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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

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  • IPR011993
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We have found 197 results. Now displaying 4 of 4 with 50 rows per page. This search has taken 6.424s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. C2 domain-containing protein / GRAM domain-containing protein; TAIR: AT3G59660.1 C2 domain-containing protein / GRAM domain-containing protein; Swiss-Prot: sp|Q8W4D4|BAGP1_ARATH BAG-associated GRAM protein 1; TrEMBL-Plants: tr|K7K882|K7K882_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0068800 LjG1.1_chr4 8691301 8698341 +
n.a. Kinesin-like protein; TAIR: AT5G65930.2 kinesin-like calmodulin-binding protein (ZWICHEL); Swiss-Prot: sp|Q7XPJ0|KN14I_ORYSJ Kinesin-like protein KIN-14I; TrEMBL-Plants: tr|I1L4M5|I1L4M5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0141300 LjG1.1_chr4 21514494 21530142 -
n.a. Kinesin-like protein; TAIR: AT5G65930.2 kinesin-like calmodulin-binding protein (ZWICHEL); Swiss-Prot: sp|Q7XPJ0|KN14I_ORYSJ Kinesin-like protein KIN-14I; TrEMBL-Plants: tr|G7L7W2|G7L7W2_MEDTR Kinesin-like calmodulin-binding protein; Found in the gene: LotjaGi4g1v0141300 LjG1.1_chr4 21514800 21529320 -
n.a. GRAM domain protein/ABA-responsive-like protein; TAIR: AT2G22475.1 GRAM domain family protein; Swiss-Prot: sp|Q8S8F8|GEM_ARATH GLABRA2 expression modulator; TrEMBL-Plants: tr|A0A0B2QS05|A0A0B2QS05_GLYSO GLABRA2 expression modulator; Found in the gene: LotjaGi4g1v0159300 LjG1.1_chr4 28160803 28168705 +
n.a. Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT1G69710.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr|K7L9S7|K7L9S7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0185000 LjG1.1_chr4 40595021 40625396 -
n.a. Oxysterol-binding family protein; TAIR: AT4G22540.1 OSBP(oxysterol binding protein)-related protein 2A; Swiss-Prot: sp|Q940Y1|ORP2A_ARATH Oxysterol-binding protein-related protein 2A; TrEMBL-Plants: tr|K7MLJ7|K7MLJ7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0207000 LjG1.1_chr4 47959165 47966494 +
n.a. Serine/threonine-protein phosphatase 4 regulatory subunit 3; TAIR: AT3G06670.1 binding protein; Swiss-Prot: sp|Q5SP90|PP4R3_DANRE Serine/threonine-protein phosphatase 4 regulatory subunit 3; TrEMBL-Plants: tr|A0A0S3R9A6|A0A0S3R9A6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0329700 LjG1.1_chr4 70894197 70912331 +
n.a. Calcium-dependent lipid-binding family protein isoform protein; TAIR: AT1G48090.4 calcium-dependent lipid-binding family protein; Swiss-Prot: sp|Q54LB8|VP13A_DICDI Putative vacuolar protein sorting-associated protein 13A; TrEMBL-Plants: tr|A0A072V2R4|A0A072V2R4_MEDTR Calcium-dependent lipid-binding-like protein; Found in the gene: LotjaGi4g1v0334900 LjG1.1_chr4 71424511 71491444 -
n.a. Calcium-dependent lipid-binding family protein isoform protein; TAIR: AT1G48090.4 calcium-dependent lipid-binding family protein; Swiss-Prot: sp|Q709C8|VP13C_HUMAN Vacuolar protein sorting-associated protein 13C; TrEMBL-Plants: tr|A0A072V2R4|A0A072V2R4_MEDTR Calcium-dependent lipid-binding-like protein; Found in the gene: LotjaGi4g1v0334900 LjG1.1_chr4 71425799 71485584 -
n.a. Calcium-dependent lipid-binding family protein isoform protein; TAIR: AT1G48090.4 calcium-dependent lipid-binding family protein; Swiss-Prot: sp|Q709C8|VP13C_HUMAN Vacuolar protein sorting-associated protein 13C; TrEMBL-Plants: tr|A0A072V2R4|A0A072V2R4_MEDTR Calcium-dependent lipid-binding-like protein; Found in the gene: LotjaGi4g1v0334900 LjG1.1_chr4 71425799 71486084 -
n.a. Calcium-dependent lipid-binding family protein isoform protein; TAIR: AT1G48090.4 calcium-dependent lipid-binding family protein; Swiss-Prot: sp|Q54LB8|VP13A_DICDI Putative vacuolar protein sorting-associated protein 13A; TrEMBL-Plants: tr|A0A072V2R4|A0A072V2R4_MEDTR Calcium-dependent lipid-binding-like protein; Found in the gene: LotjaGi4g1v0334900 LjG1.1_chr4 71425799 71491118 -
n.a. Pleckstrin-like (PH) domain protein; TAIR: AT4G23895.1 Pleckstrin homology (PH) domain-containing protein; Swiss-Prot: sp|Q75ZQ2|URED_HALMA Urease accessory protein UreD; TrEMBL-Plants: tr|A0A0R0IFR9|A0A0R0IFR9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0435200 LjG1.1_chr4 80860216 80868865 -
n.a. Pleckstrin-like (PH) domain protein; TAIR: AT4G23895.1 Pleckstrin homology (PH) domain-containing protein; Swiss-Prot: sp|Q75ZQ2|URED_HALMA Urease accessory protein UreD; TrEMBL-Plants: tr|A0A0R0IFR9|A0A0R0IFR9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0435200 LjG1.1_chr4 80862164 80866130 -
n.a. GRAM domain protein/ABA-responsive-like protein; TAIR: AT5G08350.1 GRAM domain-containing protein / ABA-responsive protein-like protein; Swiss-Prot: sp|Q9FTA0|GEML4_ARATH GEM-like protein 4; TrEMBL-Plants: tr|I3SIE9|I3SIE9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0438500 LjG1.1_chr4 81166664 81168925 -
n.a. Adaptin ear-binding coat-associated protein 1; TAIR: AT1G03900.1 non-intrinsic ABC protein 4; Swiss-Prot: sp|Q681Q7|Y1390_ARATH Uncharacterized protein At1g03900; TrEMBL-Plants: tr|A0A072VLL1|A0A072VLL1_MEDTR Adaptin ear-binding coat-associated protein 1; Found in the gene: LotjaGi5g1v0157300 LjG1.1_chr5 40598284 40609579 -
n.a. Phospholipase D; TAIR: AT3G16785.1 phospholipase D P1; Swiss-Prot: sp|Q9LRZ5|PLDZ1_ARATH Phospholipase D zeta 1; TrEMBL-Plants: tr|V7BGF2|V7BGF2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0226900 LjG1.1_chr5 53411969 53428553 +
n.a. Kinase-like protein; TAIR: AT5G04510.1 3'-phosphoinositide-dependent protein kinase 1; Swiss-Prot: sp|Q9XF67|PDPK1_ARATH 3-phosphoinositide-dependent protein kinase 1; TrEMBL-Plants: tr|A0A0L9TFD6|A0A0L9TFD6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0265800 LjG1.1_chr5 57671518 57678985 -
n.a. Kinase-like protein; TAIR: AT3G10540.1 3-phosphoinositide-dependent protein kinase; Swiss-Prot: sp|Q9XF67|PDPK1_ARATH 3-phosphoinositide-dependent protein kinase 1; TrEMBL-Plants: tr|A0A0L9TFD6|A0A0L9TFD6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0265800 LjG1.1_chr5 57672261 57676354 -
n.a. Kinase-like protein; TAIR: AT3G10540.1 3-phosphoinositide-dependent protein kinase; Swiss-Prot: sp|Q9XF67|PDPK1_ARATH 3-phosphoinositide-dependent protein kinase 1; TrEMBL-Plants: tr|A0A0L9TFD6|A0A0L9TFD6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0265800 LjG1.1_chr5 57672261 57678438 -
n.a. Pleckstrin-like (PH) and lipid-binding START domain protein; TAIR: AT3G54800.1 Pleckstrin homology (PH) and lipid-binding START domains-containing protein; Swiss-Prot: sp|Q8VZF6|EDR2L_ARATH Protein ENHANCED DISEASE RESISTANCE 2-like; TrEMBL-Plants: tr|I1LD05|I1LD05_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0273900 LjG1.1_chr5 58724526 58732758 +
n.a. RAN BINDING protein 1; TAIR: AT5G58590.1 RAN binding protein 1; Swiss-Prot: sp|P92985|RBP1C_ARATH Ran-binding protein 1 homolog c; TrEMBL-Plants: tr|I1NH59|I1NH59_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0286500 LjG1.1_chr5 60315109 60319251 +
n.a. Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G42140.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr|V7BF38|V7BF38_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0293400 LjG1.1_chr5 61088752 61096822 -
n.a. GRAM domain protein/ABA-responsive-like protein; TAIR: AT5G08350.1 GRAM domain-containing protein / ABA-responsive protein-like protein; Swiss-Prot: sp|Q9FTA0|GEML4_ARATH GEM-like protein 4; TrEMBL-Plants: tr|B7FJD2|B7FJD2_MEDTR GRAM domain protein/ABA-responsive-like protein; Found in the gene: LotjaGi5g1v0353600 LjG1.1_chr5 66921034 66928263 -
n.a. GRAM domain protein/ABA-responsive-like protein; TAIR: AT5G08350.1 GRAM domain-containing protein / ABA-responsive protein-like protein; Swiss-Prot: sp|Q9FTA0|GEML4_ARATH GEM-like protein 4; TrEMBL-Plants: tr|B7FJD2|B7FJD2_MEDTR GRAM domain protein/ABA-responsive-like protein; Found in the gene: LotjaGi5g1v0353600 LjG1.1_chr5 66921036 66922441 -
n.a. GRAM domain protein/ABA-responsive-like protein; TAIR: AT5G23370.1 GRAM domain-containing protein / ABA-responsive protein-like protein; Swiss-Prot: sp|Q9FMW4|GEML8_ARATH Putative GEM-like protein 8; TrEMBL-Plants: tr|A0A072W2G8|A0A072W2G8_MEDTR GRAM domain protein/ABA-responsive-like protein; Found in the gene: LotjaGi5g1v0353700 LjG1.1_chr5 66930869 66933091 -
n.a. GRAM domain protein/ABA-responsive-like protein; TAIR: AT5G08350.1 GRAM domain-containing protein / ABA-responsive protein-like protein; Swiss-Prot: sp|Q9FTA0|GEML4_ARATH GEM-like protein 4; TrEMBL-Plants: tr|K7LM06|K7LM06_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0353700 LjG1.1_chr5 66930869 66936761 -
n.a. GRAM domain protein/ABA-responsive-like protein; TAIR: AT5G08350.1 GRAM domain-containing protein / ABA-responsive protein-like protein; Swiss-Prot: sp|Q9FTA0|GEML4_ARATH GEM-like protein 4; TrEMBL-Plants: tr|K7LM06|K7LM06_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0353700 LjG1.1_chr5 66934781 66936761 -
n.a. Regulator of chromosome condensation (RCC1) family protein; TAIR: AT4G14368.2 Regulator of chromosome condensation (RCC1) family protein; Swiss-Prot: sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr|G7I4N4|G7I4N4_MEDTR Chromosome condensation regulator RCC1 repeat protein; Found in the gene: LotjaGi6g1v0005200 LjG1.1_chr6 1030511 1037347 +
n.a. FACT complex subunit SPT16; TAIR: AT4G10710.1 global transcription factor C; Swiss-Prot: sp|O82491|SPT16_ARATH FACT complex subunit SPT16; TrEMBL-Plants: tr|A0A1J7H1L5|A0A1J7H1L5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0051400 LjG1.1_chr6 9211120 9216841 -
n.a. FACT complex subunit SPT16; TAIR: AT4G10710.1 global transcription factor C; Swiss-Prot: sp|O82491|SPT16_ARATH FACT complex subunit SPT16; TrEMBL-Plants: tr|A0A1J7H1L5|A0A1J7H1L5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0051400 LjG1.1_chr6 9211869 9215140 -
n.a. FACT complex subunit SPT16; TAIR: AT4G10710.1 global transcription factor C; Swiss-Prot: sp|O82491|SPT16_ARATH FACT complex subunit SPT16; TrEMBL-Plants: tr|A0A1J7H1L5|A0A1J7H1L5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0051400 LjG1.1_chr6 9211869 9215189 -
n.a. FACT complex subunit SPT16; TAIR: AT4G10710.1 global transcription factor C; Swiss-Prot: sp|O82491|SPT16_ARATH FACT complex subunit SPT16; TrEMBL-Plants: tr|A0A1J7IIX4|A0A1J7IIX4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0051500 LjG1.1_chr6 9240360 9243974 -
n.a. FACT complex subunit SPT16; TAIR: AT4G10710.1 global transcription factor C; Swiss-Prot: sp|O82491|SPT16_ARATH FACT complex subunit SPT16; TrEMBL-Plants: tr|A0A1J7IIX4|A0A1J7IIX4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0051500 LjG1.1_chr6 9240392 9245461 -
n.a. FACT complex subunit SPT16; TAIR: AT4G10710.1 global transcription factor C; Swiss-Prot: sp|O82491|SPT16_ARATH FACT complex subunit SPT16; TrEMBL-Plants: tr|A0A1J7IIX4|A0A1J7IIX4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0051500 LjG1.1_chr6 9240765 9243974 -
n.a. Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT1G65920.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2; TrEMBL-Plants: tr|A0A0S3S5P3|A0A0S3S5P3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0052200 LjG1.1_chr6 9323506 9332186 +
n.a. Pleckstrin homology domain-containing protein 1; TAIR: AT2G29700.1 pleckstrin homologue 1; Swiss-Prot: sp|Q9ST43|PH1_ARATH Pleckstrin homology domain-containing protein 1; TrEMBL-Plants: tr|I3SI15|I3SI15_MEDTR Pleckstrin-like (PH) domain protein; Found in the gene: LotjaGi6g1v0112700 LjG1.1_chr6 26848429 26848875 +
n.a. Pleckstrin-like (PH) domain protein; TAIR: AT2G30880.1 Pleckstrin homology (PH) domain-containing protein; Swiss-Prot: sp|Q5F4B2|SWP70_CHICK Switch-associated protein 70; TrEMBL-Plants: tr|I1JJ22|I1JJ22_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0175900 LjG1.1_chr6 46609113 46616541 +
n.a. Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr|I1N146|I1N146_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0181100 LjG1.1_chr6 47304519 47316040 +
n.a. Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr|I1N146|I1N146_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0181100 LjG1.1_chr6 47307429 47315531 +
n.a. Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr|I1N146|I1N146_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0181100 LjG1.1_chr6 47307430 47315531 +
n.a. Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr|I1N146|I1N146_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0181100 LjG1.1_chr6 47307658 47315531 +
n.a. Phospholipase D; TAIR: AT3G16785.1 phospholipase D P1; Swiss-Prot: sp|Q9LRZ5|PLDZ1_ARATH Phospholipase D zeta 1; TrEMBL-Plants: tr|I1MGP5|I1MGP5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0252900 LjG1.1_chr6 56520497 56531560 +
n.a. Phospholipase D; TAIR: AT3G16785.1 phospholipase D P1; Swiss-Prot: sp|Q9LRZ5|PLDZ1_ARATH Phospholipase D zeta 1; TrEMBL-Plants: tr|A0A0B2QY87|A0A0B2QY87_GLYSO Phospholipase D p1; Found in the gene: LotjaGi6g1v0252900 LjG1.1_chr6 56521716 56531128 +
n.a. Phospholipase D; TAIR: AT3G16785.1 phospholipase D P1; Swiss-Prot: sp|Q9LRZ5|PLDZ1_ARATH Phospholipase D zeta 1; TrEMBL-Plants: tr|A0A0B2QY87|A0A0B2QY87_GLYSO Phospholipase D p1; Found in the gene: LotjaGi6g1v0252900 LjG1.1_chr6 56522106 56531128 +
n.a. Serine/threonine-protein phosphatase 4 regulatory subunit 3; TAIR: AT3G06670.1 binding protein; Swiss-Prot: sp|Q5SP90|PP4R3_DANRE Serine/threonine-protein phosphatase 4 regulatory subunit 3; TrEMBL-Plants: tr|G7IG10|G7IG10_MEDTR Component of IIS longevity pathway SMK-1 domain protein; Found in the gene: LotjaGi6g1v0256800 LjG1.1_chr6 56966258 56982722 +
n.a. C2 and GRAM domain-containing protein; TAIR: AT1G03370.1 C2 calcium/lipid-binding and GRAM domain containing protein; Swiss-Prot: sp|Q9ZVT9|C2GR1_ARATH C2 and GRAM domain-containing protein At1g03370; TrEMBL-Plants: tr|A0A0B2S6D4|A0A0B2S6D4_GLYSO C2 and GRAM domain-containing protein; Found in the gene: LotjaGi6g1v0281500 LjG1.1_chr6 59787365 59794887 -
n.a. Dynamin, putative; TAIR: AT4G33650.1 dynamin-related protein 3A; Swiss-Prot: sp|Q8S944|DRP3A_ARATH Dynamin-related protein 3A; TrEMBL-Plants: tr|I1ME12|I1ME12_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0348900 LjG1.1_chr6 66157093 66167141 -