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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR019734
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We have found 350 results. Now displaying 7 of 7 with 50 rows per page. This search has taken 5.438s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. Protein SLOW GREEN 1, chloroplastic; TAIR: AT2G37400.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9LS48|SG1_ARATH protein SLOW GREEN 1, chloroplastic; TrEMBL-Plants: tr|A0A1J7IS44|A0A1J7IS44_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0070500 LjG1.1_chr5 11634393 11637330 +
n.a. Photosystem I assembly protein Ycf3; TAIR: AT3G11540.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|O82039|SPY_PETHY Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; TrEMBL-Plants: tr|A0A151U3N8|A0A151U3N8_CAJCA Putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; Found in the gene: LotjaGi5g1v0099700 LjG1.1_chr5 17927029 17946679 +
n.a. Photosystem I assembly protein Ycf3; TAIR: AT3G11540.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|O82039|SPY_PETHY Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; TrEMBL-Plants: tr|A0A151U3N8|A0A151U3N8_CAJCA Putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; Found in the gene: LotjaGi5g1v0099700 LjG1.1_chr5 17927738 17943832 +
n.a. Photosystem I assembly protein Ycf3; TAIR: AT3G11540.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|O82039|SPY_PETHY Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; TrEMBL-Plants: tr|A0A151U3N8|A0A151U3N8_CAJCA Putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; Found in the gene: LotjaGi5g1v0099700 LjG1.1_chr5 17927885 17945814 +
n.a. Tetratricopeptide repeat-containing family protein; TAIR: AT1G04130.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q54M20|TTC4_DICDI Tetratricopeptide repeat protein 4 homolog; TrEMBL-Plants: tr|A0A0R0GVX7|A0A0R0GVX7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0152200 LjG1.1_chr5 39774941 39781456 -
n.a. Tetratricopeptide repeat protein 7A; TAIR: AT4G28600.1 no pollen germination related 2; Swiss-Prot: sp|Q66GN3|NPGR2_ARATH Protein NPGR2; TrEMBL-Plants: tr|I1L8G5|I1L8G5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0154400 LjG1.1_chr5 40107055 40111868 -
n.a. Tetratricopeptide repeat (TPR)-like superfamily protein; TAIR: AT1G04530.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q54NS3|Y5095_DICDI TPR repeat-containing protein DDB_G0285095; TrEMBL-Plants: tr|A0A151T122|A0A151T122_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0160600 LjG1.1_chr5 41089279 41098194 -
n.a. Ethylene-overproduction protein 1; TAIR: AT4G02680.1 ETO1-like 1; Swiss-Prot: sp|Q9ZQX6|ETOL1_ARATH ETO1-like protein 1; TrEMBL-Plants: tr|A0A151S1C1|A0A151S1C1_CAJCA ETO1-like protein 1; Found in the gene: LotjaGi5g1v0171200 LjG1.1_chr5 43976682 43982031 +
n.a. Ethylene-overproduction protein 1; TAIR: AT4G02680.1 ETO1-like 1; Swiss-Prot: sp|Q9ZQX6|ETOL1_ARATH ETO1-like protein 1; TrEMBL-Plants: tr|A0A151S1C1|A0A151S1C1_CAJCA ETO1-like protein 1; Found in the gene: LotjaGi5g1v0171200 LjG1.1_chr5 43976701 43982511 +
n.a. Ethylene-overproduction protein 1; TAIR: AT4G02680.1 ETO1-like 1; Swiss-Prot: sp|Q9ZQX6|ETOL1_ARATH ETO1-like protein 1; TrEMBL-Plants: tr|A0A151S1C1|A0A151S1C1_CAJCA ETO1-like protein 1; Found in the gene: LotjaGi5g1v0171200 LjG1.1_chr5 43977575 43981569 +
n.a. Protein KINESIN LIGHT CHAIN-RELATED 3; TAIR: AT2G31240.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|O81629|KLCR1_ARATH Protein KINESIN LIGHT CHAIN-RELATED 1; TrEMBL-Plants: tr|A0A1J7GMN0|A0A1J7GMN0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0179900 LjG1.1_chr5 45755524 45762365 +
n.a. Tetratricopeptide repeat protein; TAIR: AT4G28600.1 no pollen germination related 2; Swiss-Prot: sp|Q66GN3|NPGR2_ARATH Protein NPGR2; TrEMBL-Plants: tr|K7LK68|K7LK68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0187600 LjG1.1_chr5 47561591 47566240 -
n.a. Tetratricopeptide repeat (TPR)-like superfamily protein; TAIR: AT3G04240.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9M8Y0|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; TrEMBL-Plants: tr|G7I5N5|G7I5N5_MEDTR Peptide-N-acetylglucosaminyltransferase; Found in the gene: LotjaGi5g1v0205100 LjG1.1_chr5 50717525 50727076 -
n.a. tetratricopeptide repeat (TPR)-containing protein; TAIR: AT3G04240.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9M8Y0|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; TrEMBL-Plants: tr|G7I5N5|G7I5N5_MEDTR Peptide-N-acetylglucosaminyltransferase; Found in the gene: LotjaGi5g1v0205100 LjG1.1_chr5 50717834 50723575 -
n.a. Tetratricopeptide repeat (TPR)-like superfamily protein; TAIR: AT3G04240.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9M8Y0|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; TrEMBL-Plants: tr|G7I5N5|G7I5N5_MEDTR Peptide-N-acetylglucosaminyltransferase; Found in the gene: LotjaGi5g1v0205100 LjG1.1_chr5 50717834 50726534 -
n.a. Tetratricopeptide repeat (TPR)-like superfamily protein; TAIR: AT3G04240.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9M8Y0|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; TrEMBL-Plants: tr|G7I5N5|G7I5N5_MEDTR Peptide-N-acetylglucosaminyltransferase; Found in the gene: LotjaGi5g1v0205100 LjG1.1_chr5 50717834 50726534 -
n.a. Tetratricopeptide repeat (TPR)-like superfamily protein; TAIR: AT3G04240.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9M8Y0|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; TrEMBL-Plants: tr|G7I5N5|G7I5N5_MEDTR Peptide-N-acetylglucosaminyltransferase; Found in the gene: LotjaGi5g1v0205100 LjG1.1_chr5 50717834 50726534 -
n.a. TPR repeat; TAIR: AT3G05625.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q1C3L9|NLPI_YERPA Lipoprotein NlpI; TrEMBL-Plants: tr|I3SUQ3|I3SUQ3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0226800 LjG1.1_chr5 53395163 53403510 -
n.a. TPR repeat protein; TAIR: AT3G05625.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q1C3L9|NLPI_YERPA Lipoprotein NlpI; TrEMBL-Plants: tr|I3SUQ3|I3SUQ3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0226800 LjG1.1_chr5 53395176 53403697 -
n.a. RNA polymerase II-associated protein 3; TAIR: AT1G56440.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q68FQ7|RPAP3_RAT RNA polymerase II-associated protein 3; TrEMBL-Plants: tr|I1LB41|I1LB41_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0230400 LjG1.1_chr5 53777909 53785465 -
n.a. DnaJ; TAIR: AT4G02100.1 Heat shock protein DnaJ with tetratricopeptide repeat-containing protein; Swiss-Prot: sp|Q54IP0|DNJC7_DICDI DnaJ homolog subfamily C member 7 homolog; TrEMBL-Plants: tr|G7IDS2|G7IDS2_MEDTR DNAJ heat shock amino-terminal domain protein; Found in the gene: LotjaGi5g1v0246100 LjG1.1_chr5 55459032 55462352 +
n.a. Tetratricopeptide repeat protein, tpr, putative; TAIR: AT1G22700.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|O78458|YCF37_GUITH Uncharacterized protein ycf37; TrEMBL-Plants: tr|I3SQZ7|I3SQZ7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0278900 LjG1.1_chr5 59426858 59431679 -
n.a. Tetratricopeptide repeat protein 5; TAIR: AT3G04240.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q8N0Z6|TTC5_HUMAN Tetratricopeptide repeat protein 5; TrEMBL-Plants: tr|I1LEN6|I1LEN6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0332200 LjG1.1_chr5 64918878 64926876 +
n.a. Tetratricopeptide repeat-containing family protein; TAIR: AT1G04190.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q5XEP2|HSOP2_ARATH Hsp70-Hsp90 organizing protein 2; TrEMBL-Plants: tr|A0A151U2M8|A0A151U2M8_CAJCA Heat shock protein STI; Found in the gene: LotjaGi6g1v0002900 LjG1.1_chr6 651775 661206 -
n.a. Tetratricopeptide repeat-containing family protein; TAIR: AT1G04190.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q5XEP2|HSOP2_ARATH Hsp70-Hsp90 organizing protein 2; TrEMBL-Plants: tr|A0A151U2M8|A0A151U2M8_CAJCA Heat shock protein STI; Found in the gene: LotjaGi6g1v0002900 LjG1.1_chr6 652986 661046 -
n.a. Tetratricopeptide repeat-containing family protein; TAIR: AT1G04190.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q5XEP2|HSOP2_ARATH Hsp70-Hsp90 organizing protein 2; TrEMBL-Plants: tr|A0A151U2M8|A0A151U2M8_CAJCA Heat shock protein STI; Found in the gene: LotjaGi6g1v0002900 LjG1.1_chr6 653210 661049 -
n.a. Calcium-binding EF hand protein; TAIR: AT1G05150.1 Calcium-binding tetratricopeptide family protein; Swiss-Prot: sp|O23052|Y1515_ARATH Uncharacterized TPR repeat-containing protein At1g05150; TrEMBL-Plants: tr|K7LJ63|K7LJ63_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0008900 LjG1.1_chr6 1718541 1723006 +
n.a. Calcium-binding EF hand protein; TAIR: AT1G05150.1 Calcium-binding tetratricopeptide family protein; Swiss-Prot: sp|O23052|Y1515_ARATH Uncharacterized TPR repeat-containing protein At1g05150; TrEMBL-Plants: tr|K7LJ63|K7LJ63_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0008900 LjG1.1_chr6 1718999 1721424 +
n.a. Kinesin light chain 3; TAIR: AT5G37590.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9NSK0|KLC4_HUMAN Kinesin light chain 4; TrEMBL-Plants: tr|K7MPT4|K7MPT4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0055200 LjG1.1_chr6 9940938 9964101 -
n.a. Tetratricopeptide repeat-containing protein; TAIR: AT4G08320.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|P0CT30|SGT2_USTMA Small glutamine-rich tetratricopeptide repeat-containing protein 2; TrEMBL-Plants: tr|A0A068UQS9|A0A068UQS9_COFCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0077100_LC LjG1.1_chr6 14603359 14609452 +
n.a. Alpha-soluble NSF attachment protein; TAIR: AT3G56190.1 alpha-soluble NSF attachment protein 2; Swiss-Prot: sp|P93798|SNAA_VITVI Alpha-soluble NSF attachment protein; TrEMBL-Plants: tr|I3T1G7|I3T1G7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0082300 LjG1.1_chr6 15880841 15886191 -
n.a. Alpha-soluble NSF attachment protein; TAIR: AT3G56190.1 alpha-soluble NSF attachment protein 2; Swiss-Prot: sp|P93798|SNAA_VITVI Alpha-soluble NSF attachment protein; TrEMBL-Plants: tr|I3T1G7|I3T1G7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0082300 LjG1.1_chr6 15881454 15885891 -
n.a. Trafficking protein particle complex subunit 12; TAIR: AT4G39820.2 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q8K2L8|TPC12_MOUSE Trafficking protein particle complex subunit 12; TrEMBL-Plants: tr|G7J4D2|G7J4D2_MEDTR Trafficking protein particle complex subunit-like protein; Found in the gene: LotjaGi6g1v0085400 LjG1.1_chr6 16987037 16991182 +
n.a. TPR repeat-containing thioredoxin TTL1-like protein; TAIR: AT5G65160.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q9SIN1|TTL3_ARATH Inactive TPR repeat-containing thioredoxin TTL3; TrEMBL-Plants: tr|G7J3U4|G7J3U4_MEDTR Inactive TPR repeat thioredoxin TTL3-like protein; Found in the gene: LotjaGi6g1v0086600 LjG1.1_chr6 17454803 17458697 -
n.a. N-alpha-acetyltransferase 25, NatB auxiliary subunit; TAIR: AT5G58450.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9VDQ7|NAA25_DROME Phagocyte signaling-impaired protein; TrEMBL-Plants: tr|K7LR08|K7LR08_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0108500 LjG1.1_chr6 24668163 24684023 -
n.a. Ethylene-overproduction protein 1; TAIR: AT3G51770.2 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|O65020|ETO1_ARATH Ethylene-overproduction protein 1; TrEMBL-Plants: tr|K7MQ77|K7MQ77_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0126300 LjG1.1_chr6 32652755 32665438 +
n.a. Serine/threonine-protein phosphatase; TAIR: AT2G42810.1 protein phosphatase 5.2; Swiss-Prot: sp|Q84K11|PPP5_SOLLC Serine/threonine-protein phosphatase 5; TrEMBL-Plants: tr|I1KY36|I1KY36_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0170500 LjG1.1_chr6 45713164 45722095 +
n.a. Serine/threonine-protein phosphatase; TAIR: AT2G42810.1 protein phosphatase 5.2; Swiss-Prot: sp|Q84K11|PPP5_SOLLC Serine/threonine-protein phosphatase 5; TrEMBL-Plants: tr|I1KY36|I1KY36_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0170500 LjG1.1_chr6 45714190 45721330 +
n.a. Serine/threonine-protein phosphatase; TAIR: AT2G42810.2 protein phosphatase 5.2; Swiss-Prot: sp|Q84K11|PPP5_SOLLC Serine/threonine-protein phosphatase 5; TrEMBL-Plants: tr|A0A0B2NRB4|A0A0B2NRB4_GLYSO Serine/threonine-protein phosphatase 5; Found in the gene: LotjaGi6g1v0170500 LjG1.1_chr6 45714190 45721330 +
n.a. Serine/threonine-protein phosphatase; TAIR: AT2G42810.1 protein phosphatase 5.2; Swiss-Prot: sp|Q84K11|PPP5_SOLLC Serine/threonine-protein phosphatase 5; TrEMBL-Plants: tr|I1KY36|I1KY36_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0170500 LjG1.1_chr6 45714190 45721330 +
n.a. Clustered mitochondria protein; TAIR: AT4G28080.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|F4JKH6|TSS_ARATH Protein TSS; TrEMBL-Plants: tr|A0A0B2P2Z7|A0A0B2P2Z7_GLYSO Protein KIAA0664-like protein; Found in the gene: LotjaGi6g1v0199800 LjG1.1_chr6 49636224 49652999 -
n.a. Clustered mitochondria protein; TAIR: AT4G28080.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|F4JKH6|TSS_ARATH Protein TSS; TrEMBL-Plants: tr|A0A0B2P2Z7|A0A0B2P2Z7_GLYSO Protein KIAA0664-like protein; Found in the gene: LotjaGi6g1v0199800 LjG1.1_chr6 49636224 49656084 -
n.a. Clustered mitochondria protein; TAIR: AT4G28080.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|F4JKH6|TSS_ARATH Protein TSS; TrEMBL-Plants: tr|A0A0B2P2Z7|A0A0B2P2Z7_GLYSO Protein KIAA0664-like protein; Found in the gene: LotjaGi6g1v0199800 LjG1.1_chr6 49636253 49655960 -
n.a. Clustered mitochondria protein; TAIR: AT4G28080.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|F4JKH6|TSS_ARATH Protein TSS; TrEMBL-Plants: tr|I1JWD6|I1JWD6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0199800 LjG1.1_chr6 49636988 49655244 -
n.a. Octicosapeptide/Phox/Bem1p domain-containing protein / tetratricopeptide repeat-containing protein; TAIR: AT2G25290.1 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|K7TQE3|HIP_MAIZE HSP-interacting protein; TrEMBL-Plants: tr|I1L282|I1L282_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0210000 LjG1.1_chr6 50753176 50758280 +
n.a. RNA polymerase-associated protein CTR9 like; TAIR: AT2G06210.1 binding protein; Swiss-Prot: sp|B5X0I6|VIP6_ARATH Protein CTR9 homolog; TrEMBL-Plants: tr|I1MHE8|I1MHE8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0225800 LjG1.1_chr6 53155381 53168411 -
n.a. RNA polymerase-associated protein CTR9 like; TAIR: AT2G06210.1 binding protein; Swiss-Prot: sp|B5X0I6|VIP6_ARATH Protein CTR9 homolog; TrEMBL-Plants: tr|A0A151QVK3|A0A151QVK3_CAJCA RNA polymerase-associated protein CTR9 isogeny; Found in the gene: LotjaGi6g1v0225800 LjG1.1_chr6 53156489 53168113 -
n.a. Tetratricopeptide repeat (TPR)-like superfamily protein; TAIR: AT4G20900.2 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9SUC3|MS5_ARATH Protein POLLENLESS 3; TrEMBL-Plants: tr|A0A151SB89|A0A151SB89_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0269500 LjG1.1_chr6 58399560 58403230 -
n.a. Anaphase-promoting complex subunit 7; TAIR: AT2G39090.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q8VY89|APC7_ARATH Anaphase-promoting complex subunit 7; TrEMBL-Plants: tr|A0A0L9VER9|A0A0L9VER9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0307100 LjG1.1_chr6 62426945 62434868 -
n.a. Glutamyl-tRNA(Gln) amidotransferase subunit A; TAIR: AT5G09420.1 translocon at the outer membrane of chloroplasts 64-V; Swiss-Prot: sp|F4KCL7|OE64M_ARATH Outer envelope protein 64, mitochondrial; TrEMBL-Plants: tr|I1KUC8|I1KUC8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0352400 LjG1.1_chr6 66448544 66454373 -