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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

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  • IPR001650
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We have found 509 results. Now displaying 6 of 11 with 50 rows per page. This search has taken 7.222s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. ATP-dependent RNA helicase; TAIR: AT3G09720.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q84TG1|RH57_ARATH DEAD-box ATP-dependent RNA helicase 57; TrEMBL-Plants: tr|V7CHF2|V7CHF2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0693200 LjG1.1_chr1 126100146 126104114 +
n.a. ATP-dependent RNA helicase; TAIR: AT3G09720.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q84TG1|RH57_ARATH DEAD-box ATP-dependent RNA helicase 57; TrEMBL-Plants: tr|V7CJG4|V7CJG4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0693200 LjG1.1_chr1 126100537 126104114 +
n.a. ATP-dependent RNA helicase, putative; TAIR: AT1G26370.1 RNA helicase family protein; Swiss-Prot: sp|F4IE66|PRP22_ARATH Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10; TrEMBL-Plants: tr|K7K7U5|K7K7U5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0718000 LjG1.1_chr1 128633815 128640695 +
n.a. ATP-dependent RNA helicase, putative; TAIR: AT1G26370.1 RNA helicase family protein; Swiss-Prot: sp|F4IE66|PRP22_ARATH Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10; TrEMBL-Plants: tr|K7K7U5|K7K7U5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0718000 LjG1.1_chr1 128634378 128640066 +
n.a. ATP-dependent RNA helicase, putative; TAIR: AT1G26370.1 RNA helicase family protein; Swiss-Prot: sp|F4IE66|PRP22_ARATH Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10; TrEMBL-Plants: tr|K7K7U5|K7K7U5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0718000 LjG1.1_chr1 128635053 128640066 +
n.a. ATP-dependent RNA helicase, putative; TAIR: AT3G62310.3 RNA helicase family protein; Swiss-Prot: sp|Q9LZQ9|DEAH2_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2; TrEMBL-Plants: tr|I1NBE6|I1NBE6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0757600 LjG1.1_chr1 133077212 133081998 -
n.a. ATP-dependent RNA helicase, putative; TAIR: AT3G62310.1 RNA helicase family protein; Swiss-Prot: sp|Q9LZQ9|DEAH2_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2; TrEMBL-Plants: tr|G7ICV1|G7ICV1_MEDTR Pre-mRNA splicing factor ATP-dependent RNA helicase; Found in the gene: LotjaGi1g1v0757600 LjG1.1_chr1 133077212 133081998 -
n.a. ATP-dependent RNA helicase, putative; TAIR: AT3G62310.3 RNA helicase family protein; Swiss-Prot: sp|Q9LZQ9|DEAH2_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2; TrEMBL-Plants: tr|I1NBE6|I1NBE6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0757600 LjG1.1_chr1 133077943 133081859 -
n.a. ATP-dependent RNA helicase, putative; TAIR: AT3G62310.1 RNA helicase family protein; Swiss-Prot: sp|Q9LZQ9|DEAH2_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2; TrEMBL-Plants: tr|I1NBE6|I1NBE6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0757600 LjG1.1_chr1 133077943 133081859 -
n.a. ATP-dependent RNA helicase, putative; TAIR: AT3G62310.2 RNA helicase family protein; Swiss-Prot: sp|Q9LZQ9|DEAH2_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2; TrEMBL-Plants: tr|I1NBE6|I1NBE6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0757600 LjG1.1_chr1 133079500 133081859 -
n.a. ATP-dependent RNA helicase, putative; TAIR: AT3G62310.3 RNA helicase family protein; Swiss-Prot: sp|Q9LZQ9|DEAH2_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2; TrEMBL-Plants: tr|I1NBE6|I1NBE6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0757600 LjG1.1_chr1 133079528 133081859 -
n.a. ATP-dependent RNA helicase DeaD; TAIR: AT2G47330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|O22907|RH24_ARATH DEAD-box ATP-dependent RNA helicase 24; TrEMBL-Plants: tr|G7KTM4|G7KTM4_MEDTR DEAD-box ATP-dependent RNA helicase-like protein; Found in the gene: LotjaGi1g1v0758900 LjG1.1_chr1 133225458 133230046 -
n.a. SNF2 domain-containing protein / helicase domain-containing protein; TAIR: AT2G16390.2 SNF2 domain-containing protein / helicase domain-containing protein; Swiss-Prot: sp|Q9SIW2|CHR35_ARATH Protein CHROMATIN REMODELING 35; TrEMBL-Plants: tr|I1LVC4|I1LVC4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0781900 LjG1.1_chr1 135510875 135516615 +
n.a. SNF2 domain-containing protein / helicase domain-containing protein; TAIR: AT2G16390.2 SNF2 domain-containing protein / helicase domain-containing protein; Swiss-Prot: sp|Q9SIW2|CHR35_ARATH Protein CHROMATIN REMODELING 35; TrEMBL-Plants: tr|I1LVC4|I1LVC4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0781900 LjG1.1_chr1 135510876 135517101 +
n.a. Endoribonuclease Dicer-like protein 3; TAIR: AT1G01040.1 dicer-like 1; Swiss-Prot: sp|Q9SP32|DCL1_ARATH Endoribonuclease Dicer homolog 1; TrEMBL-Plants: tr|K7N0F5|K7N0F5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0798000 LjG1.1_chr1 136814701 136827226 -
n.a. Endoribonuclease Dicer-like protein 3; TAIR: AT1G01040.1 dicer-like 1; Swiss-Prot: sp|Q9SP32|DCL1_ARATH Endoribonuclease Dicer homolog 1; TrEMBL-Plants: tr|K7N0F5|K7N0F5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0798000 LjG1.1_chr1 136815175 136826448 -
n.a. Endoribonuclease Dicer-like protein 3; TAIR: AT1G01040.1 dicer-like 1; Swiss-Prot: sp|Q9SP32|DCL1_ARATH Endoribonuclease Dicer homolog 1; TrEMBL-Plants: tr|K7N0F5|K7N0F5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0798000 LjG1.1_chr1 136815175 136826484 -
n.a. DNA/RNA helicase protein; TAIR: AT2G02090.1 SNF2 domain-containing protein / helicase domain-containing protein; Swiss-Prot: sp|Q9ZUL5|CHR19_ARATH Protein CHROMATIN REMODELING 19; TrEMBL-Plants: tr|I1NCZ8|I1NCZ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0013900 LjG1.1_chr2 5057751 5078721 -
n.a. ATP-dependent DNA helicase family protein; TAIR: AT2G01440.1 DEAD/DEAH box RNA helicase family protein; Swiss-Prot: sp|F4INA9|RECG_ARATH ATP-dependent DNA helicase homolog RECG, chloroplastic; TrEMBL-Plants: tr|G7I947|G7I947_MEDTR ATP-dependent DNA helicase RecG; Found in the gene: LotjaGi2g1v0063100 LjG1.1_chr2 14597446 14632821 -
n.a. ATP-dependent DNA helicase family protein; TAIR: AT2G01440.1 DEAD/DEAH box RNA helicase family protein; Swiss-Prot: sp|F4INA9|RECG_ARATH ATP-dependent DNA helicase homolog RECG, chloroplastic; TrEMBL-Plants: tr|G7I947|G7I947_MEDTR ATP-dependent DNA helicase RecG; Found in the gene: LotjaGi2g1v0063100 LjG1.1_chr2 14597475 14632804 -
n.a. ATP-dependent RNA helicase FAL1; TAIR: AT3G03300.1 dicer-like 2; Swiss-Prot: sp|Q3EBC8|DCL2_ARATH Endoribonuclease Dicer homolog 2; TrEMBL-Plants: tr|I1L0G0|I1L0G0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0077900_LC LjG1.1_chr2 20853230 20865508 -
n.a. ATP-dependent RNA helicase RhlB; TAIR: AT3G03300.1 dicer-like 2; Swiss-Prot: sp|Q3EBC8|DCL2_ARATH Endoribonuclease Dicer homolog 2; TrEMBL-Plants: tr|I1L0G0|I1L0G0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0077900_LC LjG1.1_chr2 20853230 20865508 -
n.a. ATP-dependent RNA helicase; TAIR: AT4G09730.1 RH39; Swiss-Prot: sp|Q5VRY0|RH39_ORYSJ DEAD-box ATP-dependent RNA helicase 39; TrEMBL-Plants: tr|I1JDA7|I1JDA7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0116900 LjG1.1_chr2 43080200 43096421 -
n.a. ATP-dependent RNA helicase; TAIR: AT4G09730.1 RH39; Swiss-Prot: sp|Q5VRY0|RH39_ORYSJ DEAD-box ATP-dependent RNA helicase 39; TrEMBL-Plants: tr|I1JDA7|I1JDA7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0116900 LjG1.1_chr2 43086116 43096421 -
n.a. ATP-dependent RNA helicase, putative; TAIR: AT1G33390.1 RNA helicase family protein; Swiss-Prot: sp|Q9C813|DEAHD_ARATH ATP-dependent RNA helicase DEAH13; TrEMBL-Plants: tr|I1J7X3|I1J7X3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0125300 LjG1.1_chr2 45988316 45994720 +
n.a. ATP-dependent RNA helicase; TAIR: AT5G62190.1 DEAD box RNA helicase (PRH75); Swiss-Prot: sp|Q41382|RH7_SPIOL DEAD-box ATP-dependent RNA helicase 7; TrEMBL-Plants: tr|A0A151QN94|A0A151QN94_CAJCA DEAD-box ATP-dependent RNA helicase 7; Found in the gene: LotjaGi2g1v0154800 LjG1.1_chr2 55261458 55266126 -
n.a. ATP-dependent RNA helicase DeaD; TAIR: AT5G60990.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp|Q8GY84|RH10_ARATH DEAD-box ATP-dependent RNA helicase 10; TrEMBL-Plants: tr|K7KC67|K7KC67_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0167700 LjG1.1_chr2 57879254 57886055 +
n.a. ATP-dependent RNA helicase DDX47; TAIR: AT5G60990.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp|Q8GY84|RH10_ARATH DEAD-box ATP-dependent RNA helicase 10; TrEMBL-Plants: tr|A0A1J7G8N7|A0A1J7G8N7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0167700 LjG1.1_chr2 57879682 57885032 +
n.a. ATP-dependent RNA helicase DeaD; TAIR: AT5G60990.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp|Q8GY84|RH10_ARATH DEAD-box ATP-dependent RNA helicase 10; TrEMBL-Plants: tr|K7KC67|K7KC67_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0167700 LjG1.1_chr2 57879682 57885344 +
n.a. ATP-dependent RNA helicase DeaD; TAIR: AT5G60990.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp|Q8GY84|RH10_ARATH DEAD-box ATP-dependent RNA helicase 10; TrEMBL-Plants: tr|K7KC67|K7KC67_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0167700 LjG1.1_chr2 57879867 57885344 +
n.a. ATP-dependent RNA helicase DDX47; TAIR: AT5G60990.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp|Q8GY84|RH10_ARATH DEAD-box ATP-dependent RNA helicase 10; TrEMBL-Plants: tr|K7KC67|K7KC67_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0167700 LjG1.1_chr2 57879867 57885344 +
n.a. ATP-dependent RNA helicase; TAIR: AT1G58060.1 RNA helicase family protein; Swiss-Prot: sp|F4I9Q5|DEXH7_ARATH DExH-box ATP-dependent RNA helicase DExH7, chloroplastic; TrEMBL-Plants: tr|A0A0R0F600|A0A0R0F600_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0196000 LjG1.1_chr2 63008976 63014916 -
n.a. ATP-dependent RNA helicase DB10; TAIR: AT5G14610.2 DEAD box RNA helicase family protein; Swiss-Prot: sp|Q9LYJ9|RH46_ARATH DEAD-box ATP-dependent RNA helicase 46; TrEMBL-Plants: tr|K7KNL8|K7KNL8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0244000 LjG1.1_chr2 70765907 70772067 -
n.a. ATP-dependent RNA helicase; TAIR: AT5G39840.1 ATP-dependent RNA helicase; Swiss-Prot: sp|F4KFV7|SUV3L_ARATH DExH-box ATP-dependent RNA helicase DExH18, mitochondrial; TrEMBL-Plants: tr|A0A1J7FQS0|A0A1J7FQS0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0259000 LjG1.1_chr2 72651107 72659535 -
n.a. ATP-dependent RNA helicase, putative; TAIR: AT2G01130.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp|F4IM84|DEXH5_ARATH DExH-box ATP-dependent RNA helicase DExH5, mitochondrial; TrEMBL-Plants: tr|K7LD94|K7LD94_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0273300 LjG1.1_chr2 74450485 74465139 +
n.a. ATP-dependent RNA helicase, putative; TAIR: AT2G01130.2 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp|F4IM84|DEXH5_ARATH DExH-box ATP-dependent RNA helicase DExH5, mitochondrial; TrEMBL-Plants: tr|K7LD94|K7LD94_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0273300 LjG1.1_chr2 74451189 74465139 +
n.a. ATP-dependent RNA helicase family protein; TAIR: AT1G70070.1 DEAD/DEAH box helicase; Swiss-Prot: sp|B9DFG3|ISE2_ARATH DExH-box ATP-dependent RNA helicase DExH15 chloroplastic; TrEMBL-Plants: tr|K7K1N0|K7K1N0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0312600 LjG1.1_chr2 78752282 78758783 +
n.a. ATP dependent RNA helicase; TAIR: AT1G31970.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp|Q6YS30|RH5_ORYSJ DEAD-box ATP-dependent RNA helicase 5; TrEMBL-Plants: tr|A0A0L9THZ8|A0A0L9THZ8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0340100 LjG1.1_chr2 81693379 81717958 -
n.a. ATP dependent RNA helicase; TAIR: AT1G31970.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp|Q6YS30|RH5_ORYSJ DEAD-box ATP-dependent RNA helicase 5; TrEMBL-Plants: tr|A0A0L9THZ8|A0A0L9THZ8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0340100 LjG1.1_chr2 81700989 81705801 -
n.a. ATP-dependent RNA helicase DeaD; TAIR: AT1G31360.1 RECQ helicase L2; Swiss-Prot: sp|Q9FT73|MED34_ARATH Mediator of RNA polymerase II transcription subunit 34; TrEMBL-Plants: tr|A0A151RUE2|A0A151RUE2_CAJCA ATP-dependent DNA helicase Q1; Found in the gene: LotjaGi2g1v0344800 LjG1.1_chr2 82187441 82197739 +
n.a. DNA/RNA helicase protein; TAIR: AT5G66750.1 chromatin remodeling 1; Swiss-Prot: sp|Q9XFH4|DDM1_ARATH ATP-dependent DNA helicase DDM1; TrEMBL-Plants: tr|I1J8V7|I1J8V7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0390800 LjG1.1_chr2 88691431 88697608 -
n.a. DNA/RNA helicase protein; TAIR: AT5G66750.1 chromatin remodeling 1; Swiss-Prot: sp|Q9XFH4|DDM1_ARATH ATP-dependent DNA helicase DDM1; TrEMBL-Plants: tr|I1J8V7|I1J8V7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0390800 LjG1.1_chr2 88691469 88697464 -
n.a. DNA/RNA helicase protein; TAIR: AT5G66750.1 chromatin remodeling 1; Swiss-Prot: sp|Q9XFH4|DDM1_ARATH ATP-dependent DNA helicase DDM1; TrEMBL-Plants: tr|A0A0B2RWD8|A0A0B2RWD8_GLYSO ATP-dependent DNA helicase DDM1; Found in the gene: LotjaGi2g1v0390800 LjG1.1_chr2 88691841 88697011 -
n.a. ATP-dependent RNA helicase; TAIR: AT5G51280.1 DEAD-box protein abstrakt; Swiss-Prot: sp|Q9LU46|RH35_ARATH DEAD-box ATP-dependent RNA helicase 35; TrEMBL-Plants: tr|A0A151TW33|A0A151TW33_CAJCA DEAD-box ATP-dependent RNA helicase 35; Found in the gene: LotjaGi2g1v0398600 LjG1.1_chr2 89572442 89575878 +
n.a. ATP-dependent RNA helicase; TAIR: AT5G51280.1 DEAD-box protein abstrakt; Swiss-Prot: sp|Q9LU46|RH35_ARATH DEAD-box ATP-dependent RNA helicase 35; TrEMBL-Plants: tr|A0A151TW33|A0A151TW33_CAJCA DEAD-box ATP-dependent RNA helicase 35; Found in the gene: LotjaGi2g1v0398600 LjG1.1_chr2 89573516 89575300 +
n.a. ATP-dependent RNA helicase; TAIR: AT5G51280.1 DEAD-box protein abstrakt; Swiss-Prot: sp|Q9LU46|RH35_ARATH DEAD-box ATP-dependent RNA helicase 35; TrEMBL-Plants: tr|A0A151TW33|A0A151TW33_CAJCA DEAD-box ATP-dependent RNA helicase 35; Found in the gene: LotjaGi2g1v0398600 LjG1.1_chr2 89573531 89575300 +
n.a. SNF2 domain-containing protein / helicase domain-containing protein; TAIR: AT1G05490.1 chromatin remodeling 31; Swiss-Prot: sp|F4I8S3|CLSY3_ARATH SNF2 domain-containing protein CLASSY 3; TrEMBL-Plants: tr|A0A1J7GYJ7|A0A1J7GYJ7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0418200_LC LjG1.1_chr2 91661158 91665227 +
n.a. ATP-dependent RNA helicase; TAIR: AT4G14790.1 ATP-dependent RNA helicase; Swiss-Prot: sp|Q9SMX1|SUV3M_ARATH DExH-box ATP-dependent RNA helicase DExH16, mitochondrial; TrEMBL-Plants: tr|I1LFV4|I1LFV4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0453500 LjG1.1_chr2 94675469 94681464 +
n.a. DNA/RNA helicase protein; TAIR: AT3G06010.1 SNF2/Brahma-type chromatin-remodeling protein CHR12; Swiss-Prot: sp|F4J9M5|CHR12_ARATH Probable ATP-dependent DNA helicase CHR12; TrEMBL-Plants: tr|I1LFS4|I1LFS4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0457100 LjG1.1_chr2 95059185 95066827 -
n.a. DNA repair/recombination protein; TAIR: AT3G19210.1 DNA repair/recombination protein; Swiss-Prot: sp|Q0PCS3|CHR25_ARATH Protein CHROMATIN REMODELING 25; TrEMBL-Plants: tr|K7K5N1|K7K5N1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0461900 LjG1.1_chr2 95508812 95519487 -