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The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.
We have found 378 results. Now displaying 7 of 8 with 50 rows per page. This search has taken 5.576s to perform.
Transcript | Name | Description | Chr | Start | End | Strand | Domain predictions | GO predictions |
---|---|---|---|---|---|---|---|---|
n.a. | 26S proteasome non-ATPase regulatory subunit; TAIR: AT5G09900.2 26S proteasome regulatory subunit, putative (RPN5); Swiss-Prot: sp|Q9FIB6|PS12A_ARATH 26S proteasome non-ATPase regulatory subunit 12 homolog A; TrEMBL-Plants: tr|V7CNL2|V7CNL2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0405800 | LjG1.1_chr4 | 78210335 | 78215181 | + | – | ||
n.a. | 26S proteasome non-ATPase regulatory subunit; TAIR: AT5G09900.2 26S proteasome regulatory subunit, putative (RPN5); Swiss-Prot: sp|Q9FIB6|PS12A_ARATH 26S proteasome non-ATPase regulatory subunit 12 homolog A; TrEMBL-Plants: tr|I1K4U3|I1K4U3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0405800 | LjG1.1_chr4 | 78210349 | 78215181 | + | – | ||
n.a. | 26S proteasome non-ATPase regulatory subunit 12; TAIR: AT5G09900.2 26S proteasome regulatory subunit, putative (RPN5); Swiss-Prot: sp|Q9FIB6|PS12A_ARATH 26S proteasome non-ATPase regulatory subunit 12 homolog A; TrEMBL-Plants: tr|I1K4U3|I1K4U3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0405800 | LjG1.1_chr4 | 78210427 | 78215181 | + | – | ||
n.a. | 26S proteasome non-ATPase regulatory subunit; TAIR: AT5G09900.2 26S proteasome regulatory subunit, putative (RPN5); Swiss-Prot: sp|Q9FIB6|PS12A_ARATH 26S proteasome non-ATPase regulatory subunit 12 homolog A; TrEMBL-Plants: tr|I1K4U3|I1K4U3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0405800 | LjG1.1_chr4 | 78210605 | 78215181 | + | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G45060.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q9SCX7|RPS4R_ARATH Inactive disease resistance protein RPS4; TrEMBL-Plants: tr|A0A151T389|A0A151T389_CAJCA TMV resistance protein N; Found in the gene: LotjaGi4g1v0453600_LC | LjG1.1_chr4 | 82559302 | 82564622 | + | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G45060.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q9SCX7|RPS4R_ARATH Inactive disease resistance protein RPS4; TrEMBL-Plants: tr|A0A151T389|A0A151T389_CAJCA TMV resistance protein N; Found in the gene: LotjaGi4g1v0453600_LC | LjG1.1_chr4 | 82559412 | 82564015 | + | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G36930.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A151T389|A0A151T389_CAJCA TMV resistance protein N; Found in the gene: LotjaGi4g1v0453600_LC | LjG1.1_chr4 | 82559428 | 82563737 | + | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A151T389|A0A151T389_CAJCA TMV resistance protein N; Found in the gene: LotjaGi4g1v0453700 | LjG1.1_chr4 | 82566908 | 82572463 | + | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|V7CQQ2|V7CQQ2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0453900 | LjG1.1_chr4 | 82585762 | 82590834 | - | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A151T389|A0A151T389_CAJCA TMV resistance protein N; Found in the gene: LotjaGi4g1v0453900 | LjG1.1_chr4 | 82585774 | 82590886 | - | – | ||
n.a. | Heat shock transcription factor; TAIR: AT1G67970.1 heat shock transcription factor A8; Swiss-Prot: sp|Q9S7U5|HSFA8_ARATH Heat stress transcription factor A-8; TrEMBL-Plants: tr|I3SJN5|I3SJN5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0458500 | LjG1.1_chr4 | 82946789 | 82949918 | + | – | ||
n.a. | Histone H1; TAIR: AT3G18035.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp|Q9FYS5|HMGYA_MAIZE HMG-Y-related protein A; TrEMBL-Plants: tr|Q93YH8|Q93YH8_SOYBN HMG I/Y like protein; Found in the gene: LotjaGi4g1v0463300 | LjG1.1_chr4 | 83331441 | 83334236 | + | – | ||
n.a. | La-related; TAIR: AT4G35890.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp|Q94K80|LRP1C_ARATH La-related protein 1C; TrEMBL-Plants: tr|I1MC18|I1MC18_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0003800 | LjG1.1_chr5 | 1023688 | 1028705 | - | – | ||
n.a. | 26S proteasome non-ATPase regulatory subunit; TAIR: AT4G24820.1 26S proteasome regulatory subunit Rpn7; Swiss-Prot: sp|Q93Y35|PSMD6_ARATH 26S proteasome non-ATPase regulatory subunit 6 homolog; TrEMBL-Plants: tr|V7CBH3|V7CBH3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0017400 | LjG1.1_chr5 | 3460599 | 3465306 | - | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A072UMY5|A0A072UMY5_MEDTR Disease resistance protein (TIR-NBS-LRR class), putative; Found in the gene: LotjaGi5g1v0018400 | LjG1.1_chr5 | 3554554 | 3567720 | + | – | ||
n.a. | Replication protein A 32 kDa subunit-like protein; TAIR: AT2G24490.1 replicon protein A2; Swiss-Prot: sp|Q9ZQ19|RFA2A_ARATH Replication protein A 32 kDa subunit A; TrEMBL-Plants: tr|A0A0L9V123|A0A0L9V123_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0065200 | LjG1.1_chr5 | 10895351 | 10899409 | - | – | ||
n.a. | Heat shock transcription factor family protein; TAIR: AT5G03720.1 heat shock transcription factor A3; Swiss-Prot: sp|Q8GYY1|HSFA3_ARATH Heat stress transcription factor A-3; TrEMBL-Plants: tr|A0A072VKE1|A0A072VKE1_MEDTR Heat shock transcription factor A3; Found in the gene: LotjaGi5g1v0091400 | LjG1.1_chr5 | 15976538 | 15979381 | + | – | ||
n.a. | Transcription factor; TAIR: AT2G36010.1 E2F transcription factor 3; Swiss-Prot: sp|Q9FNY0|E2FA_ARATH Transcription factor E2FA; TrEMBL-Plants: tr|V7BL69|V7BL69_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0102600 | LjG1.1_chr5 | 18569475 | 18574349 | - | – | ||
n.a. | Eukaryotic translation initiation factor 3 subunit E; TAIR: AT3G57290.1 eukaryotic translation initiation factor 3E; Swiss-Prot: sp|Q9C5Z3|EIF3E_ARATH Eukaryotic translation initiation factor 3 subunit E; TrEMBL-Plants: tr|V7BI41|V7BI41_PHAVU Eukaryotic translation initiation factor 3 subunit E; Found in the gene: LotjaGi5g1v0135400 | LjG1.1_chr5 | 32092547 | 32096523 | - | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT4G12010.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A072VIA7|A0A072VIA7_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi5g1v0135800 | LjG1.1_chr5 | 32189425 | 32198473 | + | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT4G12010.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A072VIA7|A0A072VIA7_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi5g1v0135800 | LjG1.1_chr5 | 32189449 | 32198451 | + | – | ||
n.a. | Heat shock transcription factor; TAIR: AT3G22830.1 heat shock transcription factor A6B; Swiss-Prot: sp|Q9LUH8|HFA6B_ARATH Heat stress transcription factor A-6b; TrEMBL-Plants: tr|A0A0B2P8E5|A0A0B2P8E5_GLYSO Heat stress transcription factor A-6b; Found in the gene: LotjaGi5g1v0171400 | LjG1.1_chr5 | 43992078 | 44010264 | + | – | ||
n.a. | Heat shock transcription factor; TAIR: AT3G22830.1 heat shock transcription factor A6B; Swiss-Prot: sp|Q9LUH8|HFA6B_ARATH Heat stress transcription factor A-6b; TrEMBL-Plants: tr|A0A0B2P8E5|A0A0B2P8E5_GLYSO Heat stress transcription factor A-6b; Found in the gene: LotjaGi5g1v0171400 | LjG1.1_chr5 | 44006388 | 44009700 | + | – | ||
n.a. | Heat shock transcription factor; TAIR: AT3G22830.1 heat shock transcription factor A6B; Swiss-Prot: sp|Q9LUH8|HFA6B_ARATH Heat stress transcription factor A-6b; TrEMBL-Plants: tr|A0A0B2P8E5|A0A0B2P8E5_GLYSO Heat stress transcription factor A-6b; Found in the gene: LotjaGi5g1v0171400 | LjG1.1_chr5 | 44006778 | 44010264 | + | – | ||
n.a. | Histone H1; TAIR: AT2G30620.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp|P26569|H12_ARATH Histone H1.2; TrEMBL-Plants: tr|D7LC70|D7LC70_ARALL Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0176500_LC | LjG1.1_chr5 | 45023004 | 45024144 | + | – | ||
n.a. | CDT1-like protein a, chloroplastic; TAIR: AT2G31270.1 CDT1-like protein A; Swiss-Prot: sp|Q9SJW9|CDT1A_ARATH CDT1-like protein a, chloroplastic; TrEMBL-Plants: tr|A0A072VLQ6|A0A072VLQ6_MEDTR DNA replication factor CDT1-like protein; Found in the gene: LotjaGi5g1v0179700 | LjG1.1_chr5 | 45740307 | 45744225 | - | – | ||
n.a. | O-methyltransferase, putative; TAIR: AT4G35160.1 O-methyltransferase family protein; Swiss-Prot: sp|O22309|7OMT9_MEDSA Isoflavone-7-O-methyltransferase 9; TrEMBL-Plants: tr|I3SDH2|I3SDH2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0196200 | LjG1.1_chr5 | 49187966 | 49190821 | + | – | ||
n.a. | Histone H1; TAIR: AT2G30620.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp|P26569|H12_ARATH Histone H1.2; TrEMBL-Plants: tr|I1LBM9|I1LBM9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0211600_LC | LjG1.1_chr5 | 51608579 | 51609659 | - | – | ||
n.a. | Telomere repeat-binding factor 4; TAIR: AT1G72740.2 Homeodomain-like/winged-helix DNA-binding family protein; Swiss-Prot: sp|F4IEY4|TRB5_ARATH Telomere repeat-binding factor 5; TrEMBL-Plants: tr|V7APC8|V7APC8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0229400 | LjG1.1_chr5 | 53655697 | 53659859 | - | – | ||
n.a. | O-methyltransferase; TAIR: AT5G54160.1 O-methyltransferase 1; Swiss-Prot: sp|P93324|CHOMT_MEDSA Isoliquiritigenin 2'-O-methyltransferase; TrEMBL-Plants: tr|I1LD68|I1LD68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0279300 | LjG1.1_chr5 | 59461500 | 59463221 | + | – | ||
n.a. | Caffeic acid O-methyltransferase; TAIR: AT5G54160.1 O-methyltransferase 1; Swiss-Prot: sp|P93324|CHOMT_MEDSA Isoliquiritigenin 2'-O-methyltransferase; TrEMBL-Plants: tr|I1LD68|I1LD68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0279400 | LjG1.1_chr5 | 59465011 | 59467874 | + | – | ||
n.a. | O-methyltransferase; TAIR: AT5G54160.1 O-methyltransferase 1; Swiss-Prot: sp|P93324|CHOMT_MEDSA Isoliquiritigenin 2'-O-methyltransferase; TrEMBL-Plants: tr|I1LD68|I1LD68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0279400 | LjG1.1_chr5 | 59465011 | 59467874 | + | – | ||
n.a. | Eukaryotic translation initiation factor 3 subunit C; TAIR: AT3G56150.1 eukaryotic translation initiation factor 3C; Swiss-Prot: sp|Q9XHM1|EIF3C_MEDTR Eukaryotic translation initiation factor 3 subunit C; TrEMBL-Plants: tr|A0A0L9U9H6|A0A0L9U9H6_PHAAN Eukaryotic translation initiation factor 3 subunit C; Found in the gene: LotjaGi5g1v0284500 | LjG1.1_chr5 | 60112015 | 60118612 | + | – | ||
n.a. | Eukaryotic translation initiation factor 3 subunit C; TAIR: AT3G56150.1 eukaryotic translation initiation factor 3C; Swiss-Prot: sp|Q9XHM1|EIF3C_MEDTR Eukaryotic translation initiation factor 3 subunit C; TrEMBL-Plants: tr|A0A0L9U9H6|A0A0L9U9H6_PHAAN Eukaryotic translation initiation factor 3 subunit C; Found in the gene: LotjaGi5g1v0284500 | LjG1.1_chr5 | 60112299 | 60118117 | + | – | ||
n.a. | Eukaryotic translation initiation factor 3 subunit C; TAIR: AT3G56150.1 eukaryotic translation initiation factor 3C; Swiss-Prot: sp|Q9XHM1|EIF3C_MEDTR Eukaryotic translation initiation factor 3 subunit C; TrEMBL-Plants: tr|I1JQD9|I1JQD9_SOYBN Eukaryotic translation initiation factor 3 subunit C; Found in the gene: LotjaGi5g1v0284500 | LjG1.1_chr5 | 60112616 | 60118118 | + | – | ||
n.a. | Heat shock transcription factor; TAIR: AT3G22830.1 heat shock transcription factor A6B; Swiss-Prot: sp|Q9LUH8|HFA6B_ARATH Heat stress transcription factor A-6b; TrEMBL-Plants: tr|I1NGK0|I1NGK0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0310300 | LjG1.1_chr5 | 62843551 | 62846893 | - | – | ||
n.a. | ATP-dependent RNA helicase; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp|Q9SYP1|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr|A0A0B2R3L5|A0A0B2R3L5_GLYSO U5 small nuclear ribonucleoprotein 200 kDa helicase; Found in the gene: LotjaGi5g1v0347000_LC | LjG1.1_chr5 | 66329406 | 66333393 | + | – | ||
n.a. | O-methyltransferase, putative; TAIR: AT4G35160.1 O-methyltransferase family protein; Swiss-Prot: sp|Q6WUC1|6OMT_PAPSO (RS)-norcoclaurine 6-O-methyltransferase; TrEMBL-Plants: tr|I3TA83|I3TA83_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0036500 | LjG1.1_chr6 | 7262274 | 7265700 | - | – | ||
n.a. | ATP-dependent RNA helicase DeaD; TAIR: AT1G31360.1 RECQ helicase L2; Swiss-Prot: sp|Q9CL21|RECQ_PASMU ATP-dependent DNA helicase RecQ; TrEMBL-Plants: tr|A0A0B2QEX8|A0A0B2QEX8_GLYSO Werner syndrome ATP-dependent helicase like; Found in the gene: LotjaGi6g1v0046900 | LjG1.1_chr6 | 8640138 | 8651823 | + | – | ||
n.a. | HMG-Y-related protein A; TAIR: AT1G14900.1 high mobility group A; Swiss-Prot: sp|Q00423|HMGYA_SOYBN HMG-Y-related protein A; TrEMBL-Plants: tr|A0A1J7HLR9|A0A1J7HLR9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0056500 | LjG1.1_chr6 | 10249110 | 10250886 | - | – | ||
n.a. | HMG-Y-related A; TAIR: AT1G14900.1 high mobility group A; Swiss-Prot: sp|Q00423|HMGYA_SOYBN HMG-Y-related protein A; TrEMBL-Plants: tr|G7J9E3|G7J9E3_MEDTR Linker histone H1 and h5 family protein; Found in the gene: LotjaGi6g1v0056600 | LjG1.1_chr6 | 10263277 | 10265350 | - | – | ||
n.a. | Methionine aminopeptidase 2; TAIR: AT3G59990.1 methionine aminopeptidase 2B; Swiss-Prot: sp|Q56Y85|MAP22_ARATH Methionine aminopeptidase 2B; TrEMBL-Plants: tr|A0A151RPI8|A0A151RPI8_CAJCA Methionine aminopeptidase 2; Found in the gene: LotjaGi6g1v0067300 | LjG1.1_chr6 | 12772422 | 12782415 | + | – | ||
n.a. | Methionine aminopeptidase 2; TAIR: AT3G59990.1 methionine aminopeptidase 2B; Swiss-Prot: sp|Q56Y85|MAP22_ARATH Methionine aminopeptidase 2B; TrEMBL-Plants: tr|A0A151RPI8|A0A151RPI8_CAJCA Methionine aminopeptidase 2; Found in the gene: LotjaGi6g1v0067300 | LjG1.1_chr6 | 12772588 | 12781633 | + | – | ||
n.a. | Methionine aminopeptidase 2; TAIR: AT3G59990.1 methionine aminopeptidase 2B; Swiss-Prot: sp|Q56Y85|MAP22_ARATH Methionine aminopeptidase 2B; TrEMBL-Plants: tr|K7MVR5|K7MVR5_SOYBN Methionine aminopeptidase 2; Found in the gene: LotjaGi6g1v0067300 | LjG1.1_chr6 | 12774360 | 12781220 | + | – | ||
n.a. | Methionine aminopeptidase 2; TAIR: AT3G59990.1 methionine aminopeptidase 2B; Swiss-Prot: sp|Q56Y85|MAP22_ARATH Methionine aminopeptidase 2B; TrEMBL-Plants: tr|K7MVR5|K7MVR5_SOYBN Methionine aminopeptidase 2; Found in the gene: LotjaGi6g1v0067300 | LjG1.1_chr6 | 12774377 | 12781220 | + | – | ||
n.a. | Methionine aminopeptidase 2; TAIR: AT3G59990.1 methionine aminopeptidase 2B; Swiss-Prot: sp|Q56Y85|MAP22_ARATH Methionine aminopeptidase 2B; TrEMBL-Plants: tr|K7MVR5|K7MVR5_SOYBN Methionine aminopeptidase 2; Found in the gene: LotjaGi6g1v0067300 | LjG1.1_chr6 | 12774380 | 12781220 | + | – | ||
n.a. | Methionine aminopeptidase 2; TAIR: AT3G59990.1 methionine aminopeptidase 2B; Swiss-Prot: sp|Q56Y85|MAP22_ARATH Methionine aminopeptidase 2B; TrEMBL-Plants: tr|K7MVR5|K7MVR5_SOYBN Methionine aminopeptidase 2; Found in the gene: LotjaGi6g1v0067300 | LjG1.1_chr6 | 12774386 | 12781220 | + | – | ||
n.a. | Methionine aminopeptidase 2; TAIR: AT3G59990.1 methionine aminopeptidase 2B; Swiss-Prot: sp|Q56Y85|MAP22_ARATH Methionine aminopeptidase 2B; TrEMBL-Plants: tr|K7MVR5|K7MVR5_SOYBN Methionine aminopeptidase 2; Found in the gene: LotjaGi6g1v0067300 | LjG1.1_chr6 | 12775535 | 12781220 | + | – | ||
n.a. | Methionine aminopeptidase 2; TAIR: AT3G59990.1 methionine aminopeptidase 2B; Swiss-Prot: sp|Q56Y85|MAP22_ARATH Methionine aminopeptidase 2B; TrEMBL-Plants: tr|K7MVR5|K7MVR5_SOYBN Methionine aminopeptidase 2; Found in the gene: LotjaGi6g1v0067300 | LjG1.1_chr6 | 12776038 | 12781220 | + | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7K9Q6|G7K9Q6_MEDTR Disease resistance protein; Found in the gene: LotjaGi6g1v0105100 | LjG1.1_chr6 | 23132913 | 23136185 | + | – |