Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR019734
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 350 results. Now displaying 5 of 7 with 50 rows per page. This search has taken 5.652s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. Glutamyl-tRNA(Gln) amidotransferase subunit A; TAIR: AT3G17970.1 translocon at the outer membrane of chloroplasts 64-III; Swiss-Prot: sp|Q9MUK5|TOC64_PEA Translocon at the outer membrane of chloroplasts 64; TrEMBL-Plants: tr|G7LE58|G7LE58_MEDTR Translocon at the outer membrane ofs-like protein; Found in the gene: LotjaGi2g1v0197000 LjG1.1_chr2 63187113 63194807 -
n.a. Protein KINESIN LIGHT CHAIN-RELATED 3; TAIR: AT3G27960.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9LII8|KLCR2_ARATH Protein KINESIN LIGHT CHAIN-RELATED 2; TrEMBL-Plants: tr|A0A0L9VQ02|A0A0L9VQ02_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0246500 LjG1.1_chr2 71212674 71216309 -
n.a. Protein KINESIN LIGHT CHAIN-RELATED 3; TAIR: AT3G27960.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9LII8|KLCR2_ARATH Protein KINESIN LIGHT CHAIN-RELATED 2; TrEMBL-Plants: tr|A0A151R9K3|A0A151R9K3_CAJCA Nephrocystin-3; Found in the gene: LotjaGi2g1v0246500 LjG1.1_chr2 71213049 71215386 -
n.a. Protein KINESIN LIGHT CHAIN-RELATED 3; TAIR: AT3G27960.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9LII8|KLCR2_ARATH Protein KINESIN LIGHT CHAIN-RELATED 2; TrEMBL-Plants: tr|A0A151R9K3|A0A151R9K3_CAJCA Nephrocystin-3; Found in the gene: LotjaGi2g1v0246500 LjG1.1_chr2 71213049 71215386 -
n.a. Protein KINESIN LIGHT CHAIN-RELATED 3; TAIR: AT3G27960.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9LII8|KLCR2_ARATH Protein KINESIN LIGHT CHAIN-RELATED 2; TrEMBL-Plants: tr|A0A151R9K3|A0A151R9K3_CAJCA Nephrocystin-3; Found in the gene: LotjaGi2g1v0246500 LjG1.1_chr2 71213049 71215386 -
n.a. Tetratricopeptide repeat protein 7A; TAIR: AT2G43040.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q8GZN1|NPG1_ARATH Protein NPG1; TrEMBL-Plants: tr|A0A0R0LB33|A0A0R0LB33_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0343600 LjG1.1_chr2 82086118 82094088 +
n.a. Tetratricopeptide repeat protein; TAIR: AT2G43040.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q8GZN1|NPG1_ARATH Protein NPG1; TrEMBL-Plants: tr|I1L565|I1L565_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0343600 LjG1.1_chr2 82086151 82093656 +
n.a. Tetratricopeptide repeat protein; TAIR: AT2G43040.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q8GZN1|NPG1_ARATH Protein NPG1; TrEMBL-Plants: tr|I1L565|I1L565_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0343600 LjG1.1_chr2 82087051 82093009 +
n.a. Tetratricopeptide repeat (TPR)-like superfamily protein; TAIR: AT4G37210.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|P49321|NASP_HUMAN Nuclear autoantigenic sperm protein; TrEMBL-Plants: tr|A0A151TI33|A0A151TI33_CAJCA Nuclear autoantigenic sperm protein; Found in the gene: LotjaGi2g1v0396800 LjG1.1_chr2 89444191 89448518 -
n.a. Tetratricopeptide repeat protein 13; TAIR: AT4G37460.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|F4JS25|SRFR1_ARATH Suppressor of RPS4-RLD 1; TrEMBL-Plants: tr|G7K3X6|G7K3X6_MEDTR Suppressor of RPS4-RLD 1/TPR domain protein; Found in the gene: LotjaGi2g1v0406300 LjG1.1_chr2 90332622 90344192 -
n.a. Tetratricopeptide repeat protein 13; TAIR: AT4G37460.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|F4JS25|SRFR1_ARATH Suppressor of RPS4-RLD 1; TrEMBL-Plants: tr|G7K3X6|G7K3X6_MEDTR Suppressor of RPS4-RLD 1/TPR domain protein; Found in the gene: LotjaGi2g1v0406300 LjG1.1_chr2 90333051 90344070 -
n.a. Tetratricopeptide repeat protein 13; TAIR: AT4G37460.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|F4JS25|SRFR1_ARATH Suppressor of RPS4-RLD 1; TrEMBL-Plants: tr|G7K3X6|G7K3X6_MEDTR Suppressor of RPS4-RLD 1/TPR domain protein; Found in the gene: LotjaGi2g1v0406300 LjG1.1_chr2 90334229 90343778 -
n.a. Tetratricopeptide repeat protein 13; TAIR: AT4G37460.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|F4JS25|SRFR1_ARATH Suppressor of RPS4-RLD 1; TrEMBL-Plants: tr|G7K3X6|G7K3X6_MEDTR Suppressor of RPS4-RLD 1/TPR domain protein; Found in the gene: LotjaGi2g1v0406300 LjG1.1_chr2 90334229 90343781 -
n.a. Tetratricopeptide repeat protein 1-like; TAIR: AT1G62740.1 stress-inducible protein; Swiss-Prot: sp|Q43468|HSOP1_SOYBN Hsp70-Hsp90 organizing protein 1; TrEMBL-Plants: tr|I1LGM2|I1LGM2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0426200 LjG1.1_chr2 92387436 92395275 +
n.a. Tetratricopeptide repeat protein 1-like; TAIR: AT1G62740.1 stress-inducible protein; Swiss-Prot: sp|Q43468|HSOP1_SOYBN Hsp70-Hsp90 organizing protein 1; TrEMBL-Plants: tr|I1LGM2|I1LGM2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0426200 LjG1.1_chr2 92387673 92391043 +
n.a. SGT1; TAIR: AT4G11260.1 phosphatase-like protein; Swiss-Prot: sp|Q9SUT5|SGT1B_ARATH Protein SGT1 homolog B; TrEMBL-Plants: tr|A0A1J7H3E0|A0A1J7H3E0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0436700 LjG1.1_chr2 93318002 93322839 +
n.a. SGT1; TAIR: AT4G11260.1 phosphatase-like protein; Swiss-Prot: sp|Q9SUT5|SGT1B_ARATH Protein SGT1 homolog B; TrEMBL-Plants: tr|A0A1J7H3E0|A0A1J7H3E0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0436700 LjG1.1_chr2 93318002 93322839 +
n.a. Tetratricopeptide repeat-containing protein; TAIR: AT1G76630.2 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|F4I3Z5|SKI3_ARATH Tetratricopeptide repeat protein SKI3; TrEMBL-Plants: tr|K7K5N8|K7K5N8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0462200 LjG1.1_chr2 95547262 95569320 -
n.a. Tetratricopeptide repeat-containing protein; TAIR: AT1G76630.2 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|F4I3Z5|SKI3_ARATH Tetratricopeptide repeat protein SKI3; TrEMBL-Plants: tr|K7K5N9|K7K5N9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0462200 LjG1.1_chr2 95547262 95569320 -
n.a. Tetratricopeptide repeat-containing protein; TAIR: AT1G76630.2 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|F4I3Z5|SKI3_ARATH Tetratricopeptide repeat protein SKI3; TrEMBL-Plants: tr|K7K5N9|K7K5N9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0462200 LjG1.1_chr2 95547806 95569213 -
n.a. N-alpha-acetyltransferase 16, NatA auxiliary subunit; TAIR: AT1G80410.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q9BXJ9|NAA15_HUMAN N-alpha-acetyltransferase 15, NatA auxiliary subunit; TrEMBL-Plants: tr|A0A072VDQ9|A0A072VDQ9_MEDTR Amino-terminal acetyltransferase, putative; Found in the gene: LotjaGi3g1v0014700 LjG1.1_chr3 1548402 1566203 -
n.a. N-alpha-acetyltransferase 16, NatA auxiliary subunit; TAIR: AT1G80410.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q9DBB4|NAA16_MOUSE N-alpha-acetyltransferase 16, NatA auxiliary subunit; TrEMBL-Plants: tr|A0A1J7HQ13|A0A1J7HQ13_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0014700 LjG1.1_chr3 1549181 1564867 -
n.a. Anaphase-promoting complex subunit 6; TAIR: AT1G78770.1 anaphase promoting complex 6; Swiss-Prot: sp|B3DNN5|CDC16_ARATH Anaphase-promoting complex subunit 6; TrEMBL-Plants: tr|I1KDK4|I1KDK4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0041100 LjG1.1_chr3 4433456 4442958 +
n.a. TPR repeat thioredoxin TTL1-like protein; TAIR: AT1G53300.1 tetratricopetide-repeat thioredoxin-like 1; Swiss-Prot: sp|Q9MAH1|TTL1_ARATH TPR repeat-containing thioredoxin TTL1; TrEMBL-Plants: tr|V7AK33|V7AK33_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0042300 LjG1.1_chr3 4523489 4527575 -
n.a. Clustered mitochondria protein homolog; TAIR: AT3G52140.2 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|F4J5S1|CLU_ARATH Clustered mitochondria protein; TrEMBL-Plants: tr|V7BVK6|V7BVK6_PHAVU Clustered mitochondria protein homolog; Found in the gene: LotjaGi3g1v0058500 LjG1.1_chr3 6148523 6164527 +
n.a. Peptidylprolyl isomerase; TAIR: AT3G25230.1 rotamase FKBP 1; Swiss-Prot: sp|Q38931|FKB62_ARATH Peptidyl-prolyl cis-trans isomerase FKBP62; TrEMBL-Plants: tr|A0A151T0E7|A0A151T0E7_CAJCA Peptidylprolyl isomerase; Found in the gene: LotjaGi3g1v0089300 LjG1.1_chr3 10095197 10100134 +
n.a. Peptidylprolyl isomerase; TAIR: AT3G25230.1 rotamase FKBP 1; Swiss-Prot: sp|Q38931|FKB62_ARATH Peptidyl-prolyl cis-trans isomerase FKBP62; TrEMBL-Plants: tr|A0A151T0E7|A0A151T0E7_CAJCA Peptidylprolyl isomerase; Found in the gene: LotjaGi3g1v0089300 LjG1.1_chr3 10095352 10099128 +
n.a. Clustered mitochondria protein homolog; TAIR: AT3G52140.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|F4J5S1|CLU_ARATH Clustered mitochondria protein; TrEMBL-Plants: tr|I1MJM1|I1MJM1_SOYBN Clustered mitochondria protein homolog; Found in the gene: LotjaGi3g1v0124300 LjG1.1_chr3 15200583 15219796 -
n.a. Clustered mitochondria protein homolog; TAIR: AT3G52140.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|F4J5S1|CLU_ARATH Clustered mitochondria protein; TrEMBL-Plants: tr|I1MJM1|I1MJM1_SOYBN Clustered mitochondria protein homolog; Found in the gene: LotjaGi3g1v0124300 LjG1.1_chr3 15201214 15217059 -
n.a. Clustered mitochondria protein homolog; TAIR: AT3G52140.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|F4J5S1|CLU_ARATH Clustered mitochondria protein; TrEMBL-Plants: tr|I1MJM1|I1MJM1_SOYBN Clustered mitochondria protein homolog; Found in the gene: LotjaGi3g1v0124300 LjG1.1_chr3 15201214 15217061 -
n.a. Peptidylprolyl isomerase; TAIR: AT1G56090.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q5RAP0|UN45A_PONAB Protein unc-45 homolog A; TrEMBL-Plants: tr|I1KU07|I1KU07_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0137700 LjG1.1_chr3 17879209 17881972 +
n.a. Peptidylprolyl isomerase; TAIR: AT1G56090.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q5RAP0|UN45A_PONAB Protein unc-45 homolog A; TrEMBL-Plants: tr|I1KU07|I1KU07_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0137700 LjG1.1_chr3 17879214 17883575 +
n.a. TPR repeat thioredoxin TTL1-like protein; TAIR: AT1G53300.1 tetratricopetide-repeat thioredoxin-like 1; Swiss-Prot: sp|Q9MAH1|TTL1_ARATH TPR repeat-containing thioredoxin TTL1; TrEMBL-Plants: tr|A0A1J7I9S5|A0A1J7I9S5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0158700 LjG1.1_chr3 21679360 21684118 -
n.a. Ethylene-overproduction protein 1; TAIR: AT3G51770.2 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|O65020|ETO1_ARATH Ethylene-overproduction protein 1; TrEMBL-Plants: tr|I1J7G9|I1J7G9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0196800 LjG1.1_chr3 28814330 28821058 +
n.a. Peptidylprolyl isomerase; TAIR: AT3G54010.1 FKBP-type peptidyl-prolyl cis-trans isomerase family protein; Swiss-Prot: sp|Q7DMA9|PAS1_ARATH Peptidyl-prolyl cis-trans isomerase PASTICCINO1; TrEMBL-Plants: tr|I1JLY3|I1JLY3_SOYBN Peptidylprolyl isomerase; Found in the gene: LotjaGi3g1v0220500 LjG1.1_chr3 33218592 33231678 -
n.a. Peptidylprolyl isomerase; TAIR: AT3G54010.1 FKBP-type peptidyl-prolyl cis-trans isomerase family protein; Swiss-Prot: sp|Q7DMA9|PAS1_ARATH Peptidyl-prolyl cis-trans isomerase PASTICCINO1; TrEMBL-Plants: tr|I1JLY3|I1JLY3_SOYBN Peptidylprolyl isomerase; Found in the gene: LotjaGi3g1v0220500 LjG1.1_chr3 33219321 33231365 -
n.a. E3 ubiquitin-protein ligase CHIP; TAIR: AT3G07370.1 carboxyl terminus of HSC70-interacting protein; Swiss-Prot: sp|Q9SRS9|CHIP_ARATH E3 ubiquitin-protein ligase CHIP; TrEMBL-Plants: tr|I3SQ71|I3SQ71_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0272700 LjG1.1_chr3 52841353 52856472 +
n.a. Tetratricopeptide repeat-containing family protein; TAIR: AT3G07370.1 carboxyl terminus of HSC70-interacting protein; Swiss-Prot: sp|Q9SRS9|CHIP_ARATH E3 ubiquitin-protein ligase CHIP; TrEMBL-Plants: tr|I3SQ71|I3SQ71_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0272700 LjG1.1_chr3 52841845 52842464 +
n.a. Anaphase-promoting complex subunit 8; TAIR: AT3G48150.1 anaphase-promoting complex subunit 8; Swiss-Prot: sp|Q9STS3|CDC23_ARATH Anaphase-promoting complex subunit 8; TrEMBL-Plants: tr|I1LGI1|I1LGI1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0298300 LjG1.1_chr3 62002517 62007942 +
n.a. Peroxisomal targeting signal 1 receptor; TAIR: AT5G56290.1 peroxin 5; Swiss-Prot: sp|Q9FMA3|PEX5_ARATH Peroxisome biogenesis protein 5; TrEMBL-Plants: tr|G7J0B8|G7J0B8_MEDTR Peroxisomal targeting signal 1 receptor; Found in the gene: LotjaGi3g1v0330100 LjG1.1_chr3 69758398 69776390 -
n.a. Peroxisomal targeting signal 1 receptor; TAIR: AT5G56290.1 peroxin 5; Swiss-Prot: sp|Q9FMA3|PEX5_ARATH Peroxisome biogenesis protein 5; TrEMBL-Plants: tr|K7KJI6|K7KJI6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0330100 LjG1.1_chr3 69759648 69774198 -
n.a. Peroxisomal targeting signal 1 receptor; TAIR: AT5G56290.1 peroxin 5; Swiss-Prot: sp|Q9FMA3|PEX5_ARATH Peroxisome biogenesis protein 5; TrEMBL-Plants: tr|K7KJI6|K7KJI6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0330100 LjG1.1_chr3 69759648 69775026 -
n.a. Tetratricopeptide repeat (TPR)-like superfamily protein; TAIR: AT1G78915.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|P41842|TTC27_CAEEL Tetratricopeptide repeat-containing protein trd-1; TrEMBL-Plants: tr|I1KG23|I1KG23_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0340600 LjG1.1_chr3 71526383 71537904 +
n.a. Clustered mitochondria protein; TAIR: AT1G15290.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|F4JKH6|TSS_ARATH Protein TSS; TrEMBL-Plants: tr|A0A0R0IYJ9|A0A0R0IYJ9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0354600 LjG1.1_chr3 73621819 73634758 -
n.a. Clustered mitochondria protein; TAIR: AT1G15290.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|F4JKH6|TSS_ARATH Protein TSS; TrEMBL-Plants: tr|A0A0R0IYJ9|A0A0R0IYJ9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0354600 LjG1.1_chr3 73621946 73634516 -
n.a. Clustered mitochondria protein; TAIR: AT1G15290.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|F4JKH6|TSS_ARATH Protein TSS; TrEMBL-Plants: tr|A0A0R0IYJ9|A0A0R0IYJ9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0354600 LjG1.1_chr3 73621969 73634590 -
n.a. N-alpha-acetyltransferase 16, NatA auxiliary subunit; TAIR: AT1G80410.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q9BXJ9|NAA15_HUMAN N-alpha-acetyltransferase 15, NatA auxiliary subunit; TrEMBL-Plants: tr|I1KV97|I1KV97_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0361700 LjG1.1_chr3 74509918 74524622 -
n.a. N-alpha-acetyltransferase 16, NatA auxiliary subunit; TAIR: AT1G80410.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q9DBB4|NAA16_MOUSE N-alpha-acetyltransferase 16, NatA auxiliary subunit; TrEMBL-Plants: tr|I1KV97|I1KV97_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0361700 LjG1.1_chr3 74511592 74523737 -
n.a. Clustered mitochondria protein; TAIR: AT1G01320.3 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|F4JKH6|TSS_ARATH Protein TSS; TrEMBL-Plants: tr|A0A072TYM9|A0A072TYM9_MEDTR Eukaryotic translation initiation factor 3 subunit; Found in the gene: LotjaGi3g1v0395200 LjG1.1_chr3 79505637 79520364 +
n.a. Clustered mitochondria protein; TAIR: AT1G01320.2 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|F4JKH6|TSS_ARATH Protein TSS; TrEMBL-Plants: tr|A0A072TYM9|A0A072TYM9_MEDTR Eukaryotic translation initiation factor 3 subunit; Found in the gene: LotjaGi3g1v0395200 LjG1.1_chr3 79505637 79520364 +