Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR011545
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 320 results. Now displaying 5 of 7 with 50 rows per page. This search has taken 5.750s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. ATP-dependent RNA helicase, putative; TAIR: AT5G04895.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp|F4HYJ7|DEXH3_ARATH DExH-box ATP-dependent RNA helicase DExH3; TrEMBL-Plants: tr|I1KVZ2|I1KVZ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0302600 LjG1.1_chr3 63170440 63185472 +
n.a. ATP-dependent RNA helicase, putative; TAIR: AT5G04895.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp|F4HYJ7|DEXH3_ARATH DExH-box ATP-dependent RNA helicase DExH3; TrEMBL-Plants: tr|I1KVZ2|I1KVZ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0302600 LjG1.1_chr3 63171160 63180981 +
n.a. ATP-dependent RNA helicase, putative; TAIR: AT5G04895.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp|F4HYJ7|DEXH3_ARATH DExH-box ATP-dependent RNA helicase DExH3; TrEMBL-Plants: tr|I1KVZ2|I1KVZ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0302600 LjG1.1_chr3 63171234 63185039 +
n.a. ATP-dependent RNA helicase; TAIR: AT5G11170.1 DEAD/DEAH box RNA helicase family protein; Swiss-Prot: sp|Q56XG6|RH15_ARATH DEAD-box ATP-dependent RNA helicase 15; TrEMBL-Plants: tr|A0A1J7GWF5|A0A1J7GWF5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0357800 LjG1.1_chr3 73998342 74003963 +
n.a. ATP-dependent RNA helicase; TAIR: AT5G11170.2 DEAD/DEAH box RNA helicase family protein; Swiss-Prot: sp|Q56XG6|RH15_ARATH DEAD-box ATP-dependent RNA helicase 15; TrEMBL-Plants: tr|A0A1J7GWF5|A0A1J7GWF5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0357800 LjG1.1_chr3 74000482 74003963 +
n.a. ATP-dependent RNA helicase; TAIR: AT5G11170.2 DEAD/DEAH box RNA helicase family protein; Swiss-Prot: sp|Q56XG6|RH15_ARATH DEAD-box ATP-dependent RNA helicase 15; TrEMBL-Plants: tr|A0A072UHT1|A0A072UHT1_MEDTR DEAD-box ATP-dependent RNA helicase-like protein; Found in the gene: LotjaGi3g1v0357800 LjG1.1_chr3 74000482 74004064 +
n.a. ATP-dependent RNA helicase; TAIR: AT5G11170.1 DEAD/DEAH box RNA helicase family protein; Swiss-Prot: sp|Q56XG6|RH15_ARATH DEAD-box ATP-dependent RNA helicase 15; TrEMBL-Plants: tr|A0A0R0J4W7|A0A0R0J4W7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0357800 LjG1.1_chr3 73998358 74004064 +
n.a. ATP-dependent RNA helicase; TAIR: AT5G11170.2 DEAD/DEAH box RNA helicase family protein; Swiss-Prot: sp|Q56XG6|RH15_ARATH DEAD-box ATP-dependent RNA helicase 15; TrEMBL-Plants: tr|A0A072UHT1|A0A072UHT1_MEDTR DEAD-box ATP-dependent RNA helicase-like protein; Found in the gene: LotjaGi3g1v0357800 LjG1.1_chr3 73998371 74004632 +
n.a. ATP-dependent RNA helicase; TAIR: AT5G11170.1 DEAD/DEAH box RNA helicase family protein; Swiss-Prot: sp|Q56XG6|RH15_ARATH DEAD-box ATP-dependent RNA helicase 15; TrEMBL-Plants: tr|A0A0R0J4W7|A0A0R0J4W7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0357800 LjG1.1_chr3 73998443 74004503 +
n.a. ATP-dependent RNA helicase; TAIR: AT5G11170.1 DEAD/DEAH box RNA helicase family protein; Swiss-Prot: sp|Q56XG6|RH15_ARATH DEAD-box ATP-dependent RNA helicase 15; TrEMBL-Plants: tr|A0A1J7GWF5|A0A1J7GWF5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0357800 LjG1.1_chr3 73998633 74004064 +
n.a. ATP-dependent RNA helicase; TAIR: AT5G11170.1 DEAD/DEAH box RNA helicase family protein; Swiss-Prot: sp|Q56XG6|RH15_ARATH DEAD-box ATP-dependent RNA helicase 15; TrEMBL-Plants: tr|A0A0R0J4W7|A0A0R0J4W7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0357800 LjG1.1_chr3 73998633 74004064 +
n.a. ATP-dependent RNA helicase; TAIR: AT5G11170.2 DEAD/DEAH box RNA helicase family protein; Swiss-Prot: sp|Q56XG6|RH15_ARATH DEAD-box ATP-dependent RNA helicase 15; TrEMBL-Plants: tr|A0A072UHT1|A0A072UHT1_MEDTR DEAD-box ATP-dependent RNA helicase-like protein; Found in the gene: LotjaGi3g1v0357800 LjG1.1_chr3 73999564 74004064 +
n.a. ATP-dependent RNA helicase; TAIR: AT5G11170.2 DEAD/DEAH box RNA helicase family protein; Swiss-Prot: sp|Q56XG6|RH15_ARATH DEAD-box ATP-dependent RNA helicase 15; TrEMBL-Plants: tr|A0A1J7GWF5|A0A1J7GWF5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0357800 LjG1.1_chr3 73999567 74004026 +
n.a. ATP-dependent RNA helicase; TAIR: AT5G11170.2 DEAD/DEAH box RNA helicase family protein; Swiss-Prot: sp|Q56XG6|RH15_ARATH DEAD-box ATP-dependent RNA helicase 15; TrEMBL-Plants: tr|A0A072UHT1|A0A072UHT1_MEDTR DEAD-box ATP-dependent RNA helicase-like protein; Found in the gene: LotjaGi3g1v0357800 LjG1.1_chr3 73999567 74004064 +
n.a. ATP-dependent RNA helicase DeaD; TAIR: AT3G16840.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|A2XVF7|RH13_ORYSI DEAD-box ATP-dependent RNA helicase 13; TrEMBL-Plants: tr|I1KIF1|I1KIF1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0378400 LjG1.1_chr3 77096644 77107217 +
n.a. ATP-dependent RNA helicase; TAIR: AT4G00660.1 RNAhelicase-like 8; Swiss-Prot: sp|Q8RXK6|RH8_ARATH DEAD-box ATP-dependent RNA helicase 8; TrEMBL-Plants: tr|A0A067KA17|A0A067KA17_JATCU Uncharacterized protein; Found in the gene: LotjaGi3g1v0381000 LjG1.1_chr3 77355853 77371366 -
n.a. ATP-dependent RNA helicase; TAIR: AT4G00660.1 RNAhelicase-like 8; Swiss-Prot: sp|Q7XMK8|RH6_ORYSJ DEAD-box ATP-dependent RNA helicase 6; TrEMBL-Plants: tr|A0A067KA17|A0A067KA17_JATCU Uncharacterized protein; Found in the gene: LotjaGi3g1v0381000 LjG1.1_chr3 77358547 77362419 -
n.a. ATP-dependent RNA helicase; TAIR: AT4G00660.1 RNAhelicase-like 8; Swiss-Prot: sp|Q7XMK8|RH6_ORYSJ DEAD-box ATP-dependent RNA helicase 6; TrEMBL-Plants: tr|A0A067KA17|A0A067KA17_JATCU Uncharacterized protein; Found in the gene: LotjaGi3g1v0381000 LjG1.1_chr3 77358662 77362419 -
n.a. ATP-dependent RNA helicase; TAIR: AT4G00660.1 RNAhelicase-like 8; Swiss-Prot: sp|Q8RXK6|RH8_ARATH DEAD-box ATP-dependent RNA helicase 8; TrEMBL-Plants: tr|A0A067KA17|A0A067KA17_JATCU Uncharacterized protein; Found in the gene: LotjaGi3g1v0381000 LjG1.1_chr3 77358662 77363982 -
n.a. ATP-dependent RNA helicase; TAIR: AT4G00660.1 RNAhelicase-like 8; Swiss-Prot: sp|Q8RXK6|RH8_ARATH DEAD-box ATP-dependent RNA helicase 8; TrEMBL-Plants: tr|A0A067KA17|A0A067KA17_JATCU Uncharacterized protein; Found in the gene: LotjaGi3g1v0381000 LjG1.1_chr3 77358662 77363988 -
n.a. ATP-dependent RNA helicase; TAIR: AT5G63630.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FFQ1|RH31_ARATH DEAD-box ATP-dependent RNA helicase 31; TrEMBL-Plants: tr|V7ANI2|V7ANI2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0394000 LjG1.1_chr3 79329641 79335241 -
n.a. ATP-dependent RNA helicase; TAIR: AT1G54270.1 eif4a-2; Swiss-Prot: sp|P41382|IF410_TOBAC Eukaryotic initiation factor 4A-10; TrEMBL-Plants: tr|A0A151T9F2|A0A151T9F2_CAJCA Eukaryotic initiation factor 4A-10; Found in the gene: LotjaGi3g1v0420900 LjG1.1_chr3 82940031 82943496 +
n.a. ATP-dependent RNA helicase; TAIR: AT1G54270.1 eif4a-2; Swiss-Prot: sp|P41382|IF410_TOBAC Eukaryotic initiation factor 4A-10; TrEMBL-Plants: tr|A0A151T9F2|A0A151T9F2_CAJCA Eukaryotic initiation factor 4A-10; Found in the gene: LotjaGi3g1v0420900 LjG1.1_chr3 82940694 82943077 +
n.a. ATP-dependent RNA helicase; TAIR: AT1G54270.1 eif4a-2; Swiss-Prot: sp|P41381|IF4A8_TOBAC Eukaryotic initiation factor 4A-8; TrEMBL-Plants: tr|A0A0R0FUV4|A0A0R0FUV4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0420900 LjG1.1_chr3 82940858 82943077 +
n.a. ATP-dependent RNA helicase; TAIR: AT1G54270.1 eif4a-2; Swiss-Prot: sp|P41382|IF410_TOBAC Eukaryotic initiation factor 4A-10; TrEMBL-Plants: tr|A0A151T9F2|A0A151T9F2_CAJCA Eukaryotic initiation factor 4A-10; Found in the gene: LotjaGi3g1v0420900 LjG1.1_chr3 82940876 82943164 +
n.a. ATP-dependent RNA helicase; TAIR: AT1G54270.1 eif4a-2; Swiss-Prot: sp|P41382|IF410_TOBAC Eukaryotic initiation factor 4A-10; TrEMBL-Plants: tr|A0A151T9F2|A0A151T9F2_CAJCA Eukaryotic initiation factor 4A-10; Found in the gene: LotjaGi3g1v0420900 LjG1.1_chr3 82940985 82943085 +
n.a. ATP-dependent RNA helicase; TAIR: AT1G54270.2 eif4a-2; Swiss-Prot: sp|P41382|IF410_TOBAC Eukaryotic initiation factor 4A-10; TrEMBL-Plants: tr|A0A0R0FUV4|A0A0R0FUV4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0420900 LjG1.1_chr3 82940997 82943077 +
n.a. ATP-dependent RNA helicase; TAIR: AT2G33730.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|P93008|RH21_ARATH DEAD-box ATP-dependent RNA helicase 21; TrEMBL-Plants: tr|A0A1J7GI12|A0A1J7GI12_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0005200 LjG1.1_chr4 847826 850799 -
n.a. ATP-dependent RNA helicase p62; TAIR: AT5G63120.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q8W4R3|RH30_ARATH DEAD-box ATP-dependent RNA helicase 30; TrEMBL-Plants: tr|A0A072UQ07|A0A072UQ07_MEDTR DEAD-box ATP-dependent RNA helicase-like protein; Found in the gene: LotjaGi4g1v0229400 LjG1.1_chr4 53918258 53924010 +
n.a. ATP-dependent RNA helicase p62; TAIR: AT5G63120.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q5N7W4|RH30_ORYSJ DEAD-box ATP-dependent RNA helicase 30; TrEMBL-Plants: tr|A0A072URV4|A0A072URV4_MEDTR DEAD-box ATP-dependent RNA helicase-like protein; Found in the gene: LotjaGi4g1v0229400 LjG1.1_chr4 53918258 53924010 +
n.a. ATP-dependent RNA helicase DDX18; TAIR: AT3G18600.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9LIH9|RH51_ARATH DEAD-box ATP-dependent RNA helicase 51; TrEMBL-Plants: tr|A0A0S3R740|A0A0S3R740_PHAAN RNA helicase; Found in the gene: LotjaGi4g1v0262200_LC LjG1.1_chr4 62512172 62523002 +
n.a. ATP dependent RNA helicase; TAIR: AT3G58570.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9M2F9|RH52_ARATH DEAD-box ATP-dependent RNA helicase 52; TrEMBL-Plants: tr|A0A0R4J5P6|A0A0R4J5P6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0269800 LjG1.1_chr4 63510466 63513615 +
n.a. ATP-dependent RNA helicase, putative; TAIR: AT1G33390.1 RNA helicase family protein; Swiss-Prot: sp|Q9C813|DEAHD_ARATH ATP-dependent RNA helicase DEAH13; TrEMBL-Plants: tr|I1J7X3|I1J7X3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0317100 LjG1.1_chr4 69470824 69477617 +
n.a. ATP-dependent RNA helicase DeaD; TAIR: AT1G27880.1 DEAD/DEAH box RNA helicase family protein; Swiss-Prot: sp|Q0WVW7|RQL5_ARATH ATP-dependent DNA helicase Q-like 5; TrEMBL-Plants: tr|I1KRZ4|I1KRZ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0329000 LjG1.1_chr4 70779239 70786904 +
n.a. ATP-dependent RNA helicase; TAIR: AT5G19210.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q3E9C3|RH58_ARATH DEAD-box ATP-dependent RNA helicase 58, chloroplastic; TrEMBL-Plants: tr|A0A0R0JE29|A0A0R0JE29_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0353200 LjG1.1_chr4 73179044 73191079 +
n.a. ATP-dependent RNA helicase; TAIR: AT5G19210.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q3E9C3|RH58_ARATH DEAD-box ATP-dependent RNA helicase 58, chloroplastic; TrEMBL-Plants: tr|A0A0R0JE29|A0A0R0JE29_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0353200 LjG1.1_chr4 73179308 73191030 +
n.a. ATP-dependent RNA helicase; TAIR: AT5G19210.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q3E9C3|RH58_ARATH DEAD-box ATP-dependent RNA helicase 58, chloroplastic; TrEMBL-Plants: tr|A0A0R0JE29|A0A0R0JE29_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0353200 LjG1.1_chr4 73179775 73191079 +
n.a. Atp-dependent rna helicase; TAIR: AT5G19210.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q3E9C3|RH58_ARATH DEAD-box ATP-dependent RNA helicase 58, chloroplastic; TrEMBL-Plants: tr|A0A0R0JE29|A0A0R0JE29_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0353200 LjG1.1_chr4 73179872 73190931 +
n.a. ATP-dependent RNA helicase; TAIR: AT5G19210.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q3E9C3|RH58_ARATH DEAD-box ATP-dependent RNA helicase 58, chloroplastic; TrEMBL-Plants: tr|A0A0R0JE29|A0A0R0JE29_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0353200 LjG1.1_chr4 73180995 73183992 +
n.a. ATP-dependent RNA helicase; TAIR: AT4G15850.1 RNA helicase 1; Swiss-Prot: sp|Q7FGZ2|RH1_ARATH DEAD-box ATP-dependent RNA helicase 1; TrEMBL-Plants: tr|G7KG11|G7KG11_MEDTR DEAD-box ATP-dependent RNA helicase; Found in the gene: LotjaGi4g1v0361700 LjG1.1_chr4 74056862 74063351 -
n.a. ATP-dependent RNA helicase, putative; TAIR: AT1G27900.1 RNA helicase family protein; Swiss-Prot: sp|Q93Y16|DEAH4_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4; TrEMBL-Plants: tr|K7KQA5|K7KQA5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0363900 LjG1.1_chr4 74387712 74406277 -
n.a. ATP-dependent RNA helicase, putative; TAIR: AT1G27900.1 RNA helicase family protein; Swiss-Prot: sp|Q93Y16|DEAH4_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4; TrEMBL-Plants: tr|K7KQA5|K7KQA5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0363900 LjG1.1_chr4 74389356 74397078 -
n.a. ATP-dependent RNA helicase, putative; TAIR: AT1G27900.1 RNA helicase family protein; Swiss-Prot: sp|Q93Y16|DEAH4_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4; TrEMBL-Plants: tr|K7KQA5|K7KQA5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0363900 LjG1.1_chr4 74389360 74397087 -
n.a. RNA helicase; TAIR: AT3G18600.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q84T03|RH27_ORYSJ DEAD-box ATP-dependent RNA helicase 27; TrEMBL-Plants: tr|A0A0S3R740|A0A0S3R740_PHAAN RNA helicase; Found in the gene: LotjaGi4g1v0415000 LjG1.1_chr4 79045648 79051406 +
n.a. ATP-dependent RNA helicase; TAIR: AT1G63250.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp|Q9C8S9|RH48_ARATH Probable DEAD-box ATP-dependent RNA helicase 48; TrEMBL-Plants: tr|V7CPG8|V7CPG8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0423800 LjG1.1_chr4 79874902 79879457 -
n.a. ATP-dependent RNA helicase family protein; TAIR: AT2G06990.1 RNA helicase, ATP-dependent, SK12/DOB1 protein; Swiss-Prot: sp|Q9ZVW2|HEN2_ARATH DExH-box ATP-dependent RNA helicase DExH10; TrEMBL-Plants: tr|I1KPQ5|I1KPQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0439700 LjG1.1_chr4 81337700 81346166 -
n.a. ATP-dependent RNA helicase family protein; TAIR: AT2G06990.1 RNA helicase, ATP-dependent, SK12/DOB1 protein; Swiss-Prot: sp|Q9ZVW2|HEN2_ARATH DExH-box ATP-dependent RNA helicase DExH10; TrEMBL-Plants: tr|I1KPQ5|I1KPQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0439700 LjG1.1_chr4 81338415 81345976 -
n.a. ATP-dependent RNA helicase, putative; TAIR: AT1G48650.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp|F4HYJ7|DEXH3_ARATH DExH-box ATP-dependent RNA helicase DExH3; TrEMBL-Plants: tr|I1KQG1|I1KQG1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0461100 LjG1.1_chr4 83164923 83175888 +
n.a. ATP-dependent RNA helicase family protein; TAIR: AT3G26560.1 ATP-dependent RNA helicase; Swiss-Prot: sp|Q38953|DEAH5_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5; TrEMBL-Plants: tr|A0A1J7GSK6|A0A1J7GSK6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0008200 LjG1.1_chr5 1790558 1797484 -
n.a. ATP-dependent RNA helicase, putative; TAIR: AT3G26560.1 ATP-dependent RNA helicase; Swiss-Prot: sp|Q38953|DEAH5_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5; TrEMBL-Plants: tr|V7CUW8|V7CUW8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0008200 LjG1.1_chr5 1793433 1797265 -