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The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.
We have found 197 results. Now displaying 2 of 4 with 50 rows per page. This search has taken 5.369s to perform.
| Transcript | Name | Description | Chr | Start | End | Strand | Domain predictions | GO predictions |
|---|---|---|---|---|---|---|---|---|
| n.a. | dynamin homolog [Astragalus sinicus] gi|6625788|gb|AAF19398.1|AF203882_1 | chr3 | 5186739 | 5195972 | - | – | ||
| n.a. | Pleckstrin (PH) and lipid-binding START domains-containing protein isoform 1 [Theobroma cacao] gi|508787129|gb|EOY34385.1| | chr3 | 14559445 | 14567068 | - | – | ||
| n.a. | mRNA-decapping enzyme-like protein [Medicago truncatula] gi|357453179|ref|XP_003596866.1| | chr3 | 15874649 | 15881698 | + | – | ||
| n.a. | PREDICTED: BEACH domain-containing protein lvsC-like isoform X1 [Cicer arietinum] gi|502157839|ref|XP_004510928.1| | chr3 | 33456972 | 33485192 | + | – | ||
| n.a. | PREDICTED: adaptin ear-binding coat-associated protein 2-like [Glycine max] gi|356543898|ref|XP_003540395.1| | chr3 | 35124262 | 35127740 | - | – | ||
| n.a. | PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD2-like [Glycine max] gi|356544659|ref|XP_003540765.1| | chr3 | 42585629 | 42595505 | - | – | ||
| n.a. | PREDICTED: dynamin-2B-like [Glycine max] gi|356563206|ref|XP_003549855.1| | chr4 | 61734 | 98073 | + | – | ||
| n.a. | classical AGP [Gunnera manicata] gi|311294339|gb|ADP88925.1| | chr4 | 15294428 | 15306601 | - | – | ||
| n.a. | PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3-like [Cicer arietinum] gi|502150859|ref|XP_004508159.1| | chr4 | 31680412 | 31682445 | - | – | ||
| n.a. | Pleckstrin (PH) domain-containing protein isoform 1 [Theobroma cacao] gi|508777776|gb|EOY25032.1| | chr4 | 39843642 | 39850717 | - | – | ||
| n.a. | PREDICTED: oxysterol-binding protein-related protein 1C-like isoform 1 [Glycine max] gi|356552835|ref|XP_003544768.1| | chr5 | 4391941 | 4399091 | + | – | ||
| n.a. | PREDICTED: oxysterol-binding protein-related protein 1C-like isoform 1 [Glycine max] gi|356552835|ref|XP_003544768.1| | chr5 | 4391941 | 4397743 | + | – | ||
| n.a. | PREDICTED: BEACH domain-containing protein lvsA-like isoform X1 [Cicer arietinum] gi|502115252|ref|XP_004495161.1| | chr5 | 16303724 | 16322712 | + | – | ||
| n.a. | Non-intrinsic ABC protein 4 [Theobroma cacao] gi|508702515|gb|EOX94411.1| | chr5 | 17638761 | 17640922 | + | – | ||
| n.a. | Non-intrinsic ABC protein 4 [Theobroma cacao] gi|508702515|gb|EOX94411.1| | chr5 | 17676327 | 17679182 | + | – | ||
| n.a. | PREDICTED: serine/threonine-protein kinase CBK1-like [Glycine max] gi|356533751|ref|XP_003535423.1| | chr5 | 19175846 | 19181874 | - | – | ||
| n.a. | PREDICTED: phospholipase D p1-like, partial [Cicer arietinum] gi|502117952|ref|XP_004496027.1| | chr5 | 21963524 | 21975239 | + | – | ||
| n.a. | PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1-like [Cicer arietinum] gi|502118052|ref|XP_004496077.1| | chr5 | 24167953 | 24180393 | - | – | ||
| n.a. | PREDICTED: 3-phosphoinositide-dependent protein kinase 1-like isoform X2 [Cicer arietinum] gi|502118222|ref|XP_004496160.1| | chr5 | 24754718 | 24762352 | - | – | ||
| n.a. | PREDICTED: 3-phosphoinositide-dependent protein kinase 1-like isoform X2 [Cicer arietinum] gi|502118222|ref|XP_004496160.1| | chr5 | 24755418 | 24762352 | - | – | ||
| n.a. | PREDICTED: myotubularin-related protein 2-like [Cicer arietinum] gi|502118244|ref|XP_004496171.1| | chr5 | 24950374 | 24954708 | + | – | ||
| n.a. | Pleckstrin (PH) and lipid-binding START domains-containing protein [Theobroma cacao] gi|508726768|gb|EOY18665.1| | chr5 | 25946483 | 25954658 | + | – | ||
| n.a. | PREDICTED: ran-binding protein 1 homolog b-like [Glycine max] gi|356576095|ref|XP_003556169.1| | chr5 | 27046441 | 27049561 | + | – | ||
| n.a. | PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cicer arietinum] gi|502119064|ref|XP_004496492.1| | chr5 | 27717103 | 27724815 | - | – | ||
| n.a. | PREDICTED: GEM-like protein 4-like [Cicer arietinum] gi|502121267|ref|XP_004497247.1| | chr5 | 32902710 | 32909701 | - | – | ||
| n.a. | PREDICTED: GEM-like protein 4-like [Cicer arietinum] gi|502121267|ref|XP_004497247.1| | chr5 | 32902710 | 32903771 | - | – | ||
| n.a. | Serine/threonine protein kinase Nek9 [Medicago truncatula] gi|357439465|ref|XP_003590009.1| | chr6 | 476798 | 483158 | + | – | ||
| n.a. | RCC1 and BTB domain-containing protein [Medicago truncatula] gi|357460713|ref|XP_003600638.1| | chr6 | 3588296 | 3593342 | + | – | ||
| n.a. | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain isoform 1 [Theobroma cacao] gi|508785674|gb|EOY32930.1| | chr6 | 10706009 | 10713387 | - | – | ||
| n.a. | PREDICTED: phospholipase D p1-like [Glycine max] gi|356556110|ref|XP_003546370.1| | chr6 | 17337626 | 17345778 | + | – | ||
| n.a. | PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform X1 [Cicer arietinum] gi|502084857|ref|XP_004487777.1| | chr6 | 17769573 | 17784941 | + | – | ||
| n.a. | Kinase-START [Medicago truncatula] gi|357484695|ref|XP_003612635.1| | chr6 | 18053161 | 18065008 | + | – | ||
| n.a. | PREDICTED: protein kinase G11A-like [Glycine max] gi|356532843|ref|XP_003534979.1| | chr6 | 19365940 | 19371549 | + | – | ||
| n.a. | Pleckstrin-like (PH) domain protein; TAIR: AT2G30880.1 Pleckstrin homology (PH) domain-containing protein; Swiss-Prot: sp|Q7SYB5|DEFI6_DANRE Differentially expressed in FDCP 6 homolog; TrEMBL-Plants: tr|I1JJ22|I1JJ22_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0044400 | LjG1.1_chr1 | 6036794 | 6047528 | + | – | ||
| n.a. | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr|I1M739|I1M739_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0049200 | LjG1.1_chr1 | 6825463 | 6835374 | - | – | ||
| n.a. | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr|G7K368|G7K368_MEDTR Regulator of chromosome condensation (RCC1) family protein; Found in the gene: LotjaGi1g1v0049200 | LjG1.1_chr1 | 6826247 | 6833926 | - | – | ||
| n.a. | Rho GTPase-activating protein; TAIR: AT5G19390.1 Rho GTPase activation protein (RhoGAP) with PH domain-containing protein; Swiss-Prot: sp|Q8RWQ4|RGAP7_ARATH Rho GTPase-activating protein 7; TrEMBL-Plants: tr|A0A1J7HR12|A0A1J7HR12_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0050600 | LjG1.1_chr1 | 7221625 | 7235220 | - | – | ||
| n.a. | Pleckstrin homology domain-containing protein 1; TAIR: AT5G05710.1 Pleckstrin homology (PH) domain superfamily protein; Swiss-Prot: sp|Q9ST43|PH1_ARATH Pleckstrin homology domain-containing protein 1; TrEMBL-Plants: tr|T2DN45|T2DN45_PHAVU Pleckstrin homology domain-containing protein; Found in the gene: LotjaGi1g1v0078500 | LjG1.1_chr1 | 11323656 | 11324098 | + | – | ||
| n.a. | Oxysterol-binding protein; TAIR: AT4G08180.1 OSBP(oxysterol binding protein)-related protein 1C; Swiss-Prot: sp|Q8L751|ORP1C_ARATH Oxysterol-binding protein-related protein 1C; TrEMBL-Plants: tr|K7M7F8|K7M7F8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0180400 | LjG1.1_chr1 | 35000505 | 35007135 | + | – | ||
| n.a. | Oxysterol-binding protein; TAIR: AT4G08180.2 OSBP(oxysterol binding protein)-related protein 1C; Swiss-Prot: sp|Q8L751|ORP1C_ARATH Oxysterol-binding protein-related protein 1C; TrEMBL-Plants: tr|K7M7F8|K7M7F8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0180400 | LjG1.1_chr1 | 35000505 | 35007135 | + | – | ||
| n.a. | C2 and GRAM domain-containing protein; TAIR: AT5G50170.1 C2 calcium/lipid-binding and GRAM domain containing protein; Swiss-Prot: sp|Q9FGS8|C2GR2_ARATH C2 and GRAM domain-containing protein At5g50170; TrEMBL-Plants: tr|A0A0R0K9Z2|A0A0R0K9Z2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0196800 | LjG1.1_chr1 | 39829436 | 39835755 | + | – | ||
| n.a. | C2 and GRAM domain-containing protein; TAIR: AT5G50170.1 C2 calcium/lipid-binding and GRAM domain containing protein; Swiss-Prot: sp|Q9FGS8|C2GR2_ARATH C2 and GRAM domain-containing protein At5g50170; TrEMBL-Plants: tr|A0A0R0K9Z2|A0A0R0K9Z2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0196800 | LjG1.1_chr1 | 39829436 | 39835755 | + | – | ||
| n.a. | Oxysterol-binding protein; TAIR: AT4G08180.1 OSBP(oxysterol binding protein)-related protein 1C; Swiss-Prot: sp|Q8L751|ORP1C_ARATH Oxysterol-binding protein-related protein 1C; TrEMBL-Plants: tr|A0A151SU83|A0A151SU83_CAJCA Oxysterol-binding protein isogeny C2F12.05c; Found in the gene: LotjaGi1g1v0254300 | LjG1.1_chr1 | 61225774 | 61230841 | + | – | ||
| n.a. | Rho GTPase-activating protein; TAIR: AT4G24580.1 Rho GTPase activation protein (RhoGAP) with PH domain-containing protein; Swiss-Prot: sp|F4JQZ3|REN1_ARATH Rho GTPase-activating protein REN1; TrEMBL-Plants: tr|K7KU55|K7KU55_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0348300 | LjG1.1_chr1 | 81706471 | 81715769 | - | – | ||
| n.a. | Rho GTPase-activating protein; TAIR: AT4G24580.1 Rho GTPase activation protein (RhoGAP) with PH domain-containing protein; Swiss-Prot: sp|F4JQZ3|REN1_ARATH Rho GTPase-activating protein REN1; TrEMBL-Plants: tr|K7KU56|K7KU56_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0348300 | LjG1.1_chr1 | 81706534 | 81715886 | - | – | ||
| n.a. | GEM-like protein 1; TAIR: AT1G28200.1 FH interacting protein 1; Swiss-Prot: sp|Q9SE96|GEML1_ARATH GEM-like protein 1; TrEMBL-Plants: tr|A0A0L9UGE2|A0A0L9UGE2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0349700 | LjG1.1_chr1 | 81958250 | 81963354 | - | – | ||
| n.a. | Auxin canalization protein (DUF828); TAIR: AT4G32780.1 phosphoinositide binding protein; Swiss-Prot: sp|Q8W4K5|VAB_ARATH VAN3-binding protein; TrEMBL-Plants: tr|K7KIW2|K7KIW2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0404000 | LjG1.1_chr1 | 89289336 | 89293696 | + | – | ||
| n.a. | Auxin canalization protein (DUF828); TAIR: AT4G32780.1 phosphoinositide binding protein; Swiss-Prot: sp|Q8W4K5|VAB_ARATH VAN3-binding protein; TrEMBL-Plants: tr|K7KIW2|K7KIW2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0404000 | LjG1.1_chr1 | 89289848 | 89293488 | + | – | ||
| n.a. | Zinc finger FYVE domain-containing protein 1; TAIR: AT1G20110.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q9ASS2|FREE1_ARATH Protein FREE1; TrEMBL-Plants: tr|G7J5A0|G7J5A0_MEDTR RING/FYVE/PHD-type zinc finger protein; Found in the gene: LotjaGi1g1v0430400 | LjG1.1_chr1 | 92535891 | 92542169 | + | – | ||
| n.a. | Regulator of chromosome condensation (RCC1) family protein; TAIR: AT4G14368.2 Regulator of chromosome condensation (RCC1) family protein; Swiss-Prot: sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr|G7KX16|G7KX16_MEDTR Regulator of chromosome condensation (RCC1) family protein; Found in the gene: LotjaGi1g1v0452300 | LjG1.1_chr1 | 95218471 | 95226158 | - | – |