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KNOX1 domain
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Homeobox protein knotted-1-like 2-like [Glycine max] gi|388556558|ref|NP_001253999.1| | 24 | ||
| – | PREDICTED: homeobox protein knotted-1-like 1-like isoform 1 [Glycine max] gi|356535014|ref|XP_003536044.1| | 24 | ||
| – | PREDICTED: homeobox protein knotted-1-like 6-like [Cicer arietinum] gi|502124921|ref|XP_004498724.1| | 7 | ||
| – | PREDICTED: homeobox protein knotted-1-like LET12-like isoform X2 [Cicer arietinum] gi|502167120|ref|XP_004514061.1| | 22 | ||
| – | PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max] gi|356562896|ref|XP_003549704.1| | 22 | ||
| – | PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max] gi|356507510|ref|XP_003522507.1| | 22 | ||
| – | Fused compound leaf 1 [Lotus japonicus] gi|357640304|gb|AET87101.1| | 8 | ||
| – | Knotted-1 homeobox protein [Caragana korshinskii] gi|480328047|gb|AGJ83725.1| | 18 | ||
| – | PREDICTED: homeobox protein knotted-1-like 7-like [Glycine max] gi|356495645|ref|XP_003516685.1| | 19 | ||
| – | PREDICTED: homeobox protein SBH1-like isoform 1 [Glycine max] gi|356554468|ref|XP_003545568.1| | 23 | ||
| – | KNT1 [Glycine max] gi|351734506|ref|NP_001237352.1| | 23 | ||
| – | PREDICTED: homeobox protein knotted-1-like LET12-like isoform X1 [Cicer arietinum] gi|502167116|ref|XP_004514060.1| | 22 | ||
| – | Knox class 1 protein [Pisum sativum] gi|3426304|gb|AAC32262.1| | 23 | ||
| – | Homeobox protein knotted-1, putative; TAIR: AT1G62360.1 KNOX/ELK homeobox transcription factor; Swiss-Prot: sp|P46608|HSBH1_SOYBN Homeobox protein SBH1; TrEMBL-Plants: tr|V7B6U2|V7B6U2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0065200 | 23 | ||
| – | Homeobox protein knotted-1, putative; TAIR: AT1G62360.1 KNOX/ELK homeobox transcription factor; Swiss-Prot: sp|P46608|HSBH1_SOYBN Homeobox protein SBH1; TrEMBL-Plants: tr|A0A0S3RK69|A0A0S3RK69_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0065200 | 23 | ||
| – | Homeobox protein; TAIR: AT1G62360.1 KNOX/ELK homeobox transcription factor; Swiss-Prot: sp|P46608|HSBH1_SOYBN Homeobox protein SBH1; TrEMBL-Plants: tr|K7KB19|K7KB19_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0065200 | 19 | ||
| – | Homeobox protein knotted-1, putative; TAIR: AT5G25220.2 homeobox protein knotted-1-like 3; Swiss-Prot: sp|O04136|KNAP3_MALDO Homeobox protein knotted-1-like 3; TrEMBL-Plants: tr|V7ATS5|V7ATS5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0380300 | 22 | ||
| – | Homeobox protein knotted-1-like 1; TAIR: AT1G14760.2 KNOX meinox protein; Swiss-Prot: sp|Q84JS6|KNAT6_ARATH Homeobox protein knotted-1-like 6; TrEMBL-Plants: tr|G9BXE7|G9BXE7_LOTJA Fused compound leaf 1; Found in the gene: LotjaGi2g1v0192700 | 10 | ||
| – | Homeobox 1; TAIR: AT1G23380.1 homeobox protein knotted-1-like 6; Swiss-Prot: sp|Q84JS6|KNAT6_ARATH Homeobox protein knotted-1-like 6; TrEMBL-Plants: tr|R9R650|R9R650_9FABA Knotted-1 homeobox protein; Found in the gene: LotjaGi2g1v0322900 | 24 | ||
| – | Homeobox 1; TAIR: AT1G23380.1 homeobox protein knotted-1-like 6; Swiss-Prot: sp|Q84JS6|KNAT6_ARATH Homeobox protein knotted-1-like 6; TrEMBL-Plants: tr|G7K060|G7K060_MEDTR Homeobox knotted-like protein; Found in the gene: LotjaGi2g1v0322900 | 24 | ||
| – | Homeobox protein knotted-1, putative; TAIR: AT1G62990.1 homeobox knotted-like protein; Swiss-Prot: sp|Q9FPQ8|KNAT7_ARATH Homeobox protein knotted-1-like 7; TrEMBL-Plants: tr|A0A0L9UPV4|A0A0L9UPV4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0430100 | 19 | ||
| – | Homeobox protein knotted-1, putative; TAIR: AT1G62990.1 homeobox knotted-like protein; Swiss-Prot: sp|Q9FPQ8|KNAT7_ARATH Homeobox protein knotted-1-like 7; TrEMBL-Plants: tr|A0A0L9UPV4|A0A0L9UPV4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0430100 | 19 | ||
| – | Homeobox-1; TAIR: AT1G62360.1 KNOX/ELK homeobox transcription factor; Swiss-Prot: sp|P46608|HSBH1_SOYBN Homeobox protein SBH1; TrEMBL-Plants: tr|A0A151SU49|A0A151SU49_CAJCA Homeobox protein SBH1; Found in the gene: LotjaGi4g1v0010900 | 23 | ||
| – | Homeobox protein knotted-1, putative; TAIR: AT5G25220.1 homeobox protein knotted-1-like 3; Swiss-Prot: sp|P48000|KNAT3_ARATH Homeobox protein knotted-1-like 3; TrEMBL-Plants: tr|V7CDZ8|V7CDZ8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0282700 | 22 | ||
| – | Homeobox protein knotted-1, putative; TAIR: AT5G25220.2 homeobox protein knotted-1-like 3; Swiss-Prot: sp|P48000|KNAT3_ARATH Homeobox protein knotted-1-like 3; TrEMBL-Plants: tr|V7CDZ8|V7CDZ8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0282700 | 22 | ||
| – | Homeobox protein knotted-1, putative; TAIR: AT5G25220.1 homeobox protein knotted-1-like 3; Swiss-Prot: sp|P48000|KNAT3_ARATH Homeobox protein knotted-1-like 3; TrEMBL-Plants: tr|V7CDZ8|V7CDZ8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0282700 | 22 | ||
| – | Homeobox protein knotted-1, putative; TAIR: AT5G25220.2 homeobox protein knotted-1-like 3; Swiss-Prot: sp|P48000|KNAT3_ARATH Homeobox protein knotted-1-like 3; TrEMBL-Plants: tr|V7CDZ8|V7CDZ8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0282700 | 22 | ||
| – | Homeobox protein knotted-1-like 1; TAIR: AT4G08150.1 homeobox knotted-like protein; Swiss-Prot: sp|O04135|KNAP2_MALDO Homeobox protein knotted-1-like 2; TrEMBL-Plants: tr|I1M8Y1|I1M8Y1_SOYBN KNOX-like DNA-binding protein; Found in the gene: LotjaGi5g1v0039100 | 24 | ||
| – | Homeobox protein knotted-1-like 1; TAIR: AT1G70510.1 homeobox knotted-like protein; Swiss-Prot: sp|Q9FP29|KNOS1_ORYSJ Homeobox protein knotted-1-like 1; TrEMBL-Plants: tr|I3SV38|I3SV38_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0230100 | 24 | ||
| – | Homeobox protein knotted-1, putative; TAIR: AT5G25220.1 homeobox protein knotted-1-like 3; Swiss-Prot: sp|P48000|KNAT3_ARATH Homeobox protein knotted-1-like 3; TrEMBL-Plants: tr|A0A0H3WB94|A0A0H3WB94_PEA Class II knotted-1-like 10 homeobox transcription factor; Found in the gene: LotjaGi6g1v0207800 | 22 | ||
| – | Homeobox-1; TAIR: AT1G62360.1 KNOX/ELK homeobox transcription factor; Swiss-Prot: sp|P46608|HSBH1_SOYBN Homeobox protein SBH1; TrEMBL-Plants: tr|A0A0S3S3Z4|A0A0S3S3Z4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0289900 | 23 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd00086 | CDD | 1 | 3.23 |