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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001611
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 861 results. Now displaying 7 of 18 with 50 rows per page. This search has taken 5.445s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v1438580.1
n.a. PREDICTED: leucine-rich repeat protein soc-2 homolog isoform X1 [Cicer arietinum] gi|502176452|ref|XP_004515868.1| chr4 22246752 22249652 -
3 domain predictions
1 GO term
Lj4g3v1463040.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g26540-like [Glycine max] gi|356562708|ref|XP_003549611.1| chr4 22517029 22522025 +
3 domain predictions
1 GO term
Lj4g3v1463050.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g26540-like [Glycine max] gi|356562708|ref|XP_003549611.1| chr4 22517095 22522701 +
3 domain predictions
1 GO term
Lj4g3v1474100.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1-like [Glycine max] gi|356513621|ref|XP_003525510.1| chr4 22554084 22558417 +
5 domain predictions
1 GO term
Lj4g3v1474100.2
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1-like [Glycine max] gi|356513621|ref|XP_003525510.1| chr4 22554106 22558417 +
5 domain predictions
1 GO term
Lj4g3v1474110.1
n.a. n.a. chr4 22554275 22559088 -
4 domain predictions
1 GO term
Lj4g3v1535150.1
n.a. PREDICTED: probable inactive receptor kinase At2g26730-like [Glycine max] gi|356518991|ref|XP_003528158.1| chr4 23044744 23047712 -
2 domain predictions
1 GO term
Lj4g3v1683150.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g74360-like [Cicer arietinum] gi|502151983|ref|XP_004508707.1| chr4 24372558 24376499 +
4 domain predictions
1 GO term
Lj4g3v1802320.1
n.a. PREDICTED: probable inactive receptor kinase At2g26730-like [Cicer arietinum] gi|502151673|ref|XP_004508557.1| chr4 25494010 25497836 +
2 domain predictions
1 GO term
Lj4g3v1880660.1
n.a. PREDICTED: EIN3-binding F-box protein 1-like [Glycine max] gi|356548573|ref|XP_003542675.1| chr4 26092553 26095968 +
2 domain predictions
1 GO term
Lj4g3v1947730.1
n.a. F-box/LRR-repeat protein [Medicago truncatula] gi|357478391|ref|XP_003609481.1| chr4 27266156 27274106 +
3 domain predictions
1 GO term
Lj4g3v1947730.2
n.a. PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max] gi|356548547|ref|XP_003542662.1| chr4 27266156 27276269 +
3 domain predictions
1 GO term
Lj4g3v1983460.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230-like [Glycine max] gi|356562577|ref|XP_003549546.1| chr4 27587854 27591888 +
4 domain predictions
1 GO term
Lj4g3v2018260.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g23950-like [Glycine max] gi|356498787|ref|XP_003518230.1| chr4 27962193 27966683 +
3 domain predictions
1 GO term
Lj4g3v2139650.1
n.a. leucine rich repeat protein [Lotus japonicus] gi|283132365|dbj|BAI63588.1| chr4 29507938 29512560 +
2 domain predictions
1 GO term
Lj4g3v2401000.1
n.a. PREDICTED: serine/threonine-protein kinase BRI1-like 2-like [Glycine max] gi|356528178|ref|XP_003532682.1| chr4 33284305 33288606 +
3 domain predictions
1 GO term
Lj4g3v2468410.1
n.a. PREDICTED: piriformospora indica-insensitive protein 2-like [Glycine max] gi|356528210|ref|XP_003532698.1| chr4 33748184 33749491 +
3 domain predictions
1 GO term
Lj4g3v2578250.1
n.a. Rhg4-like receptor kinase II [Glycine max] gi|90655934|gb|ABD96566.1| chr4 34603303 34607390 +
3 domain predictions
1 GO term
Lj4g3v2604790.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230-like [Glycine max] gi|356510976|ref|XP_003524208.1| chr4 35375811 35378844 +
3 domain predictions
1 GO term
Lj4g3v2605850.1
n.a. PREDICTED: receptor-like protein kinase 5-like [Cicer arietinum] gi|502140655|ref|XP_004504290.1| chr4 35418829 35420389 -
2 domain predictions
1 GO term
Lj4g3v2605860.1
n.a. n.a. chr4 35419217 35433581 +
3 domain predictions
1 GO term
Lj4g3v2645210.1
n.a. Uncharacterized protein TCM_006100 [Theobroma cacao] gi|508705085|gb|EOX96981.1| chr4 36020340 36024651 +
2 domain predictions
1 GO term
Lj4g3v2717100.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357469043|ref|XP_003604806.1| chr4 36579843 36580903 +
3 domain predictions
1 GO term
Lj4g3v2717110.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357519395|ref|XP_003629986.1| chr4 36581055 36582094 +
3 domain predictions
1 GO term
Lj4g3v2824380.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290-like [Glycine max] gi|356512695|ref|XP_003525052.1| chr4 37785573 37791823 -
2 domain predictions
1 GO term
Lj4g3v2846230.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g63710-like [Glycine max] gi|356527105|ref|XP_003532154.1| chr4 38073708 38079085 -
2 domain predictions
1 GO term
Lj4g3v2951110.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like isoform X1 [Cicer arietinum] gi|502139432|ref|XP_004503764.1| chr4 39039562 39043611 +
2 domain predictions
1 GO term
Lj4g3v2951110.3
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like isoform X1 [Cicer arietinum] gi|502139432|ref|XP_004503764.1| chr4 39039562 39043051 +
2 domain predictions
1 GO term
Lj4g3v3002540.1
n.a. PREDICTED: probable inactive receptor kinase At4g23740-like [Glycine max] gi|356528976|ref|XP_003533073.1| chr4 39694982 39698811 +
2 domain predictions
1 GO term
Lj4g3v3003880.1
n.a. PREDICTED: toll-like receptor 13-like isoform X2 [Cicer arietinum] gi|502139050|ref|XP_004503628.1| chr4 39818294 39822617 +
2 domain predictions
1 GO term
Lj4g3v3042720.1
n.a. PREDICTED: leucine-rich repeat extensin-like protein 6-like [Glycine max] gi|356513183|ref|XP_003525293.1| chr4 40619933 40621932 +
2 domain predictions
1 GO term
Lj4g3v3093870.1
n.a. PREDICTED: leucine-rich repeat extensin-like protein 3-like [Cicer arietinum] gi|502163490|ref|XP_004512856.1| chr4 40995121 40998101 +
2 domain predictions
1 GO term
Lj4g3v3115120.1
n.a. leucine-rich repeat family protein [Arabidopsis lyrata subsp]. lyrata] gi|297847122|ref|XP_002891442.1| chr4 42222257 42229565 +
3 domain predictions
1 GO term
Lj5g3v0104760.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g16250-like [Cicer arietinum] gi|502126040|ref|XP_004499157.1| chr5 838894 843879 -
2 domain predictions
1 GO term
Lj5g3v0104760.3
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g16250-like [Cicer arietinum] gi|502126040|ref|XP_004499157.1| chr5 839866 843879 -
2 domain predictions
1 GO term
Lj5g3v0196810.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RLK-like [Glycine max] gi|356511425|ref|XP_003524427.1| chr5 1694570 1698020 +
2 domain predictions
1 GO term
Lj5g3v0294900.1
n.a. n.a. chr5 2645191 2648901 +
2 domain predictions
1 GO term
Lj5g3v0539600.1
n.a. PREDICTED: EIN3-binding F-box protein 1-like [Cicer arietinum] gi|502124962|ref|XP_004498740.1| chr5 6233716 6234353 -
2 domain predictions
1 GO term
Lj5g3v0747050.1
n.a. PREDICTED: F-box protein At3g58530-like [Glycine max] gi|356530677|ref|XP_003533907.1| chr5 10912576 10923513 -
2 domain predictions
1 GO term
Lj5g3v0875650.1
n.a. NBS-LRR resistance-like protein 4G [Medicago truncatula] gi|357515077|ref|XP_003627827.1| chr5 12748785 12757034 +
2 domain predictions
1 GO term
Lj5g3v0975920.1
n.a. PREDICTED: RAN GTPase-activating protein 1-like [Glycine max] gi|356500208|ref|XP_003518925.1| chr5 15215592 15217855 -
2 domain predictions
1 GO term
Lj5g3v1118340.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At2g25790-like [Cicer arietinum] gi|502115750|ref|XP_004495283.1| chr5 17827770 17829721 +
2 domain predictions
1 GO term
Lj5g3v1303360.1
n.a. Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|357441259|ref|XP_003590907.1| chr5 20341305 20355738 -
2 domain predictions
1 GO term
Lj5g3v1692560.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase ERL1-like [Cicer arietinum] gi|502118010|ref|XP_004496056.1| chr5 23963833 23966980 -
3 domain predictions
1 GO term
Lj5g3v1749280.1
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At5g20690-like [Cicer arietinum] gi|502150559|ref|XP_004508012.1| chr5 25032139 25035580 -
2 domain predictions
1 GO term
Lj5g3v1749340.3
n.a. PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform 1 [Glycine max] gi|356558614|ref|XP_003547599.1| chr5 25053929 25060627 -
3 domain predictions
1 GO term
Lj5g3v1791270.1
n.a. PREDICTED: piriformospora indica-insensitive protein 2-like [Glycine max] gi|356576273|ref|XP_003556257.1| chr5 25400707 25403399 +
2 domain predictions
1 GO term
Lj5g3v1853270.1
n.a. PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820-like [Cicer arietinum] gi|502118661|ref|XP_004496359.1| chr5 26495178 26498927 -
3 domain predictions
1 GO term
Lj5g3v1902660.1
n.a. leucine-rich repeat transmembrane protein kinase [Glycine max] gi|223452532|gb|ACM89593.1| chr5 27029902 27034582 -
3 domain predictions
1 GO term
Lj5g3v1958040.1
n.a. PREDICTED: leucine-rich repeat receptor-like protein kinase TDR-like [Glycine max] gi|356542427|ref|XP_003539668.1| chr5 27683430 27684690 +
3 domain predictions
1 GO term