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The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.
We have found 378 results. Now displaying 4 of 8 with 50 rows per page. This search has taken 5.673s to perform.
Transcript | Name | Description | Chr | Start | End | Strand | Domain predictions | GO predictions |
---|---|---|---|---|---|---|---|---|
n.a. | Cullin family protein; TAIR: AT1G69670.1 cullin 3B; Swiss-Prot: sp|Q9C9L0|CUL3B_ARATH Cullin-3B; TrEMBL-Plants: tr|A0A0L9VNM3|A0A0L9VNM3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0258300 | LjG1.1_chr2 | 72503486 | 72507644 | + | – | ||
n.a. | Cullin, putative; TAIR: AT1G26830.1 cullin 3; Swiss-Prot: sp|Q9ZVH4|CUL3A_ARATH Cullin-3A; TrEMBL-Plants: tr|A0A0L9VNM3|A0A0L9VNM3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0258300 | LjG1.1_chr2 | 72505144 | 72507171 | + | – | ||
n.a. | Eukaryotic translation initiation factor 3 subunit M; TAIR: AT5G15610.2 Proteasome component (PCI) domain protein; Swiss-Prot: sp|Q54KZ8|EIF3M_DICDI Eukaryotic translation initiation factor 3 subunit M; TrEMBL-Plants: tr|A0A072U6R5|A0A072U6R5_MEDTR Eukaryotic translation initiation factor 3 subunit M; Found in the gene: LotjaGi2g1v0267200 | LjG1.1_chr2 | 73695236 | 73699738 | + | – | ||
n.a. | Homologous-pairing protein 2 like; TAIR: AT1G13330.1 Tat-binding protein 1(Tbp-1)-interacting protein (TBPIP); Swiss-Prot: sp|Q9FX64|HOP2_ARATH Homologous-pairing protein 2 homolog; TrEMBL-Plants: tr|A0A0L9UTJ7|A0A0L9UTJ7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0278700 | LjG1.1_chr2 | 75023700 | 75028674 | - | – | ||
n.a. | Cullin family protein; TAIR: AT1G26830.1 cullin 3; Swiss-Prot: sp|Q9ZVH4|CUL3A_ARATH Cullin-3A; TrEMBL-Plants: tr|I1KXS9|I1KXS9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0304900 | LjG1.1_chr2 | 77822304 | 77827923 | - | – | ||
n.a. | Cullin, putative; TAIR: AT1G26830.1 cullin 3; Swiss-Prot: sp|Q9ZVH4|CUL3A_ARATH Cullin-3A; TrEMBL-Plants: tr|A0A1J7HV59|A0A1J7HV59_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0304900 | LjG1.1_chr2 | 77823372 | 77825396 | - | – | ||
n.a. | Heat shock transcription factor family protein; TAIR: AT1G32330.1 heat shock transcription factor A1D; Swiss-Prot: sp|Q9LQM7|HFA1D_ARATH Heat stress transcription factor A-1d; TrEMBL-Plants: tr|G7KDN6|G7KDN6_MEDTR Heat shock transcription factor A3; Found in the gene: LotjaGi2g1v0335200 | LjG1.1_chr2 | 81120590 | 81125013 | + | – | ||
n.a. | Heat shock transcription factor family protein; TAIR: AT1G32330.1 heat shock transcription factor A1D; Swiss-Prot: sp|Q9LQM7|HFA1D_ARATH Heat stress transcription factor A-1d; TrEMBL-Plants: tr|G7KDN6|G7KDN6_MEDTR Heat shock transcription factor A3; Found in the gene: LotjaGi2g1v0335200 | LjG1.1_chr2 | 81120653 | 81124799 | + | – | ||
n.a. | Vacuolar protein sorting-associated protein 25; TAIR: AT4G19003.1 E2F/DP family winged-helix DNA-binding domain-containing protein; Swiss-Prot: sp|Q8VZC9|VPS25_ARATH Vacuolar protein sorting-associated protein 25; TrEMBL-Plants: tr|I3SXY8|I3SXY8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0338500 | LjG1.1_chr2 | 81544807 | 81548080 | - | – | ||
n.a. | 26S proteasome subunit, putative; TAIR: AT5G45620.1 Proteasome component (PCI) domain protein; Swiss-Prot: sp|Q8RWF0|PS13A_ARATH 26S proteasome non-ATPase regulatory subunit 13 homolog A; TrEMBL-Plants: tr|A0A1J7HWA1|A0A1J7HWA1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0339600 | LjG1.1_chr2 | 81654445 | 81659276 | - | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A072UMY5|A0A072UMY5_MEDTR Disease resistance protein (TIR-NBS-LRR class), putative; Found in the gene: LotjaGi2g1v0342000 | LjG1.1_chr2 | 81923338 | 81931098 | + | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A072UMY5|A0A072UMY5_MEDTR Disease resistance protein (TIR-NBS-LRR class), putative; Found in the gene: LotjaGi2g1v0342000 | LjG1.1_chr2 | 81923338 | 81931098 | + | – | ||
n.a. | La-related; TAIR: AT4G35890.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp|Q94K80|LRP1C_ARATH La-related protein 1C; TrEMBL-Plants: tr|K7K470|K7K470_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0378500 | LjG1.1_chr2 | 87547668 | 87553498 | + | – | ||
n.a. | Histone H1; TAIR: AT2G18050.1 histone H1-3; Swiss-Prot: sp|P40267|H1_SOLPN Histone H1; TrEMBL-Plants: tr|I3S1P0|I3S1P0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0382800 | LjG1.1_chr2 | 87920701 | 87922013 | + | – | ||
n.a. | Heat shock transcription factor; TAIR: AT4G36990.1 heat shock factor 4; Swiss-Prot: sp|P22335|HSF24_SOLPE Heat shock factor protein HSF24; TrEMBL-Plants: tr|Q43457|Q43457_SOYBN Heat shock transcription factor 34; Found in the gene: LotjaGi2g1v0400800 | LjG1.1_chr2 | 89825571 | 89828125 | - | – | ||
n.a. | MYB transcription factor; TAIR: AT5G67580.1 Homeodomain-like/winged-helix DNA-binding family protein; Swiss-Prot: sp|Q9FJW5|TRB2_ARATH Telomere repeat-binding factor 2; TrEMBL-Plants: tr|V7CHF9|V7CHF9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0410300 | LjG1.1_chr2 | 90714484 | 90719715 | - | – | ||
n.a. | MYB transcription factor; TAIR: AT5G67580.1 Homeodomain-like/winged-helix DNA-binding family protein; Swiss-Prot: sp|Q9FJW5|TRB2_ARATH Telomere repeat-binding factor 2; TrEMBL-Plants: tr|V7CHF9|V7CHF9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0410300 | LjG1.1_chr2 | 90714664 | 90719315 | - | – | ||
n.a. | Heat shock transcription factor; TAIR: AT4G11660.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp|Q9T0D3|HFB2B_ARATH Heat stress transcription factor B-2b; TrEMBL-Plants: tr|A0A0S3T5M2|A0A0S3T5M2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0432300 | LjG1.1_chr2 | 92921887 | 92926352 | - | – | ||
n.a. | Telomere repeat-binding factor 4; TAIR: AT1G72740.2 Homeodomain-like/winged-helix DNA-binding family protein; Swiss-Prot: sp|Q6WLH4|SMH3_MAIZE Single myb histone 3; TrEMBL-Plants: tr|I1KG92|I1KG92_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0028200 | LjG1.1_chr3 | 3072170 | 3082477 | - | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7IM52|G7IM52_MEDTR Disease resistance protein (TIR-NBS-LRR class), putative; Found in the gene: LotjaGi3g1v0045400 | LjG1.1_chr3 | 4841988 | 4851503 | - | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7IM52|G7IM52_MEDTR Disease resistance protein (TIR-NBS-LRR class), putative; Found in the gene: LotjaGi3g1v0045400 | LjG1.1_chr3 | 4843698 | 4851450 | - | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A0S3R8N0|A0A0S3R8N0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0057500 | LjG1.1_chr3 | 5968145 | 5975816 | - | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A151RE93|A0A151RE93_CAJCA TMV resistance protein N; Found in the gene: LotjaGi3g1v0057700 | LjG1.1_chr3 | 5979025 | 6001958 | - | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G36930.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7LF48|G7LF48_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0090300 | LjG1.1_chr3 | 10225887 | 10229468 | + | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G36930.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7LF48|G7LF48_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0090400 | LjG1.1_chr3 | 10231128 | 10238442 | + | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G36930.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7LF48|G7LF48_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0090400 | LjG1.1_chr3 | 10231142 | 10238472 | + | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G36930.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7LF48|G7LF48_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0100800 | LjG1.1_chr3 | 12505846 | 12511199 | - | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G36930.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|K7KYE4|K7KYE4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0105200 | LjG1.1_chr3 | 13059397 | 13067551 | - | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G36930.2 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|K7KYE4|K7KYE4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0105200 | LjG1.1_chr3 | 13059543 | 13067551 | - | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G36930.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|K7KYE4|K7KYE4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0105200 | LjG1.1_chr3 | 13059543 | 13067551 | - | – | ||
n.a. | 40S ribosomal protein S19; TAIR: AT5G61170.1 Ribosomal protein S19e family protein; Swiss-Prot: sp|Q9FNP8|RS193_ARATH 40S ribosomal protein S19-3; TrEMBL-Plants: tr|I3SQF0|I3SQF0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0107200 | LjG1.1_chr3 | 13230986 | 13233772 | + | – | ||
n.a. | 40S ribosomal protein S19; TAIR: AT5G61170.1 Ribosomal protein S19e family protein; Swiss-Prot: sp|Q9FNP8|RS193_ARATH 40S ribosomal protein S19-3; TrEMBL-Plants: tr|I3SQF0|I3SQF0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0107200 | LjG1.1_chr3 | 13231193 | 13232486 | + | – | ||
n.a. | 40S ribosomal protein S19; TAIR: AT3G02080.1 Ribosomal protein S19e family protein; Swiss-Prot: sp|Q9SGA6|RS191_ARATH 40S ribosomal protein S19-1; TrEMBL-Plants: tr|I3SQF0|I3SQF0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0107200 | LjG1.1_chr3 | 13232048 | 13232862 | + | – | ||
n.a. | Sister chromatid cohesion 1 protein; TAIR: AT3G59550.1 Rad21/Rec8-like family protein; Swiss-Prot: sp|Q9FQ19|SCC13_ARATH Sister chromatid cohesion 1 protein 3; TrEMBL-Plants: tr|A0A1J7GHV5|A0A1J7GHV5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0125000 | LjG1.1_chr3 | 15276635 | 15283717 | + | – | ||
n.a. | U5 small nuclear ribonucleoprotein helicase; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp|Q9SYP1|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr|A0A0L9UIS3|A0A0L9UIS3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0141500 | LjG1.1_chr3 | 18748763 | 18757429 | + | – | ||
n.a. | U5 small nuclear ribonucleoprotein helicase; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp|Q9SYP1|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr|A0A0L9UIS3|A0A0L9UIS3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0141500 | LjG1.1_chr3 | 18748967 | 18755959 | + | – | ||
n.a. | ATP-dependent helicase hrq1; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp|Q9SYP1|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr|G7IJ55|G7IJ55_MEDTR U5 small nuclear ribonucleoprotein 200 kDa helicase; Found in the gene: LotjaGi3g1v0141500 | LjG1.1_chr3 | 18748967 | 18756137 | + | – | ||
n.a. | ATP-dependent RNA helicase; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp|Q9SYP1|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr|A0A0L9UIS3|A0A0L9UIS3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0141500 | LjG1.1_chr3 | 18748997 | 18755959 | + | – | ||
n.a. | U5 small nuclear ribonucleoprotein helicase; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp|Q9SYP1|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr|G7IJ55|G7IJ55_MEDTR U5 small nuclear ribonucleoprotein 200 kDa helicase; Found in the gene: LotjaGi3g1v0141500 | LjG1.1_chr3 | 18754139 | 18755959 | + | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G36930.2 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A072U1J0|A0A072U1J0_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0145500 | LjG1.1_chr3 | 19354679 | 19380477 | - | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G36930.2 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A072U1J0|A0A072U1J0_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0145500 | LjG1.1_chr3 | 19357287 | 19380442 | - | – | ||
n.a. | Transcription factor; TAIR: AT5G22220.2 E2F transcription factor 1; Swiss-Prot: sp|Q9FV71|E2FB_ARATH Transcription factor E2FB; TrEMBL-Plants: tr|K7LQ43|K7LQ43_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0181200 | LjG1.1_chr3 | 25229354 | 25236830 | - | – | ||
n.a. | Caffeic O-methyltransferase; TAIR: AT5G54160.1 O-methyltransferase 1; Swiss-Prot: sp|Q00763|COMT1_POPTM Caffeic acid 3-O-methyltransferase 1; TrEMBL-Plants: tr|I1NCR8|I1NCR8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0187000 | LjG1.1_chr3 | 26306482 | 26313385 | + | – | ||
n.a. | Caffeic O-methyltransferase; TAIR: AT5G54160.1 O-methyltransferase 1; Swiss-Prot: sp|Q00763|COMT1_POPTM Caffeic acid 3-O-methyltransferase 1; TrEMBL-Plants: tr|C6TMQ9|C6TMQ9_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0187000 | LjG1.1_chr3 | 26306482 | 26313385 | + | – | ||
n.a. | Caffeic O-methyltransferase; TAIR: AT5G54160.1 O-methyltransferase 1; Swiss-Prot: sp|Q00763|COMT1_POPTM Caffeic acid 3-O-methyltransferase 1; TrEMBL-Plants: tr|C6TMQ9|C6TMQ9_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0187000 | LjG1.1_chr3 | 26306560 | 26312681 | + | – | ||
n.a. | Caffeic O-methyltransferase; TAIR: AT5G54160.1 O-methyltransferase 1; Swiss-Prot: sp|Q00763|COMT1_POPTM Caffeic acid 3-O-methyltransferase 1; TrEMBL-Plants: tr|I1NCR8|I1NCR8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0187000 | LjG1.1_chr3 | 26306595 | 26312889 | + | – | ||
n.a. | Caffeic O-methyltransferase; TAIR: AT5G54160.1 O-methyltransferase 1; Swiss-Prot: sp|Q00763|COMT1_POPTM Caffeic acid 3-O-methyltransferase 1; TrEMBL-Plants: tr|C6TMQ9|C6TMQ9_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0187000 | LjG1.1_chr3 | 26306595 | 26312889 | + | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G36930.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7L5T5|G7L5T5_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0190100 | LjG1.1_chr3 | 27364087 | 27379474 | - | – | ||
n.a. | Methionine aminopeptidase 2; TAIR: AT3G51800.3 metallopeptidase M24 family protein; Swiss-Prot: sp|M1CZC0|EBP1_SOLTU ERBB-3 BINDING PROTEIN 1; TrEMBL-Plants: tr|A0EVX1|A0EVX1_9FABA EBP1; Found in the gene: LotjaGi3g1v0194700 | LjG1.1_chr3 | 28294998 | 28301896 | + | – | ||
n.a. | Methionine aminopeptidase 2; TAIR: AT3G51800.3 metallopeptidase M24 family protein; Swiss-Prot: sp|M1CZC0|EBP1_SOLTU ERBB-3 BINDING PROTEIN 1; TrEMBL-Plants: tr|A0EVX1|A0EVX1_9FABA EBP1; Found in the gene: LotjaGi3g1v0194700 | LjG1.1_chr3 | 28295466 | 28301245 | + | – |