Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001611
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 861 results. Now displaying 6 of 18 with 50 rows per page. This search has taken 6.059s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v3223970.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357495155|ref|XP_003617866.1| chr2 41195118 41197721 +
4 domain predictions
1 GO term
Lj2g3v3223980.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356561434|ref|XP_003548986.1| chr2 41197851 41198769 +
2 domain predictions
1 GO term
Lj2g3v3316690.1
n.a. PREDICTED: DNA-damage-repair/toleration protein DRT100-like [Cicer arietinum] gi|502157974|ref|XP_004510977.1| chr2 41860598 41862104 -
3 domain predictions
1 GO term
Lj2g3v3318890.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g26540-like [Cicer arietinum] gi|502129028|ref|XP_004500157.1| chr2 41953060 41957456 +
2 domain predictions
1 GO term
Lj3g3v0018540.1
n.a. PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max] gi|356557231|ref|XP_003546921.1| chr3 366134 368251 -
2 domain predictions
1 GO term
Lj3g3v0044100.1
n.a. PREDICTED: internalin-A-like isoform X2 [Cicer arietinum] gi|502147908|ref|XP_004506963.1| chr3 509226 516712 -
3 domain predictions
1 GO term
Lj3g3v0397040.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140-like isoform X3 [Cicer arietinum] gi|502177302|ref|XP_004516051.1| chr3 3262874 3277527 -
2 domain predictions
1 GO term
Lj3g3v0397040.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140-like isoform X2 [Cicer arietinum] gi|502177298|ref|XP_004516050.1| chr3 3262874 3294883 -
2 domain predictions
1 GO term
Lj3g3v0397040.3
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140-like isoform X1 [Cicer arietinum] gi|502177294|ref|XP_004516049.1| chr3 3262874 3294883 -
2 domain predictions
1 GO term
Lj3g3v0423790.1
n.a. NBS-LRR resistance-like protein [Medicago truncatula] gi|357521387|ref|XP_003630982.1| chr3 3709334 3712514 +
2 domain predictions
1 GO term
Lj3g3v0478120.1
n.a. PREDICTED: DNA-damage-repair/toleration protein DRT100-like [Cicer arietinum] gi|502157974|ref|XP_004510977.1| chr3 5510240 5511987 +
2 domain predictions
1 GO term
Lj3g3v0948330.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357436695|ref|XP_003588623.1| chr3 11667085 11668417 +
2 domain predictions
1 GO term
Lj3g3v0999850.1
n.a. PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230-like [Glycine max] gi|356528726|ref|XP_003532950.1| chr3 13340877 13345645 +
2 domain predictions
1 GO term
Lj3g3v0999850.2
n.a. PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230-like [Glycine max] gi|356555150|ref|XP_003545899.1| chr3 13340877 13345645 +
3 domain predictions
1 GO term
Lj3g3v1064880.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53430-like [Cicer arietinum] gi|502164784|ref|XP_004513262.1| chr3 14387389 14396170 -
3 domain predictions
1 GO term
Lj3g3v1204560.1
n.a. PREDICTED: leucine-rich repeat-containing protein 9-like isoform X1 [Cicer arietinum] gi|502083492|ref|XP_004487476.1| chr3 15892973 15896032 +
3 domain predictions
1 GO term
Lj3g3v1393590.1
n.a. PREDICTED: F-box/LRR-repeat protein 3-like [Glycine max] gi|356506506|ref|XP_003522022.1| chr3 17752088 17756745 -
2 domain predictions
1 GO term
Lj3g3v1716740.1
n.a. DNA-damage-repair/toleration protein DRT100-like precursor [Glycine max] gi|359806061|ref|NP_001240925.1| chr3 21676267 21677935 -
2 domain predictions
1 GO term
Lj3g3v1876170.1
n.a. n.a. chr3 24137810 24146608 -
2 domain predictions
1 GO term
Lj3g3v2172690.2
n.a. PREDICTED: internalin-A-like isoform X1 [Cicer arietinum] gi|502147905|ref|XP_004506962.1| chr3 26998491 27006934 -
3 domain predictions
1 GO term
Lj3g3v2387590.1
n.a. PREDICTED: F-box/LRR-repeat protein 12-like isoform X1 [Cicer arietinum] gi|502156988|ref|XP_004510720.1| chr3 29699906 29701036 +
2 domain predictions
1 GO term
Lj3g3v2442070.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Glycine max] gi|356544283|ref|XP_003540583.1| chr3 30192898 30200838 +
2 domain predictions
1 GO term
Lj3g3v2532290.1
n.a. tyrosine-sulfated glycopeptide receptor 1-like precursor [Glycine max] gi|358248614|ref|NP_001239911.1| chr3 31100718 31103526 +
3 domain predictions
1 GO term
Lj3g3v2718830.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357454715|ref|XP_003597638.1| chr3 33211640 33217419 -
2 domain predictions
1 GO term
Lj3g3v2733950.1
n.a. Protein phosphatase 1 regulatory subunit [Medicago truncatula] gi|357520899|ref|XP_003630738.1| chr3 33595214 33599527 +
2 domain predictions
1 GO term
Lj3g3v2780560.1
n.a. PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 3-like [Glycine max] gi|356547026|ref|XP_003541919.1| chr3 34202739 34210328 -
3 domain predictions
1 GO term
Lj3g3v2823250.1
n.a. PREDICTED: receptor-like protein kinase HSL1-like [Glycine max] gi|356515144|ref|XP_003526261.1| chr3 34732287 34735805 +
2 domain predictions
1 GO term
Lj3g3v2823260.1
n.a. n.a. chr3 34732287 34735182 -
3 domain predictions
1 GO term
Lj3g3v2888220.1
n.a. Outer arm dynein light chain 1 protein [Arabidopsis thaliana] gi|30679417|ref|NP_192235.3| chr3 35662223 35677691 -
3 domain predictions
1 GO term
Lj3g3v3246320.1
n.a. PREDICTED: DNA-damage-repair/toleration protein DRT100-like [Cicer arietinum] gi|502148362|ref|XP_004507136.1| chr3 40097445 40098908 -
2 domain predictions
1 GO term
Lj3g3v3246330.1
n.a. PREDICTED: DNA-damage-repair/toleration protein DRT100-like [Cicer arietinum] gi|502148302|ref|XP_004507113.1| chr3 40101159 40102888 -
2 domain predictions
1 GO term
Lj3g3v3348680.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g16250-like [Glycine max] gi|356509565|ref|XP_003523518.1| chr3 41158487 41164700 -
2 domain predictions
1 GO term
Lj3g3v3375780.1
n.a. hypernodulation aberrant root formation protein [Lotus japonicus] gi|24940156|emb|CAD42335.1| chr3 41520707 41525609 +
3 domain predictions
1 GO term
Lj3g3v3724460.1
n.a. PREDICTED: leucine-rich repeat receptor-like protein kinase TDR-like [Glycine max] gi|356542427|ref|XP_003539668.1| chr3 45091580 45097818 -
3 domain predictions
1 GO term
Lj3g3v3752260.1
n.a. receptor-like protein kinase HSL1-like [Glycine max] gi|359807055|ref|NP_001241340.1| chr3 45418191 45423324 +
3 domain predictions
1 GO term
Lj4g3v0153950.1
n.a. Calcium-independent phospholipase A2-gamma [Medicago truncatula] gi|357480239|ref|XP_003610405.1| chr4 1829379 1837380 -
3 domain predictions
1 GO term
Lj4g3v0189790.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1-like [Glycine max] gi|356510820|ref|XP_003524132.1| chr4 2366534 2371382 -
2 domain predictions
1 GO term
Lj4g3v0286230.1
n.a. PREDICTED: disease resistance protein RGA2-like [Vitis vinifera] gi|359491491|ref|XP_003634282.1| chr4 3490569 3494256 -
2 domain predictions
1 GO term
Lj4g3v0423040.1
n.a. PREDICTED: receptor-like protein kinase 5-like [Vitis vinifera] gi|225470187|ref|XP_002268274.1| chr4 5588422 5591641 +
4 domain predictions
1 GO term
Lj4g3v0445480.1
n.a. PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like [Glycine max] gi|356527933|ref|XP_003532560.1| chr4 5849502 5854005 -
2 domain predictions
1 GO term
Lj4g3v0450430.1
n.a. PREDICTED: receptor-like protein kinase 5-like [Vitis vinifera] gi|225470187|ref|XP_002268274.1| chr4 6298559 6307394 -
4 domain predictions
1 GO term
Lj4g3v0484420.1
n.a. PREDICTED: receptor-like protein kinase HSL1-like [Cicer arietinum] gi|502142762|ref|XP_004505098.1| chr4 7718119 7722163 +
2 domain predictions
1 GO term
Lj4g3v0484430.1
n.a. PREDICTED: receptor-like protein kinase HSL1-like [Cicer arietinum] gi|502142762|ref|XP_004505098.1| chr4 7718119 7722443 +
2 domain predictions
1 GO term
Lj4g3v0938830.1
n.a. PREDICTED: acidic leucine-rich nuclear phosphoprotein 32-related protein-like [Glycine max] gi|356559408|ref|XP_003547991.1| chr4 13860515 13863656 +
2 domain predictions
1 GO term
Lj4g3v0938840.1
n.a. n.a. chr4 13860741 13864676 -
2 domain predictions
1 GO term
Lj4g3v1000040.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180-like [Cicer arietinum] gi|502161245|ref|XP_004512092.1| chr4 14516196 14518077 +
2 domain predictions
1 GO term
Lj4g3v1120510.1
n.a. Receptor-like protein kinase HAIKU2 [Medicago truncatula] gi|357446137|ref|XP_003593346.1| chr4 16859760 16863913 +
3 domain predictions
1 GO term
Lj4g3v1120510.2
n.a. Receptor-like protein kinase HAIKU2 [Medicago truncatula] gi|357446137|ref|XP_003593346.1| chr4 16859760 16863913 +
2 domain predictions
1 GO term
Lj4g3v1287400.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g12460-like [Cicer arietinum] gi|502160100|ref|XP_004511633.1| chr4 19013138 19016053 -
3 domain predictions
1 GO term
Lj4g3v1313820.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930-like [Glycine max] gi|356514131|ref|XP_003525760.1| chr4 19191299 19195034 -
3 domain predictions
1 GO term