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The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.
We have found 62 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 5.496s to perform.
Transcript | Name | Description | Chr | Start | End | Strand | Domain predictions | GO predictions |
---|---|---|---|---|---|---|---|---|
n.a. | PREDICTED: cathepsin B-like [Glycine max] gi|356572872|ref|XP_003554589.1| | chr0 | 17728277 | 17733704 | + | – | ||
n.a. | Senescence-associated gene 12 [Theobroma cacao] gi|508702326|gb|EOX94222.1| | chr0 | 42921000 | 42924125 | + | – | ||
n.a. | Calpain-like protein [Medicago truncatula] gi|357519297|ref|XP_003629937.1| | chr0 | 58630780 | 58633904 | + | – | ||
n.a. | PREDICTED: LOW QUALITY PROTEIN: xylem cysteine proteinase 1-like [Cicer arietinum] gi|502078248|ref|XP_004485885.1| | chr0 | 76605876 | 76607494 | + | – | ||
n.a. | PREDICTED: KDEL-tailed cysteine endopeptidase CEP2-like [Cicer arietinum] gi|502143938|ref|XP_004505522.1| | chr0 | 120379854 | 120381189 | - | – | ||
n.a. | PREDICTED: cysteine proteinase 15A [Glycine max] gi|356564325|ref|XP_003550405.1| | chr0 | 134891666 | 134894781 | + | – | ||
n.a. | cysteine proteinase precursor [Glycine max] gi|351721126|ref|NP_001237199.1| | chr0 | 149461775 | 149465973 | + | – | ||
n.a. | cysteine proteinase [Lotus japonicus] gi|144905116|dbj|BAF56430.1| | chr0 | 156241215 | 156242388 | + | – | ||
n.a. | PREDICTED: cysteine proteinase RD21a-like [Glycine max] gi|356563584|ref|XP_003550041.1| | chr1 | 25471394 | 25473788 | - | – | ||
n.a. | PREDICTED: oryzain alpha chain-like [Cicer arietinum] gi|502131381|ref|XP_004500967.1| | chr1 | 25694581 | 25697260 | - | – | ||
n.a. | PREDICTED: cysteine proteinase RD19a-like [Glycine max] gi|356509908|ref|XP_003523684.1| | chr1 | 25764771 | 25767284 | + | – | ||
n.a. | PREDICTED: xylem cysteine proteinase 2-like [Glycine max] gi|356517188|ref|XP_003527271.1| | chr1 | 39208042 | 39209908 | + | – | ||
n.a. | cysteine proteinase [Lotus japonicus] gi|144905108|dbj|BAF56428.1| | chr1 | 47739823 | 47741197 | - | – | ||
n.a. | cysteine proteinase [Lotus japonicus] gi|144905116|dbj|BAF56430.1| | chr1 | 47761044 | 47762165 | - | – | ||
n.a. | cysteine proteinase [Lotus japonicus] gi|144905108|dbj|BAF56428.1| | chr1 | 47764683 | 47766120 | - | – | ||
n.a. | cysteine proteinase [Lotus japonicus] gi|144905108|dbj|BAF56428.1| | chr1 | 47769409 | 47770624 | - | – | ||
n.a. | cysteine proteinase [Lotus japonicus] gi|144905116|dbj|BAF56430.1| | chr1 | 47773952 | 47775075 | - | – | ||
n.a. | PREDICTED: cathepsin B-like [Glycine max] gi|356505709|ref|XP_003521632.1| | chr1 | 58150447 | 58154358 | + | – | ||
n.a. | CM0216.510.nc [Lotus japonicus] gi|164605519|dbj|BAF98585.1| | chr3 | 977264 | 979016 | + | – | ||
n.a. | CM0216.500.nc [Lotus japonicus] gi|164605518|dbj|BAF98584.1| | chr3 | 983337 | 984924 | + | – | ||
n.a. | cysteine proteinase [Lotus japonicus] gi|409190991|gb|AFV30165.1| | chr3 | 20904157 | 20905269 | + | – | ||
n.a. | cysteine proteinase [Lotus japonicus] gi|144905104|dbj|BAF56427.1| | chr3 | 20939116 | 20940233 | + | – | ||
n.a. | PREDICTED: vignain-like [Glycine max] gi|356563155|ref|XP_003549830.1| | chr4 | 22045501 | 22047303 | - | – | ||
n.a. | PREDICTED: cysteine proteinase RD21a-like [Cicer arietinum] gi|502125689|ref|XP_004499026.1| | chr5 | 2628473 | 2632929 | + | – | ||
n.a. | PREDICTED: cysteine proteinase RD21a-like isoform X1 [Cicer arietinum] gi|502120445|ref|XP_004496965.1| | chr5 | 30633092 | 30635902 | - | – | ||
n.a. | Cysteine proteinase [Medicago truncatula] gi|357446993|ref|XP_003593772.1| | chr6 | 23120617 | 23122406 | - | – | ||
n.a. | Cysteine proteinase [Medicago truncatula] gi|357446993|ref|XP_003593772.1| | chr6 | 23123100 | 23124553 | - | – | ||
n.a. | PREDICTED: LOW QUALITY PROTEIN: xylem cysteine proteinase 1-like [Cicer arietinum] gi|502078248|ref|XP_004485885.1| | chr6 | 23148043 | 23149866 | - | – | ||
n.a. | Cysteine proteinase; TAIR: AT5G50260.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|P25803|CYSEP_PHAVU Vignain; TrEMBL-Plants: tr|I1KC88|I1KC88_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0230500 | LjG1.1_chr1 | 53964568 | 53970290 | + | – | ||
n.a. | Cysteine protease family protein; TAIR: AT1G09850.1 xylem bark cysteine peptidase 3; Swiss-Prot: sp|Q9LT78|RD21C_ARATH Probable cysteine protease RD21C; TrEMBL-Plants: tr|A0A1J7IIQ9|A0A1J7IIQ9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0423400 | LjG1.1_chr1 | 91757413 | 91763963 | - | – | ||
n.a. | Cysteine proteinase; TAIR: AT4G39090.1 Papain family cysteine protease; Swiss-Prot: sp|P25804|CYSP_PEA Cysteine proteinase 15A; TrEMBL-Plants: tr|A0A151RQM7|A0A151RQM7_CAJCA Cysteine proteinase RD19a; Found in the gene: LotjaGi1g1v0424400 | LjG1.1_chr1 | 91892437 | 91895727 | + | – | ||
n.a. | Cysteine proteinase; TAIR: AT4G35350.1 xylem cysteine peptidase 1; Swiss-Prot: sp|O65493|XCP1_ARATH Cysteine protease XCP1; TrEMBL-Plants: tr|I1K796|I1K796_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0569300 | LjG1.1_chr1 | 110228376 | 110230421 | + | – | ||
n.a. | Cathepsin B-like cysteine protease; TAIR: AT1G02305.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|P07858|CATB_HUMAN Cathepsin B; TrEMBL-Plants: tr|I3SCV5|I3SCV5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0753100 | LjG1.1_chr1 | 132587552 | 132595445 | + | – | ||
n.a. | Cathepsin B-like cysteine protease; TAIR: AT1G02305.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|Q4R5M2|CATB_MACFA Cathepsin B; TrEMBL-Plants: tr|I3SCV5|I3SCV5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0753100 | LjG1.1_chr1 | 132587552 | 132595445 | + | – | ||
n.a. | Cathepsin B-like cysteine protease; TAIR: AT1G02305.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|Q4R5M2|CATB_MACFA Cathepsin B; TrEMBL-Plants: tr|I3SCV5|I3SCV5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0753100 | LjG1.1_chr1 | 132587786 | 132591689 | + | – | ||
n.a. | Cathepsin B-like cysteine protease; TAIR: AT1G02305.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|P07858|CATB_HUMAN Cathepsin B; TrEMBL-Plants: tr|I3SCV5|I3SCV5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0753100 | LjG1.1_chr1 | 132587843 | 132591886 | + | – | ||
n.a. | Cysteine protease; TAIR: AT1G06260.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|Q9FJ47|SAG12_ARATH Senescence-specific cysteine protease SAG12; TrEMBL-Plants: tr|A0A1J7H619|A0A1J7H619_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0245200 | LjG1.1_chr3 | 40114770 | 40118851 | - | – | ||
n.a. | Cysteine protease; TAIR: AT1G06260.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|Q9FJ47|SAG12_ARATH Senescence-specific cysteine protease SAG12; TrEMBL-Plants: tr|G8A001|G8A001_MEDTR Papain family cysteine protease; Found in the gene: LotjaGi3g1v0245300 | LjG1.1_chr3 | 40120112 | 40121888 | - | – | ||
n.a. | Cysteine protease; TAIR: AT5G45890.1 senescence-associated gene 12; Swiss-Prot: sp|A2XQE8|SAG39_ORYSI Senescence-specific cysteine protease SAG39; TrEMBL-Plants: tr|K7K0Y1|K7K0Y1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0248000 | LjG1.1_chr3 | 40948841 | 40949961 | - | – | ||
n.a. | Cysteine protease, putative; TAIR: AT5G45890.1 senescence-associated gene 12; Swiss-Prot: sp|A2XQE8|SAG39_ORYSI Senescence-specific cysteine protease SAG39; TrEMBL-Plants: tr|K4MQ82|K4MQ82_LOTJA Cysteine proteinase; Found in the gene: LotjaGi3g1v0249300 | LjG1.1_chr3 | 41404768 | 41405940 | + | – | ||
n.a. | Cysteine protease, putative; TAIR: AT5G45890.1 senescence-associated gene 12; Swiss-Prot: sp|A2XQE8|SAG39_ORYSI Senescence-specific cysteine protease SAG39; TrEMBL-Plants: tr|A4PIZ3|A4PIZ3_LOTJA Cysteine proteinase; Found in the gene: LotjaGi3g1v0254300 | LjG1.1_chr3 | 43160081 | 43161221 | - | – | ||
n.a. | Cysteine protease; TAIR: AT5G45890.1 senescence-associated gene 12; Swiss-Prot: sp|A2XQE8|SAG39_ORYSI Senescence-specific cysteine protease SAG39; TrEMBL-Plants: tr|A4PIZ2|A4PIZ2_LOTJA Cysteine proteinase; Found in the gene: LotjaGi3g1v0489300 | LjG1.1_chr3 | 90722326 | 90723451 | + | – | ||
n.a. | Cysteine protease, putative; TAIR: AT5G45890.1 senescence-associated gene 12; Swiss-Prot: sp|A2XQE8|SAG39_ORYSI Senescence-specific cysteine protease SAG39; TrEMBL-Plants: tr|A4PIZ2|A4PIZ2_LOTJA Cysteine proteinase; Found in the gene: LotjaGi3g1v0489400 | LjG1.1_chr3 | 90726812 | 90728421 | + | – | ||
n.a. | Cysteine proteinase; TAIR: AT4G39090.1 Papain family cysteine protease; Swiss-Prot: sp|P43296|RD19A_ARATH Cysteine protease RD19A; TrEMBL-Plants: tr|B0BL96|B0BL96_LOTJA CM0216.510.nc protein; Found in the gene: LotjaGi3g1v0508700 | LjG1.1_chr3 | 92584990 | 92587220 | - | – | ||
n.a. | Cysteine proteinase; TAIR: AT4G39090.1 Papain family cysteine protease; Swiss-Prot: sp|P43296|RD19A_ARATH Cysteine protease RD19A; TrEMBL-Plants: tr|Q70I35|Q70I35_LOTJA Papain-like cysteine proteinase-like protein 2; Found in the gene: LotjaGi3g1v0512500 | LjG1.1_chr3 | 92941463 | 92943460 | + | – | ||
n.a. | Cysteine proteinase; TAIR: AT4G39090.1 Papain family cysteine protease; Swiss-Prot: sp|P43296|RD19A_ARATH Cysteine protease RD19A; TrEMBL-Plants: tr|B0BL95|B0BL95_LOTJA CM0216.500.nc protein; Found in the gene: LotjaGi3g1v0512700 | LjG1.1_chr3 | 92947665 | 92949409 | + | – | ||
n.a. | Cysteine protease; TAIR: AT1G47128.1 Granulin repeat cysteine protease family protein; Swiss-Prot: sp|P43297|RD21A_ARATH Cysteine proteinase RD21A; TrEMBL-Plants: tr|I1K268|I1K268_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0101100 | LjG1.1_chr4 | 13861458 | 13864891 | - | – | ||
n.a. | Cysteine protease, putative; TAIR: AT5G50260.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|P25803|CYSEP_PHAVU Vignain; TrEMBL-Plants: tr|A0A072UQV2|A0A072UQV2_MEDTR KDEL-tailed cysteine endopeptidase CEP1; Found in the gene: LotjaGi4g1v0226100 | LjG1.1_chr4 | 53533480 | 53535830 | - | – | ||
n.a. | Calpain, putative; TAIR: AT1G55350.1 calpain-type cysteine protease family; Swiss-Prot: sp|Q8RVL2|DEK1_ARATH Calpain-type cysteine protease DEK1; TrEMBL-Plants: tr|A0A151UC24|A0A151UC24_CAJCA Calpain-9; Found in the gene: LotjaGi4g1v0240000_LC | LjG1.1_chr4 | 55851931 | 55875754 | - | – | ||
n.a. | Calpain, putative; TAIR: AT1G55350.1 calpain-type cysteine protease family; Swiss-Prot: sp|Q8RVL2|DEK1_ARATH Calpain-type cysteine protease DEK1; TrEMBL-Plants: tr|A0A151UC24|A0A151UC24_CAJCA Calpain-9; Found in the gene: LotjaGi4g1v0240000_LC | LjG1.1_chr4 | 55851931 | 55876093 | - | – |