Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

IPR039605

Source: InterPro

Description

IPR039605 is a AT-hook motif nuclear-localized protein.

<p>This entry includes AT-hook motif nuclear-localized protein 1-14 (AHL1-14) from Arabidopsis. They have two conserved structural units, the AT-hook motif and the Plant and Prokaryote Conserved (PPC) domain, the latter also known as DUF296. Members of the AHL family regulate diverse aspects of growth and development in plants [[cite:PUB00074291]]. AHL1 is a transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs) [[cite:PUB00074814]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003680
Molecular function AT DNA binding Interacting selectively and non-covalently with oligo(A) and oligo(T) tracts of DNA (AT DNA).
Subterm of

Associated Lotus transcripts 24

Transcript Name Description Predicted domains Domain count
LotjaGi1g1v0462800.1
– AT hook motif DNA-binding family protein; TAIR: AT4G12080.1 AT-hook motif nuclear-localized protein 1; Swiss-Prot: sp|Q8VYJ2|AHL1_ARATH AT-hook motif nuclear-localized protein 1; TrEMBL-Plants: tr|A0A151TB87|A0A151TB87_CAJCA Putative DNA-binding protein ESCAROLA; Found in the gene: LotjaGi1g1v0462800
Domains
10
LotjaGi1g1v0462800.2
– AT hook motif DNA-binding family protein; TAIR: AT4G12080.1 AT-hook motif nuclear-localized protein 1; Swiss-Prot: sp|Q8VYJ2|AHL1_ARATH AT-hook motif nuclear-localized protein 1; TrEMBL-Plants: tr|A0A151TB87|A0A151TB87_CAJCA Putative DNA-binding protein ESCAROLA; Found in the gene: LotjaGi1g1v0462800
Domains
10
LotjaGi1g1v0569400.1
– AT hook motif DNA-binding family protein; TAIR: AT2G33620.1 AT hook motif DNA-binding family protein; Swiss-Prot: sp|O22812|AHL10_ARATH AT-hook motif nuclear-localized protein 10; TrEMBL-Plants: tr|V7AUS6|V7AUS6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0569400
Domains
19
LotjaGi1g1v0786400.1
– AT hook motif DNA-binding family protein; TAIR: AT3G04590.2 AT hook motif DNA-binding family protein; Swiss-Prot: sp|A1L4X7|AHL14_ARATH AT-hook motif nuclear-localized protein 14; TrEMBL-Plants: tr|I1JRT6|I1JRT6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0786400
Domains
10
LotjaGi2g1v0160900_LC.1
– AT hook motif DNA-binding family protein; TAIR: AT4G12080.1 AT-hook motif nuclear-localized protein 1; Swiss-Prot: sp|Q8VYJ2|AHL1_ARATH AT-hook motif nuclear-localized protein 1; TrEMBL-Plants: tr|A0A0A0LB41|A0A0A0LB41_CUCSA Uncharacterized protein; Found in the gene: LotjaGi2g1v0160900_LC
Domains
9
LotjaGi2g1v0415000.1
– AT hook motif DNA-binding family protein; TAIR: AT4G17950.1 AT hook motif DNA-binding family protein; Swiss-Prot: sp|Q940I0|AHL13_ARATH AT-hook motif nuclear-localized protein 13; TrEMBL-Plants: tr|A0A0L9UQM7|A0A0L9UQM7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0415000
Domains
12
LotjaGi2g1v0427700.1
– AT hook, DNA-binding motif-containing protein; TAIR: AT4G12080.1 AT-hook motif nuclear-localized protein 1; Swiss-Prot: sp|Q8VYJ2|AHL1_ARATH AT-hook motif nuclear-localized protein 1; TrEMBL-Plants: tr|A0A068VB24|A0A068VB24_COFCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0427700
Domains
9
LotjaGi2g1v0427700.2
– AT hook, DNA-binding motif-containing protein; TAIR: AT4G12080.1 AT-hook motif nuclear-localized protein 1; Swiss-Prot: sp|Q8VYJ2|AHL1_ARATH AT-hook motif nuclear-localized protein 1; TrEMBL-Plants: tr|A0A068VB24|A0A068VB24_COFCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0427700
Domains
9
LotjaGi2g1v0433700.1
– AT hook motif DNA-binding family protein; TAIR: AT1G63470.1 AT hook motif DNA-binding family protein; Swiss-Prot: sp|Q8GXB3|AHL5_ARATH AT-hook motif nuclear-localized protein 5; TrEMBL-Plants: tr|I1LGG0|I1LGG0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0433700
Domains
10
LotjaGi3g1v0123600_LC.1
– AT hook motif DNA-binding family protein; TAIR: AT2G33620.1 AT hook motif DNA-binding family protein; Swiss-Prot: sp|O22812|AHL10_ARATH AT-hook motif nuclear-localized protein 10; TrEMBL-Plants: tr|A0A0S3SCI8|A0A0S3SCI8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0123600_LC
Domains
7
LotjaGi3g1v0382100.1
– AT hook motif DNA-binding family protein; TAIR: AT2G45850.1 AT hook motif DNA-binding family protein; Swiss-Prot: sp|O80834|AHL9_ARATH AT-hook motif nuclear-localized protein 9; TrEMBL-Plants: tr|A0A0S3SYX0|A0A0S3SYX0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0382100
Domains
16
LotjaGi3g1v0382200.1
– AT hook motif DNA-binding family protein; TAIR: AT2G45850.1 AT hook motif DNA-binding family protein; Swiss-Prot: sp|O80834|AHL9_ARATH AT-hook motif nuclear-localized protein 9; TrEMBL-Plants: tr|V7AN95|V7AN95_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0382200
Domains
16
LotjaGi3g1v0387200_LC.1
– AT hook motif DNA-binding family protein; TAIR: AT2G33620.1 AT hook motif DNA-binding family protein; Swiss-Prot: sp|O22812|AHL10_ARATH AT-hook motif nuclear-localized protein 10; TrEMBL-Plants: tr|A0A072UVM8|A0A072UVM8_MEDTR AT hook motif DNA-binding family protein; Found in the gene: LotjaGi3g1v0387200_LC
Domains
10
LotjaGi3g1v0432800.1
– AT hook motif DNA-binding family protein; TAIR: AT4G12080.1 AT-hook motif nuclear-localized protein 1; Swiss-Prot: sp|Q8VYJ2|AHL1_ARATH AT-hook motif nuclear-localized protein 1; TrEMBL-Plants: tr|I1JKL2|I1JKL2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0432800
Domains
10
LotjaGi3g1v0432800.2
– AT hook motif DNA-binding family protein; TAIR: AT4G12080.1 AT-hook motif nuclear-localized protein 1; Swiss-Prot: sp|Q8VYJ2|AHL1_ARATH AT-hook motif nuclear-localized protein 1; TrEMBL-Plants: tr|I1JKL2|I1JKL2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0432800
Domains
10
LotjaGi3g1v0432800.3
– AT hook motif DNA-binding family protein; TAIR: AT4G12080.1 AT-hook motif nuclear-localized protein 1; Swiss-Prot: sp|Q8VYJ2|AHL1_ARATH AT-hook motif nuclear-localized protein 1; TrEMBL-Plants: tr|I1JKL2|I1JKL2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0432800
Domains
10
LotjaGi3g1v0481300.1
– AT hook motif DNA-binding family protein; TAIR: AT2G45850.1 AT hook motif DNA-binding family protein; Swiss-Prot: sp|O80834|AHL9_ARATH AT-hook motif nuclear-localized protein 9; TrEMBL-Plants: tr|A0A0S3SCI8|A0A0S3SCI8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0481300
Domains
13
LotjaGi4g1v0188300.1
– AT hook motif DNA-binding family protein; TAIR: AT4G17950.1 AT hook motif DNA-binding family protein; Swiss-Prot: sp|Q940I0|AHL13_ARATH AT-hook motif nuclear-localized protein 13; TrEMBL-Plants: tr|V7CEI0|V7CEI0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0188300
Domains
12
LotjaGi4g1v0212200.1
– AT hook motif DNA-binding family protein; TAIR: AT4G12080.1 AT-hook motif nuclear-localized protein 1; Swiss-Prot: sp|Q8VYJ2|AHL1_ARATH AT-hook motif nuclear-localized protein 1; TrEMBL-Plants: tr|I1K0I8|I1K0I8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0212200
Domains
10
LotjaGi4g1v0425400.1
– AT hook motif DNA-binding family protein; TAIR: AT1G63470.1 AT hook motif DNA-binding family protein; Swiss-Prot: sp|Q8GXB3|AHL5_ARATH AT-hook motif nuclear-localized protein 5; TrEMBL-Plants: tr|O04696|O04696_PEA AT-hook motif nuclear localized protein 1; Found in the gene: LotjaGi4g1v0425400
Domains
12
LotjaGi5g1v0090500.1
– AT hook motif DNA-binding family protein; TAIR: AT4G12080.1 AT-hook motif nuclear-localized protein 1; Swiss-Prot: sp|Q8VYJ2|AHL1_ARATH AT-hook motif nuclear-localized protein 1; TrEMBL-Plants: tr|I3SDN1|I3SDN1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0090500
Domains
9
LotjaGi5g1v0090500.2
– AT hook motif DNA-binding family protein; TAIR: AT4G12080.1 AT-hook motif nuclear-localized protein 1; Swiss-Prot: sp|Q8VYJ2|AHL1_ARATH AT-hook motif nuclear-localized protein 1; TrEMBL-Plants: tr|I3SDN1|I3SDN1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0090500
Domains
10
LotjaGi5g1v0194500.1
– AT hook motif DNA-binding family protein; TAIR: AT5G62260.1 AT hook motif DNA-binding family protein; Swiss-Prot: sp|Q9LVB0|AHL6_ARATH AT-hook motif nuclear-localized protein 6; TrEMBL-Plants: tr|A0A151U5L7|A0A151U5L7_CAJCA Putative DNA-binding protein ESCAROLA; Found in the gene: LotjaGi5g1v0194500
Domains
12
LotjaGi5g1v0206200.1
– AT hook motif DNA-binding family protein; TAIR: AT3G04590.2 AT hook motif DNA-binding family protein; Swiss-Prot: sp|A1L4X7|AHL14_ARATH AT-hook motif nuclear-localized protein 14; TrEMBL-Plants: tr|A0A151TXP1|A0A151TXP1_CAJCA Putative DNA-binding protein ESCAROLA; Found in the gene: LotjaGi5g1v0206200
Domains
10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 4.17