 LjG1.1_chr1 7750757 7771823 -
2 domain predictions
1 GO term
LotjaGi1g1v0054800.2
n.a. Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3; TrEMBL-Plants: tr|G7K723|G7K723_MEDTR Disease resistance protein RGA4; Found in the gene: LotjaGi1g1v0054800 LjG1.1_chr1 7751014 7771720 -
2 domain predictions
1 GO term
LotjaGi1g1v0054800.3
n.a. Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3; TrEMBL-Plants: tr|G7K723|G7K723_MEDTR Disease resistance protein RGA4; Found in the gene: LotjaGi1g1v0054800 LjG1.1_chr1 7764588 7771823 -
2 domain predictions
1 GO term