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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR032675
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We have found 2134 results. Now displaying 35 of 43 with 50 rows per page. This search has taken 5.890s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. F-box/LRR-repeat protein; TAIR: AT1G15740.1 Leucine-rich repeat family protein; Swiss-Prot: sp|A2RT62|FXL16_MOUSE F-box/LRR-repeat protein 16; TrEMBL-Plants: tr|I1KGY2|I1KGY2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0353800 LjG1.1_chr3 73485681 73495542 -
n.a. Receptor-like kinase; TAIR: AT5G48380.1 BAK1-interacting receptor-like kinase 1; Swiss-Prot: sp|Q9ASS4|Y5838_ARATH Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380; TrEMBL-Plants: tr|A0A072TLE6|A0A072TLE6_MEDTR LRR receptor-like kinase; Found in the gene: LotjaGi3g1v0370100 LjG1.1_chr3 75736360 75739988 +
n.a. Receptor-like kinase; TAIR: AT5G48380.1 BAK1-interacting receptor-like kinase 1; Swiss-Prot: sp|Q9ASS4|Y5838_ARATH Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380; TrEMBL-Plants: tr|A0A072TLE6|A0A072TLE6_MEDTR LRR receptor-like kinase; Found in the gene: LotjaGi3g1v0370100 LjG1.1_chr3 75737101 75739599 +
n.a. Receptor-like kinase; TAIR: AT5G48380.1 BAK1-interacting receptor-like kinase 1; Swiss-Prot: sp|Q9ASS4|Y5838_ARATH Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380; TrEMBL-Plants: tr|A0A072TLE6|A0A072TLE6_MEDTR LRR receptor-like kinase; Found in the gene: LotjaGi3g1v0370100 LjG1.1_chr3 75737125 75739599 +
n.a. Receptor-like protein kinase; TAIR: AT1G51800.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|O65924|Y2921_ARATH Putative leucine-rich repeat receptor-like protein kinase At2g19210; TrEMBL-Plants: tr|A0A0R0IUZ9|A0A0R0IUZ9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0373700 LjG1.1_chr3 76582487 76587628 +
n.a. Receptor-like protein kinase; TAIR: AT1G51800.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|O65924|Y2921_ARATH Putative leucine-rich repeat receptor-like protein kinase At2g19210; TrEMBL-Plants: tr|A0A0R0IUZ9|A0A0R0IUZ9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0373800 LjG1.1_chr3 76598386 76610056 +
n.a. F-box/LRR protein; TAIR: AT1G80630.1 RNI-like superfamily protein; Swiss-Prot: sp|Q9CZV8|FXL20_MOUSE F-box/LRR-repeat protein 20; TrEMBL-Plants: tr|I1KGW4|I1KGW4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0376200 LjG1.1_chr3 76890719 76896271 +
n.a. F-box/LRR protein; TAIR: AT1G80630.1 RNI-like superfamily protein; Swiss-Prot: sp|Q9CZV8|FXL20_MOUSE F-box/LRR-repeat protein 20; TrEMBL-Plants: tr|I1KGW4|I1KGW4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0376200 LjG1.1_chr3 76890900 76896266 +
n.a. Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A151UCT9|A0A151UCT9_CAJCA TMV resistance protein N; Found in the gene: LotjaGi3g1v0385700 LjG1.1_chr3 78104880 78111356 +
n.a. Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A151UCT9|A0A151UCT9_CAJCA TMV resistance protein N; Found in the gene: LotjaGi3g1v0385700 LjG1.1_chr3 78105322 78111871 +
n.a. Receptor protein kinase, putative; TAIR: AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein; Swiss-Prot: sp|Q8VZG8|MIK2_ARATH MDIS1-interacting receptor like kinase 2; TrEMBL-Plants: tr|A0A0B2RKE3|A0A0B2RKE3_GLYSO Putative LRR receptor-like serine/threonine-protein kinase; Found in the gene: LotjaGi3g1v0395600 LjG1.1_chr3 79554841 79558399 +
n.a. Receptor kinase; TAIR: AT1G72300.1 Leucine-rich receptor-like protein kinase family protein; Swiss-Prot: sp|Q9C7S5|PSYR1_ARATH Tyrosine-sulfated glycopeptide receptor 1; TrEMBL-Plants: tr|C6ZRX1|C6ZRX1_SOYBN Leucine-rich repeat receptor-like kinase; Found in the gene: LotjaGi3g1v0406300 LjG1.1_chr3 80962792 80967377 +
n.a. Receptor-like protein kinase; TAIR: AT1G53730.1 STRUBBELIG-receptor family 6; Swiss-Prot: sp|Q9C8M9|SRF6_ARATH Protein STRUBBELIG-RECEPTOR FAMILY 6; TrEMBL-Plants: tr|G7L9Y0|G7L9Y0_MEDTR Strubbelig-receptor family 6 protein; Found in the gene: LotjaGi3g1v0406500 LjG1.1_chr3 80986659 80996457 +
n.a. Receptor-like kinase, putative; TAIR: AT3G42880.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9M1L7|PRK3_ARATH Pollen receptor-like kinase 3; TrEMBL-Plants: tr|A0A1J7HL78|A0A1J7HL78_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0412000 LjG1.1_chr3 81614640 81618436 +
n.a. CC-NBS-LRR disease resistance protein; TAIR: AT3G07040.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q39214|RPM1_ARATH Disease resistance protein RPM1; TrEMBL-Plants: tr|G7L7I1|G7L7I1_MEDTR NB-ARC domain disease resistance protein, putative; Found in the gene: LotjaGi3g1v0414500 LjG1.1_chr3 81972879 81979999 -
n.a. Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|V7ATI6|V7ATI6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0421400 LjG1.1_chr3 82979547 82984196 +
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7LI80|G7LI80_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0421800 LjG1.1_chr3 83018360 83030355 +
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A075D396|A0A075D396_CICAR NBS-LRR protein; Found in the gene: LotjaGi3g1v0422100 LjG1.1_chr3 83081903 83088852 +
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q9CAK1|RLM1B_ARATH Disease resistance protein RML1B; TrEMBL-Plants: tr|A0A1J7FRL2|A0A1J7FRL2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0422100 LjG1.1_chr3 83081903 83088852 +
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A075D396|A0A075D396_CICAR NBS-LRR protein; Found in the gene: LotjaGi3g1v0422100 LjG1.1_chr3 83082076 83088855 +
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7LI80|G7LI80_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0422200 LjG1.1_chr3 83100245 83108463 +
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7LI80|G7LI80_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0422200 LjG1.1_chr3 83100245 83108463 +
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7LI80|G7LI80_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0422400 LjG1.1_chr3 83113300 83121198 -
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7LI80|G7LI80_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0422400 LjG1.1_chr3 83113300 83124743 -
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7LI64|G7LI64_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0422900 LjG1.1_chr3 83171074 83186505 -
n.a. Fbd-associated f-box protein; TAIR: AT1G32375.1 F-box/RNI-like/FBD-like domains-containing protein; Swiss-Prot: sp|Q9LQM1|FBD39_ARATH Probable FBD-associated F-box protein At1g32375; TrEMBL-Plants: tr|A0A151SH40|A0A151SH40_CAJCA F-box/FBD/LRR-repeat protein family; Found in the gene: LotjaGi3g1v0426900 LjG1.1_chr3 83775750 83814963 -
n.a. Fbd-associated f-box protein; TAIR: AT1G32375.1 F-box/RNI-like/FBD-like domains-containing protein; Swiss-Prot: sp|Q9LQM1|FBD39_ARATH Probable FBD-associated F-box protein At1g32375; TrEMBL-Plants: tr|A0A151SH40|A0A151SH40_CAJCA F-box/FBD/LRR-repeat protein family; Found in the gene: LotjaGi3g1v0426900 LjG1.1_chr3 83812250 83814975 -
n.a. F-box protein; TAIR: AT1G21990.1 F-box/RNI-like/FBD-like domains-containing protein; Swiss-Prot: sp|Q9LM64|FB16_ARATH Putative F-box protein At1g21990; TrEMBL-Plants: tr|A0A151SH40|A0A151SH40_CAJCA F-box/FBD/LRR-repeat protein family; Found in the gene: LotjaGi3g1v0427100 LjG1.1_chr3 83819294 83822421 -
n.a. Fbd-associated f-box protein; TAIR: AT3G52680.1 F-box/RNI-like/FBD-like domains-containing protein; Swiss-Prot: sp|Q9LXJ6|FDL21_ARATH F-box/FBD/LRR-repeat protein At3g52680; TrEMBL-Plants: tr|A0A151SH40|A0A151SH40_CAJCA F-box/FBD/LRR-repeat protein family; Found in the gene: LotjaGi3g1v0427500 LjG1.1_chr3 83873667 83876850 -
n.a. Fbd-associated f-box protein; TAIR: AT3G52680.1 F-box/RNI-like/FBD-like domains-containing protein; Swiss-Prot: sp|Q9LXJ6|FDL21_ARATH F-box/FBD/LRR-repeat protein At3g52680; TrEMBL-Plants: tr|A0A151SH40|A0A151SH40_CAJCA F-box/FBD/LRR-repeat protein family; Found in the gene: LotjaGi3g1v0427500 LjG1.1_chr3 83873695 83876762 -
n.a. F-box protein; TAIR: AT4G03220.1 Protein with RNI-like/FBD-like domain; Swiss-Prot: sp|Q9ZR09|FDL25_ARATH Putative F-box/FBD/LRR-repeat protein At4g03220; TrEMBL-Plants: tr|A0A0B2PPL9|A0A0B2PPL9_GLYSO F-box/LRR-repeat protein 13; Found in the gene: LotjaGi3g1v0428400 LjG1.1_chr3 83965966 83968932 -
n.a. F-box protein, putative; TAIR: AT1G61320.1 FBD / Leucine Rich Repeat domains containing protein; Swiss-Prot: sp|O64788|FBD33_ARATH FBD-associated F-box protein At1g61320; TrEMBL-Plants: tr|A0A0B2PPL9|A0A0B2PPL9_GLYSO F-box/LRR-repeat protein 13; Found in the gene: LotjaGi3g1v0428500_LC LjG1.1_chr3 83972110 83973654 -
n.a. Leucine-rich repeat-containing protein 1; TAIR: AT5G19680.1 Leucine-rich repeat (LRR) family protein; Swiss-Prot: sp|Q54Q39|PP1R7_DICDI Protein phosphatase 1 regulatory subunit pprA; TrEMBL-Plants: tr|G7L846|G7L846_MEDTR Protein phosphatase 1 regulatory subunit 7; Found in the gene: LotjaGi3g1v0432400 LjG1.1_chr3 84402765 84412052 +
n.a. Leucine-rich repeat-containing protein 1; TAIR: AT5G19680.1 Leucine-rich repeat (LRR) family protein; Swiss-Prot: sp|Q3T0W4|PP1R7_BOVIN Protein phosphatase 1 regulatory subunit 7; TrEMBL-Plants: tr|G7L846|G7L846_MEDTR Protein phosphatase 1 regulatory subunit 7; Found in the gene: LotjaGi3g1v0432400 LjG1.1_chr3 84403222 84404896 +
n.a. Kinase; TAIR: AT4G03390.1 STRUBBELIG-receptor family 3; Swiss-Prot: sp|Q6R2K3|SRF3_ARATH Protein STRUBBELIG-RECEPTOR FAMILY 3; TrEMBL-Plants: tr|K7M2R2|K7M2R2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0441700 LjG1.1_chr3 85431800 85439369 -
n.a. Kinase; TAIR: AT4G03390.1 STRUBBELIG-receptor family 3; Swiss-Prot: sp|Q6R2K3|SRF3_ARATH Protein STRUBBELIG-RECEPTOR FAMILY 3; TrEMBL-Plants: tr|K7M2R2|K7M2R2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0441700 LjG1.1_chr3 85431844 85439093 -
n.a. Receptor kinase; TAIR: AT1G28440.1 HAESA-like 1; Swiss-Prot: sp|Q9SGP2|HSL1_ARATH Receptor-like protein kinase HSL1; TrEMBL-Plants: tr|A0A072VC59|A0A072VC59_MEDTR LRR receptor-like kinase family protein; Found in the gene: LotjaGi3g1v0447800 LjG1.1_chr3 86109323 86113163 +
n.a. Leucine-rich repeat protein kinase family protein; TAIR: AT4G28380.1 Leucine-rich repeat (LRR) family protein; Swiss-Prot: sp|Q9LJ64|PLRX1_ARATH Pollen-specific leucine-rich repeat extensin-like protein 1; TrEMBL-Plants: tr|A0A072ULP2|A0A072ULP2_MEDTR LRR/extensin; Found in the gene: LotjaGi3g1v0452400 LjG1.1_chr3 86587040 86589610 -
n.a. Kinase; TAIR: AT4G03390.1 STRUBBELIG-receptor family 3; Swiss-Prot: sp|Q6R2K3|SRF3_ARATH Protein STRUBBELIG-RECEPTOR FAMILY 3; TrEMBL-Plants: tr|A0A0B2QNC2|A0A0B2QNC2_GLYSO Protein STRUBBELIG-RECEPTOR FAMILY 3; Found in the gene: LotjaGi3g1v0458500 LjG1.1_chr3 87311859 87319850 +
n.a. Leucine-rich repeat family protein; TAIR: AT4G03260.1 Outer arm dynein light chain 1 protein; Swiss-Prot: sp|Q54Q39|PP1R7_DICDI Protein phosphatase 1 regulatory subunit pprA; TrEMBL-Plants: tr|K7LU20|K7LU20_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0461700 LjG1.1_chr3 87676715 87685731 -
n.a. Histone-lysine N-methyltransferase; TAIR: AT4G15180.1 SET domain protein 2; Swiss-Prot: sp|O23372|ATXR3_ARATH Histone-lysine N-methyltransferase ATXR3; TrEMBL-Plants: tr|K7KY87|K7KY87_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0462600 LjG1.1_chr3 87752280 87768739 -
n.a. Histone-lysine N-methyltransferase; TAIR: AT4G15180.1 SET domain protein 2; Swiss-Prot: sp|O23372|ATXR3_ARATH Histone-lysine N-methyltransferase ATXR3; TrEMBL-Plants: tr|K7KY87|K7KY87_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0462600 LjG1.1_chr3 87752730 87768680 -
n.a. Receptor-kinase-like protein; TAIR: AT2G01820.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9SIT1|TMK3_ARATH Receptor-like kinase TMK3; TrEMBL-Plants: tr|I1LRL0|I1LRL0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0472000 LjG1.1_chr3 88913776 88918381 +
n.a. F-box family protein; TAIR: AT1G67190.1 F-box/RNI-like superfamily protein; Swiss-Prot: sp|Q9ZW88|FBL34_ARATH F-box/LRR-repeat protein At1g67190; TrEMBL-Plants: tr|G7JIE1|G7JIE1_MEDTR F-box/LRR plant protein; Found in the gene: LotjaGi3g1v0477300 LjG1.1_chr3 89369866 89373370 +
n.a. F-box family protein; TAIR: AT1G67190.1 F-box/RNI-like superfamily protein; Swiss-Prot: sp|Q9ZW88|FBL34_ARATH F-box/LRR-repeat protein At1g67190; TrEMBL-Plants: tr|G7JIE1|G7JIE1_MEDTR F-box/LRR plant protein; Found in the gene: LotjaGi3g1v0477300 LjG1.1_chr3 89369964 89372138 +
n.a. F-box family protein; TAIR: AT1G67190.1 F-box/RNI-like superfamily protein; Swiss-Prot: sp|Q9ZW88|FBL34_ARATH F-box/LRR-repeat protein At1g67190; TrEMBL-Plants: tr|G7JIE1|G7JIE1_MEDTR F-box/LRR plant protein; Found in the gene: LotjaGi3g1v0477300 LjG1.1_chr3 89370495 89371757 +
n.a. FBD-associated F-box protein; TAIR: AT4G00160.1 F-box/RNI-like/FBD-like domains-containing protein; Swiss-Prot: sp|Q8LF09|FDL23_ARATH F-box/FBD/LRR-repeat protein At4g00160; TrEMBL-Plants: tr|I3S460|I3S460_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0484600 LjG1.1_chr3 90194505 90196133 +
n.a. FBD-associated F-box protein; TAIR: AT5G56420.1 F-box/RNI-like/FBD-like domains-containing protein; Swiss-Prot: sp|Q9FM89|FDL38_ARATH F-box/FBD/LRR-repeat protein At5g56420; TrEMBL-Plants: tr|V7B6U0|V7B6U0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0494900 LjG1.1_chr3 91301884 91307389 -
n.a. FBD-associated F-box protein; TAIR: AT5G56420.1 F-box/RNI-like/FBD-like domains-containing protein; Swiss-Prot: sp|Q9FM89|FDL38_ARATH F-box/FBD/LRR-repeat protein At5g56420; TrEMBL-Plants: tr|V7B6U0|V7B6U0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0494900 LjG1.1_chr3 91302545 91307221 -
n.a. FBD-associated F-box protein; TAIR: AT5G56420.1 F-box/RNI-like/FBD-like domains-containing protein; Swiss-Prot: sp|Q9FM89|FDL38_ARATH F-box/FBD/LRR-repeat protein At5g56420; TrEMBL-Plants: tr|V7B6U0|V7B6U0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0494900 LjG1.1_chr3 91303531 91307051 -