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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR019734
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We have found 350 results. Now displaying 6 of 7 with 50 rows per page. This search has taken 5.476s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. Clustered mitochondria protein; TAIR: AT1G01320.2 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|F4JKH6|TSS_ARATH Protein TSS; TrEMBL-Plants: tr|A0A072TYM9|A0A072TYM9_MEDTR Eukaryotic translation initiation factor 3 subunit; Found in the gene: LotjaGi3g1v0395200 LjG1.1_chr3 79505649 79519794 +
n.a. Protein KINESIN LIGHT CHAIN-RELATED 3; TAIR: AT4G10840.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|O81629|KLCR1_ARATH Protein KINESIN LIGHT CHAIN-RELATED 1; TrEMBL-Plants: tr|A0A072TN22|A0A072TN22_MEDTR Kinesin light chain; Found in the gene: LotjaGi3g1v0397400 LjG1.1_chr3 79870907 79874854 -
n.a. TPR repeat thioredoxin TTL1-like protein; TAIR: AT2G42580.1 tetratricopetide-repeat thioredoxin-like 3; Swiss-Prot: sp|Q9SIN1|TTL3_ARATH Inactive TPR repeat-containing thioredoxin TTL3; TrEMBL-Plants: tr|I1M3M3|I1M3M3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0450500 LjG1.1_chr3 86410277 86419441 +
n.a. TPR repeat thioredoxin TTL1-like protein; TAIR: AT2G42580.1 tetratricopetide-repeat thioredoxin-like 3; Swiss-Prot: sp|Q9SIN1|TTL3_ARATH Inactive TPR repeat-containing thioredoxin TTL3; TrEMBL-Plants: tr|I1M3M3|I1M3M3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0450500 LjG1.1_chr3 86410387 86415900 +
n.a. TPR repeat thioredoxin TTL1-like protein; TAIR: AT2G42580.1 tetratricopetide-repeat thioredoxin-like 3; Swiss-Prot: sp|Q9SIN1|TTL3_ARATH Inactive TPR repeat-containing thioredoxin TTL3; TrEMBL-Plants: tr|I1M3M3|I1M3M3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0450500 LjG1.1_chr3 86410541 86415798 +
n.a. Peptidylprolyl isomerase; TAIR: AT5G21990.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|B7ZWR6|OEP61_ARATH Outer envelope protein 61; TrEMBL-Plants: tr|I1KFG3|I1KFG3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0469600 LjG1.1_chr3 88501362 88507020 +
n.a. DnaJ; TAIR: AT5G12430.1 Heat shock protein DnaJ with tetratricopeptide repeat-containing protein; Swiss-Prot: sp|Q5R8D8|DNJC7_PONAB DnaJ homolog subfamily C member 7; TrEMBL-Plants: tr|I1LIL7|I1LIL7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0535100 LjG1.1_chr3 95184192 95198995 -
n.a. DnaJ; TAIR: AT5G12430.1 Heat shock protein DnaJ with tetratricopeptide repeat-containing protein; Swiss-Prot: sp|Q5R8D8|DNJC7_PONAB DnaJ homolog subfamily C member 7; TrEMBL-Plants: tr|I1LIL7|I1LIL7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0535100 LjG1.1_chr3 95189217 95198863 -
n.a. DnaJ like subfamily C member 7; TAIR: AT5G12430.1 Heat shock protein DnaJ with tetratricopeptide repeat-containing protein; Swiss-Prot: sp|Q5R8D8|DNJC7_PONAB DnaJ homolog subfamily C member 7; TrEMBL-Plants: tr|A0A0B2PCY2|A0A0B2PCY2_GLYSO DnaJ like subfamily C member 7; Found in the gene: LotjaGi3g1v0535100 LjG1.1_chr3 95189313 95198954 -
n.a. Peptidylprolyl isomerase; TAIR: AT3G21640.1 FKBP-type peptidyl-prolyl cis-trans isomerase family protein; Swiss-Prot: sp|Q9LDC0|FKB42_ARATH Peptidyl-prolyl cis-trans isomerase FKBP42; TrEMBL-Plants: tr|A0A0B2RKD3|A0A0B2RKD3_GLYSO Peptidylprolyl isomerase; Found in the gene: LotjaGi3g1v0550000 LjG1.1_chr3 96701168 96706171 -
n.a. Tetratricopeptide repeat protein-like; TAIR: AT1G62390.1 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|K7TQE3|HIP_MAIZE HSP-interacting protein; TrEMBL-Plants: tr|I1MR20|I1MR20_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0010000 LjG1.1_chr4 1299198 1302751 +
n.a. Tetratricopeptide repeat protein-like; TAIR: AT1G62390.1 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|K7TQE3|HIP_MAIZE HSP-interacting protein; TrEMBL-Plants: tr|I1MR20|I1MR20_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0010000 LjG1.1_chr4 1299677 1302000 +
n.a. Protein SLOW GREEN 1, chloroplastic; TAIR: AT3G18420.1 Protein prenylyltransferase superfamily protein; Swiss-Prot: sp|Q9LS48|SG1_ARATH protein SLOW GREEN 1, chloroplastic; TrEMBL-Plants: tr|I1KRM4|I1KRM4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0018000 LjG1.1_chr4 2281856 2285296 +
n.a. Glutamyl-tRNA(Gln) amidotransferase subunit A; TAIR: AT5G09420.1 translocon at the outer membrane of chloroplasts 64-V; Swiss-Prot: sp|F4KCL7|OE64M_ARATH Outer envelope protein 64, mitochondrial; TrEMBL-Plants: tr|I1K2N1|I1K2N1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0035400 LjG1.1_chr4 4281722 4293134 +
n.a. Glutamyl-tRNA(Gln) amidotransferase subunit A; TAIR: AT5G09420.1 translocon at the outer membrane of chloroplasts 64-V; Swiss-Prot: sp|F4KCL7|OE64M_ARATH Outer envelope protein 64, mitochondrial; TrEMBL-Plants: tr|I1K2N1|I1K2N1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0035400 LjG1.1_chr4 4281781 4292979 +
n.a. Vacuolar protein sorting-associated protein 27; TAIR: AT1G61690.1 phosphoinositide binding protein; Swiss-Prot: sp|Q2H922|PAN1_CHAGB Actin cytoskeleton-regulatory complex protein PAN1; TrEMBL-Plants: tr|A0A0R0JB68|A0A0R0JB68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0046000 LjG1.1_chr4 5393504 5400800 +
n.a. FYVE zinc finger protein; TAIR: AT1G61690.1 phosphoinositide binding protein; Swiss-Prot: sp|Q960X8|HRS_DROME Hepatocyte growth factor-regulated tyrosine kinase substrate; TrEMBL-Plants: tr|A0A0R0JB68|A0A0R0JB68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0046000 LjG1.1_chr4 5393504 5400800 +
n.a. FYVE zinc finger protein; TAIR: AT1G61690.1 phosphoinositide binding protein; Swiss-Prot: sp|Q960X8|HRS_DROME Hepatocyte growth factor-regulated tyrosine kinase substrate; TrEMBL-Plants: tr|A0A0R0JB68|A0A0R0JB68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0046000 LjG1.1_chr4 5393637 5400736 +
n.a. Histone-lysine N-methyltransferase; TAIR: AT1G26760.1 SET domain protein 35; Swiss-Prot: sp|A5DQN2|SET5_PICGU Potential protein lysine methyltransferase SET5; TrEMBL-Plants: tr|G7JG98|G7JG98_MEDTR TPR domain protein; Found in the gene: LotjaGi4g1v0090500 LjG1.1_chr4 11980353 11982987 +
n.a. Tetratricopeptide repeat protein 13; TAIR: AT4G37460.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|F4JS25|SRFR1_ARATH Suppressor of RPS4-RLD 1; TrEMBL-Plants: tr|I1MVQ3|I1MVQ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0098200 LjG1.1_chr4 13281055 13296793 +
n.a. Peptidyl-prolyl cis-trans isomerase; TAIR: AT2G15790.1 peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase; Swiss-Prot: sp|Q9C566|CYP40_ARATH Peptidyl-prolyl cis-trans isomerase CYP40; TrEMBL-Plants: tr|A0A0L9TGI2|A0A0L9TGI2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0107700 LjG1.1_chr4 15126480 15132594 -
n.a. Tetratricopeptide repeat (TPR)-like superfamily protein; TAIR: AT3G51280.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9SD20|MS5L2_ARATH Protein POLLENLESS 3-LIKE 2; TrEMBL-Plants: tr|A0A0B2PAU9|A0A0B2PAU9_GLYSO Uncharacterized protein; Found in the gene: LotjaGi4g1v0130100 LjG1.1_chr4 19058790 19061141 +
n.a. Tetratricopeptide repeat protein 7A; TAIR: AT2G43040.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q8GZN1|NPG1_ARATH Protein NPG1; TrEMBL-Plants: tr|A0A1J7GH42|A0A1J7GH42_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0144800 LjG1.1_chr4 23241571 23247812 +
n.a. Tetratricopeptide repeat protein 7A; TAIR: AT2G43040.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q8GZN1|NPG1_ARATH Protein NPG1; TrEMBL-Plants: tr|A0A1J7GH42|A0A1J7GH42_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0144800 LjG1.1_chr4 23241966 23246681 +
n.a. Tetratricopeptide repeat protein 7A; TAIR: AT2G43040.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q8GZN1|NPG1_ARATH Protein NPG1; TrEMBL-Plants: tr|A0A1J7GH42|A0A1J7GH42_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0144800 LjG1.1_chr4 23241981 23245726 +
n.a. Tetratricopeptide repeat-like superfamily protein; TAIR: AT3G26580.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q28IV3|RPAP3_XENTR RNA polymerase II-associated protein 3; TrEMBL-Plants: tr|M5XWF8|M5XWF8_PRUPE Uncharacterized protein; Found in the gene: LotjaGi4g1v0158200 LjG1.1_chr4 27769365 27773931 -
n.a. tetratricopeptide repeat (TPR)-containing protein; TAIR: AT4G22670.1 HSP70-interacting protein 1; Swiss-Prot: sp|Q93YR3|F10AL_ARATH FAM10 family protein At4g22670; TrEMBL-Plants: tr|V9VGV1|V9VGV1_LOTJA HSP70 interaction protein; Found in the gene: LotjaGi4g1v0216800_LC LjG1.1_chr4 51017894 51024757 -
n.a. tetratricopeptide repeat (TPR)-containing protein; TAIR: AT4G22670.1 HSP70-interacting protein 1; Swiss-Prot: sp|Q93YR3|F10AL_ARATH FAM10 family protein At4g22670; TrEMBL-Plants: tr|V9VGV1|V9VGV1_LOTJA HSP70 interaction protein; Found in the gene: LotjaGi4g1v0216800_LC LjG1.1_chr4 51017894 51024757 -
n.a. Protein KINESIN LIGHT CHAIN-RELATED 3; TAIR: AT1G27500.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|F4HSX9|KLCR3_ARATH Protein KINESIN LIGHT CHAIN-RELATED 3; TrEMBL-Plants: tr|A0A1J7GGV8|A0A1J7GGV8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0234800 LjG1.1_chr4 54897102 54900769 -
n.a. CCR4-NOT transcription complex subunit 10; TAIR: AT5G35430.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q08CL8|CNO10_DANRE CCR4-NOT transcription complex subunit 10; TrEMBL-Plants: tr|A0A0L9TRF8|A0A0L9TRF8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0275400 LjG1.1_chr4 64571331 64578962 +
n.a. CCR4-NOT transcription complex subunit 10; TAIR: AT5G35430.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q08CL8|CNO10_DANRE CCR4-NOT transcription complex subunit 10; TrEMBL-Plants: tr|V7CDT0|V7CDT0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0275400 LjG1.1_chr4 64575198 64577830 +
n.a. Octicosapeptide/Phox/Bem1p domain-containing protein / tetratricopeptide repeat-containing protein; TAIR: AT2G25290.1 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|K7TQE3|HIP_MAIZE HSP-interacting protein; TrEMBL-Plants: tr|I1LZU9|I1LZU9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0280600 LjG1.1_chr4 65157172 65168093 -
n.a. PsbB mRNA maturation factor; TAIR: AT3G17040.1 high chlorophyll fluorescent 107; Swiss-Prot: sp|Q8RWG2|CF107_ARATH Protein high chlorophyll fluorescent 107; TrEMBL-Plants: tr|G7JNW2|G7JNW2_MEDTR PsbB mRNA maturation factor Mbb1; Found in the gene: LotjaGi4g1v0330900 LjG1.1_chr4 71006285 71011348 -
n.a. Peptidylprolyl isomerase; TAIR: AT5G48570.1 FKBP-type peptidyl-prolyl cis-trans isomerase family protein; Swiss-Prot: sp|Q9FJL3|FKB65_ARATH Peptidyl-prolyl cis-trans isomerase FKBP65; TrEMBL-Plants: tr|A0A072TTW4|A0A072TTW4_MEDTR Peptidylprolyl isomerase; Found in the gene: LotjaGi4g1v0368800 LjG1.1_chr4 74849166 74852749 -
n.a. Protein TONSOKU; TAIR: AT3G18730.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q6Q4D0|TONS_ARATH Protein TONSOKU; TrEMBL-Plants: tr|I1KTF7|I1KTF7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0408000 LjG1.1_chr4 78393767 78403544 +
n.a. Tetratricopeptide repeat-containing family protein; TAIR: AT4G30480.2 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q99614|TTC1_HUMAN Tetratricopeptide repeat protein 1; TrEMBL-Plants: tr|C6TEB0|C6TEB0_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0408800 LjG1.1_chr4 78501056 78511613 -
n.a. Protein KINESIN LIGHT CHAIN-RELATED 3; TAIR: AT4G10840.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|O81629|KLCR1_ARATH Protein KINESIN LIGHT CHAIN-RELATED 1; TrEMBL-Plants: tr|A0A1J7H0T0|A0A1J7H0T0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437600 LjG1.1_chr4 81069562 81075867 -
n.a. Protein KINESIN LIGHT CHAIN-RELATED 3; TAIR: AT4G10840.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|O81629|KLCR1_ARATH Protein KINESIN LIGHT CHAIN-RELATED 1; TrEMBL-Plants: tr|A0A1J7H0T0|A0A1J7H0T0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437600 LjG1.1_chr4 81070052 81072553 -
n.a. Protein KINESIN LIGHT CHAIN-RELATED 3; TAIR: AT4G10840.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|O81629|KLCR1_ARATH Protein KINESIN LIGHT CHAIN-RELATED 1; TrEMBL-Plants: tr|A0A1J7H0T0|A0A1J7H0T0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437600 LjG1.1_chr4 81070052 81072658 -
n.a. Protein KINESIN LIGHT CHAIN-RELATED 3; TAIR: AT4G10840.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|O81629|KLCR1_ARATH Protein KINESIN LIGHT CHAIN-RELATED 1; TrEMBL-Plants: tr|A0A1J7H0T0|A0A1J7H0T0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437600 LjG1.1_chr4 81071015 81072658 -
n.a. Glutamyl-tRNA(Gln) amidotransferase subunit A; TAIR: AT3G17970.1 translocon at the outer membrane of chloroplasts 64-III; Swiss-Prot: sp|Q9MUK5|TOC64_PEA Translocon at the outer membrane of chloroplasts 64; TrEMBL-Plants: tr|G7LE58|G7LE58_MEDTR Translocon at the outer membrane ofs-like protein; Found in the gene: LotjaGi4g1v0464300 LjG1.1_chr4 83439251 83446423 +
n.a. Thioredoxin; TAIR: AT3G17880.2 tetraticopeptide domain-containing thioredoxin; Swiss-Prot: sp|Q8VWG7|TDX_ARATH TPR repeat-containing thioredoxin TDX; TrEMBL-Plants: tr|I1KQM0|I1KQM0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0465200 LjG1.1_chr4 83530853 83538115 -
n.a. Tetratricopeptide repeat; TAIR: AT3G17670.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q96EQ0|SGTB_HUMAN Small glutamine-rich tetratricopeptide repeat-containing protein beta; TrEMBL-Plants: tr|G7IVX0|G7IVX0_MEDTR TPR domain protein; Found in the gene: LotjaGi4g1v0466300 LjG1.1_chr4 83700459 83704903 -
n.a. Tetratricopeptide repeat protein 7A; TAIR: AT1G27460.1 no pollen germination related 1; Swiss-Prot: sp|Q9CB03|NPGR1_ARATH Protein NPGR1; TrEMBL-Plants: tr|A0A151S1F0|A0A151S1F0_CAJCA Tetratricopeptide repeat protein 7B; Found in the gene: LotjaGi5g1v0033400 LjG1.1_chr5 5479902 5485169 +
n.a. Tetratricopeptide repeat protein 7A; TAIR: AT1G27460.1 no pollen germination related 1; Swiss-Prot: sp|Q9CB03|NPGR1_ARATH Protein NPGR1; TrEMBL-Plants: tr|A0A151S1F0|A0A151S1F0_CAJCA Tetratricopeptide repeat protein 7B; Found in the gene: LotjaGi5g1v0033400 LjG1.1_chr5 5480047 5485072 +
n.a. Tetratricopeptide repeat protein 7A; TAIR: AT1G27460.1 no pollen germination related 1; Swiss-Prot: sp|Q9CB03|NPGR1_ARATH Protein NPGR1; TrEMBL-Plants: tr|A0A151S1F0|A0A151S1F0_CAJCA Tetratricopeptide repeat protein 7B; Found in the gene: LotjaGi5g1v0033400 LjG1.1_chr5 5481170 5484706 +
n.a. Peptidylprolyl isomerase; TAIR: AT3G25230.1 rotamase FKBP 1; Swiss-Prot: sp|Q38931|FKB62_ARATH Peptidyl-prolyl cis-trans isomerase FKBP62; TrEMBL-Plants: tr|G7IBB7|G7IBB7_MEDTR Peptidylprolyl isomerase; Found in the gene: LotjaGi5g1v0034800 LjG1.1_chr5 5757986 5764520 -
n.a. Octicosapeptide/Phox/Bem1p domain-containing protein / tetratricopeptide repeat-containing protein; TAIR: AT2G25290.1 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|K7TQE3|HIP_MAIZE HSP-interacting protein; TrEMBL-Plants: tr|A0A072VDJ0|A0A072VDJ0_MEDTR Octicosapeptide/phox/Bem1p domain protein; Found in the gene: LotjaGi5g1v0058100 LjG1.1_chr5 9779213 9785001 +
n.a. Octicosapeptide/Phox/Bem1p domain-containing protein / tetratricopeptide repeat-containing protein; TAIR: AT2G25290.1 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|K7TQE3|HIP_MAIZE HSP-interacting protein; TrEMBL-Plants: tr|A0A072VDJ0|A0A072VDJ0_MEDTR Octicosapeptide/phox/Bem1p domain protein; Found in the gene: LotjaGi5g1v0058100 LjG1.1_chr5 9779518 9781756 +
n.a. Protein SLOW GREEN 1, chloroplastic; TAIR: AT2G37400.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9LS48|SG1_ARATH protein SLOW GREEN 1, chloroplastic; TrEMBL-Plants: tr|A0A1J7IS44|A0A1J7IS44_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0070500 LjG1.1_chr5 11634388 11637331 +