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The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.
We have found 378 results. Now displaying 6 of 8 with 50 rows per page. This search has taken 5.628s to perform.
Transcript | Name | Description | Chr | Start | End | Strand | Domain predictions | GO predictions |
---|---|---|---|---|---|---|---|---|
n.a. | O-methyltransferase, putative; TAIR: AT5G54160.1 O-methyltransferase 1; Swiss-Prot: sp|Q6WUC2|7OMT_PAPSO (R,S)-reticuline 7-O-methyltransferase; TrEMBL-Plants: tr|I3SGC9|I3SGC9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0457700 | LjG1.1_chr3 | 87181471 | 87182714 | + | – | ||
n.a. | Transcription factor; TAIR: AT5G22220.2 E2F transcription factor 1; Swiss-Prot: sp|Q9FV71|E2FB_ARATH Transcription factor E2FB; TrEMBL-Plants: tr|K7LQ43|K7LQ43_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0472800 | LjG1.1_chr3 | 88995617 | 89001217 | + | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A0R0LCQ5|A0A0R0LCQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0502700 | LjG1.1_chr3 | 92098841 | 92106783 | + | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A0R0LCQ5|A0A0R0LCQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0502700 | LjG1.1_chr3 | 92098858 | 92105373 | + | – | ||
n.a. | Heat shock transcription factor; TAIR: AT5G16820.1 heat shock factor 3; Swiss-Prot: sp|Q84T61|HSFA1_ORYSJ Heat stress transcription factor A-1; TrEMBL-Plants: tr|G7JSS3|G7JSS3_MEDTR Heat shock transcription factor A3; Found in the gene: LotjaGi3g1v0542200 | LjG1.1_chr3 | 95873589 | 95876759 | + | – | ||
n.a. | COP9 signalosome complex subunit 4; TAIR: AT5G42970.1 Proteasome component (PCI) domain protein; Swiss-Prot: sp|Q8L5U0|CSN4_ARATH COP9 signalosome complex subunit 4; TrEMBL-Plants: tr|I1L5P9|I1L5P9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0553000 | LjG1.1_chr3 | 97042981 | 97048645 | - | – | ||
n.a. | COP9 signalosome complex subunit-like protein; TAIR: AT5G42970.1 Proteasome component (PCI) domain protein; Swiss-Prot: sp|Q8L5U0|CSN4_ARATH COP9 signalosome complex subunit 4; TrEMBL-Plants: tr|A0A151TLK9|A0A151TLK9_CAJCA COP9 signalosome complex subunit 4; Found in the gene: LotjaGi3g1v0553000 | LjG1.1_chr3 | 97043480 | 97046774 | - | – | ||
n.a. | COP9 signalosome complex subunit-like protein; TAIR: AT5G42970.1 Proteasome component (PCI) domain protein; Swiss-Prot: sp|Q8L5U0|CSN4_ARATH COP9 signalosome complex subunit 4; TrEMBL-Plants: tr|A0A151TLK9|A0A151TLK9_CAJCA COP9 signalosome complex subunit 4; Found in the gene: LotjaGi3g1v0553000 | LjG1.1_chr3 | 97043480 | 97046777 | - | – | ||
n.a. | COP9 signalosome complex subunit 4; TAIR: AT5G42970.1 Proteasome component (PCI) domain protein; Swiss-Prot: sp|Q8L5U0|CSN4_ARATH COP9 signalosome complex subunit 4; TrEMBL-Plants: tr|I1L5P9|I1L5P9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0553000 | LjG1.1_chr3 | 97043480 | 97048245 | - | – | ||
n.a. | COP9 signalosome complex subunit 4; TAIR: AT5G42970.1 Proteasome component (PCI) domain protein; Swiss-Prot: sp|Q8L5U0|CSN4_ARATH COP9 signalosome complex subunit 4; TrEMBL-Plants: tr|I1L5P9|I1L5P9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0553000 | LjG1.1_chr3 | 97043480 | 97048515 | - | – | ||
n.a. | Transcription initiation factor IIF subunit alpha; TAIR: AT4G12610.2 transcription initiation factor IIF subunit alpha RAP74; Swiss-Prot: sp|Q9SU25|T2FA_ARATH Transcription initiation factor IIF subunit alpha; TrEMBL-Plants: tr|A0A0S3RA60|A0A0S3RA60_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0008900 | LjG1.1_chr4 | 1208539 | 1216723 | + | – | ||
n.a. | Transcription initiation factor IIF subunit alpha; TAIR: AT4G12610.2 transcription initiation factor IIF subunit alpha RAP74; Swiss-Prot: sp|Q9SU25|T2FA_ARATH Transcription initiation factor IIF subunit alpha; TrEMBL-Plants: tr|A0A0S3RA60|A0A0S3RA60_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0008900 | LjG1.1_chr4 | 1208628 | 1215151 | + | – | ||
n.a. | Transcription initiation factor IIF subunit alpha; TAIR: AT4G12610.2 transcription initiation factor IIF subunit alpha RAP74; Swiss-Prot: sp|Q9SU25|T2FA_ARATH Transcription initiation factor IIF subunit alpha; TrEMBL-Plants: tr|A0A0S3RA60|A0A0S3RA60_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0008900 | LjG1.1_chr4 | 1208628 | 1215151 | + | – | ||
n.a. | Heat shock transcription factor; TAIR: AT5G62020.1 heat shock transcription factor B2A; Swiss-Prot: sp|Q338B0|HFA2C_ORYSJ Heat stress transcription factor A-2c; TrEMBL-Plants: tr|I3SY63|I3SY63_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0055500 | LjG1.1_chr4 | 6689209 | 6691489 | - | – | ||
n.a. | O-methyltransferase, putative; TAIR: AT4G35160.1 O-methyltransferase family protein; Swiss-Prot: sp|Q84KK4|I4OMT_LOTJA Isoflavone 4'-O-methyltransferase; TrEMBL-Plants: tr|I3RZV3|I3RZV3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0062900 | LjG1.1_chr4 | 7796727 | 7799840 | - | – | ||
n.a. | O-methyltransferase, putative; TAIR: AT4G35160.1 O-methyltransferase family protein; Swiss-Prot: sp|Q84KK4|I4OMT_LOTJA Isoflavone 4'-O-methyltransferase; TrEMBL-Plants: tr|I3RZV3|I3RZV3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0063300 | LjG1.1_chr4 | 7882447 | 7887708 | + | – | ||
n.a. | La; TAIR: AT3G19090.1 RNA-binding protein; Swiss-Prot: sp|Q9LHL3|LRP6C_ARATH La-related protein 6C; TrEMBL-Plants: tr|G7JMI2|G7JMI2_MEDTR LA-related protein 6 LA RNA-binding domain protein; Found in the gene: LotjaGi4g1v0071000 | LjG1.1_chr4 | 9000885 | 9004624 | + | – | ||
n.a. | Transcription initiation factor IIE subunit alpha; TAIR: AT1G03280.1 Transcription factor TFIIE, alpha subunit; Swiss-Prot: sp|P36100|T2EA_YEAST Transcription initiation factor IIE subunit alpha; TrEMBL-Plants: tr|A0A0S3R7K1|A0A0S3R7K1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0074700 | LjG1.1_chr4 | 9544222 | 9555257 | - | – | ||
n.a. | Transcription initiation factor IIE subunit alpha; TAIR: AT1G03280.1 Transcription factor TFIIE, alpha subunit; Swiss-Prot: sp|P36100|T2EA_YEAST Transcription initiation factor IIE subunit alpha; TrEMBL-Plants: tr|I1MUG7|I1MUG7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0074700 | LjG1.1_chr4 | 9545139 | 9554936 | - | – | ||
n.a. | Transcription initiation factor IIE subunit alpha; TAIR: AT1G03280.1 Transcription factor TFIIE, alpha subunit; Swiss-Prot: sp|P36100|T2EA_YEAST Transcription initiation factor IIE subunit alpha; TrEMBL-Plants: tr|I1MUG7|I1MUG7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0074700 | LjG1.1_chr4 | 9546485 | 9554936 | - | – | ||
n.a. | Histone H1; TAIR: AT5G08780.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp|Q9FYS5|HMGYA_MAIZE HMG-Y-related protein A; TrEMBL-Plants: tr|A0A0L9VAR9|A0A0L9VAR9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0078100_LC | LjG1.1_chr4 | 10156601 | 10161204 | + | – | ||
n.a. | Histone H1; TAIR: AT5G08780.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp|Q9FYS5|HMGYA_MAIZE HMG-Y-related protein A; TrEMBL-Plants: tr|A0A072UMI4|A0A072UMI4_MEDTR Linker histone H1 and h5 family protein; Found in the gene: LotjaGi4g1v0078100_LC | LjG1.1_chr4 | 10156601 | 10161204 | + | – | ||
n.a. | Histone H1; TAIR: AT5G08780.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp|Q9FYS5|HMGYA_MAIZE HMG-Y-related protein A; TrEMBL-Plants: tr|A0A072UMI4|A0A072UMI4_MEDTR Linker histone H1 and h5 family protein; Found in the gene: LotjaGi4g1v0078100_LC | LjG1.1_chr4 | 10156601 | 10161204 | + | – | ||
n.a. | Histone H1; TAIR: AT5G08780.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp|Q9FYS5|HMGYA_MAIZE HMG-Y-related protein A; TrEMBL-Plants: tr|A0A072UMI4|A0A072UMI4_MEDTR Linker histone H1 and h5 family protein; Found in the gene: LotjaGi4g1v0078100_LC | LjG1.1_chr4 | 10156601 | 10161204 | + | – | ||
n.a. | Histone H1; TAIR: AT5G08780.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp|Q9FYS5|HMGYA_MAIZE HMG-Y-related protein A; TrEMBL-Plants: tr|A0A072UMI4|A0A072UMI4_MEDTR Linker histone H1 and h5 family protein; Found in the gene: LotjaGi4g1v0078100_LC | LjG1.1_chr4 | 10156601 | 10161204 | + | – | ||
n.a. | Histone H1; TAIR: AT5G08780.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp|Q9FYS5|HMGYA_MAIZE HMG-Y-related protein A; TrEMBL-Plants: tr|A0A072UMI4|A0A072UMI4_MEDTR Linker histone H1 and h5 family protein; Found in the gene: LotjaGi4g1v0078100_LC | LjG1.1_chr4 | 10156706 | 10161025 | + | – | ||
n.a. | Histone H1; TAIR: AT5G08780.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp|Q9FYS5|HMGYA_MAIZE HMG-Y-related protein A; TrEMBL-Plants: tr|A0A072UMI4|A0A072UMI4_MEDTR Linker histone H1 and h5 family protein; Found in the gene: LotjaGi4g1v0078100_LC | LjG1.1_chr4 | 10156779 | 10161339 | + | – | ||
n.a. | Anaphase promoting complex subunit 2; TAIR: AT2G04660.1 anaphase-promoting complex/cyclosome 2; Swiss-Prot: sp|Q8H1U5|APC2_ARATH Anaphase-promoting complex subunit 2; TrEMBL-Plants: tr|G7JG99|G7JG99_MEDTR Anaphase promoting complex subunit 2; Found in the gene: LotjaGi4g1v0090400 | LjG1.1_chr4 | 11970615 | 11979740 | + | – | ||
n.a. | Anaphase promoting complex subunit 2; TAIR: AT2G04660.1 anaphase-promoting complex/cyclosome 2; Swiss-Prot: sp|Q8H1U5|APC2_ARATH Anaphase-promoting complex subunit 2; TrEMBL-Plants: tr|G7JG99|G7JG99_MEDTR Anaphase promoting complex subunit 2; Found in the gene: LotjaGi4g1v0090400 | LjG1.1_chr4 | 11970887 | 11979055 | + | – | ||
n.a. | MYB transcription factor; TAIR: AT1G49950.1 telomere repeat binding factor 1; Swiss-Prot: sp|Q8VWK4|TRB1_ARATH Telomere repeat-binding factor 1; TrEMBL-Plants: tr|K7KPH5|K7KPH5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0094200 | LjG1.1_chr4 | 12653479 | 12667288 | + | – | ||
n.a. | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A0R0LCQ5|A0A0R0LCQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0099400 | LjG1.1_chr4 | 13480330 | 13486469 | - | – | ||
n.a. | Heat shock transcription factor; TAIR: AT4G36990.1 heat shock factor 4; Swiss-Prot: sp|P22335|HSF24_SOLPE Heat shock factor protein HSF24; TrEMBL-Plants: tr|A0A0L9TIM3|A0A0L9TIM3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0105200 | LjG1.1_chr4 | 14646159 | 14649860 | + | – | ||
n.a. | La-related protein; TAIR: AT4G35890.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp|Q94K80|LRP1C_ARATH La-related protein 1C; TrEMBL-Plants: tr|A0A0L9TP03|A0A0L9TP03_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0131900 | LjG1.1_chr4 | 19307229 | 19311094 | - | – | ||
n.a. | Transcription factor; TAIR: AT5G03415.1 Transcription factor DP; Swiss-Prot: sp|Q9FNY2|DPB_ARATH Transcription factor-like protein DPB; TrEMBL-Plants: tr|A0A151SD62|A0A151SD62_CAJCA Transcription factor Dp-1; Found in the gene: LotjaGi4g1v0140500 | LjG1.1_chr4 | 21225633 | 21240494 | - | – | ||
n.a. | 26S proteasome non-ATPase regulatory subunit; TAIR: AT4G24820.1 26S proteasome regulatory subunit Rpn7; Swiss-Prot: sp|Q93Y35|PSMD6_ARATH 26S proteasome non-ATPase regulatory subunit 6 homolog; TrEMBL-Plants: tr|A0A151TE54|A0A151TE54_CAJCA Putative 26S proteasome non-ATPase regulatory subunit 6; Found in the gene: LotjaGi4g1v0224400 | LjG1.1_chr4 | 53011759 | 53023227 | - | – | ||
n.a. | 26S proteasome non-ATPase regulatory subunit; TAIR: AT4G24820.1 26S proteasome regulatory subunit Rpn7; Swiss-Prot: sp|Q93Y35|PSMD6_ARATH 26S proteasome non-ATPase regulatory subunit 6 homolog; TrEMBL-Plants: tr|A0A151TE54|A0A151TE54_CAJCA Putative 26S proteasome non-ATPase regulatory subunit 6; Found in the gene: LotjaGi4g1v0224400 | LjG1.1_chr4 | 53012182 | 53023099 | - | – | ||
n.a. | 26S proteasome non-ATPase regulatory subunit; TAIR: AT4G24820.1 26S proteasome regulatory subunit Rpn7; Swiss-Prot: sp|Q93Y35|PSMD6_ARATH 26S proteasome non-ATPase regulatory subunit 6 homolog; TrEMBL-Plants: tr|A0A151TE54|A0A151TE54_CAJCA Putative 26S proteasome non-ATPase regulatory subunit 6; Found in the gene: LotjaGi4g1v0224400 | LjG1.1_chr4 | 53012479 | 53022131 | - | – | ||
n.a. | E2F transcription factor; TAIR: AT3G48160.2 DP-E2F-like 1; Swiss-Prot: sp|Q8LSZ4|E2FE_ARATH E2F transcription factor-like E2FE; TrEMBL-Plants: tr|A0A151R8W6|A0A151R8W6_CAJCA Transcription factor E2F7; Found in the gene: LotjaGi4g1v0236800 | LjG1.1_chr4 | 55161128 | 55165521 | + | – | ||
n.a. | Replication protein A subunit; TAIR: AT3G02920.1 Replication protein A, subunit RPA32; Swiss-Prot: sp|Q8LFJ8|RFA2B_ARATH Replication protein A 32 kDa subunit B; TrEMBL-Plants: tr|A0A151SRU2|A0A151SRU2_CAJCA Replication factor A protein 2; Found in the gene: LotjaGi4g1v0301800 | LjG1.1_chr4 | 67675579 | 67679830 | + | – | ||
n.a. | Heat shock transcription factor; TAIR: AT2G26150.1 heat shock transcription factor A2; Swiss-Prot: sp|P41152|HSF30_SOLPE Heat shock factor protein HSF30; TrEMBL-Plants: tr|V7CBJ1|V7CBJ1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0310700 | LjG1.1_chr4 | 68692458 | 68694870 | + | – | ||
n.a. | Eukaryotic translation initiation factor 3 subunit K; TAIR: AT4G33250.1 eukaryotic translation initiation factor 3K; Swiss-Prot: sp|Q94HF1|EIF3K_ORYSJ Eukaryotic translation initiation factor 3 subunit K; TrEMBL-Plants: tr|I3SP58|I3SP58_LOTJA Eukaryotic translation initiation factor 3 subunit K; Found in the gene: LotjaGi4g1v0320000 | LjG1.1_chr4 | 69764391 | 69767820 | - | – | ||
n.a. | Eukaryotic translation initiation factor 3 subunit K; TAIR: AT4G33250.1 eukaryotic translation initiation factor 3K; Swiss-Prot: sp|Q94HF1|EIF3K_ORYSJ Eukaryotic translation initiation factor 3 subunit K; TrEMBL-Plants: tr|I3SP58|I3SP58_LOTJA Eukaryotic translation initiation factor 3 subunit K; Found in the gene: LotjaGi4g1v0320000 | LjG1.1_chr4 | 69765108 | 69767701 | - | – | ||
n.a. | Cullin-1; TAIR: AT4G02570.1 cullin 1; Swiss-Prot: sp|Q94AH6|CUL1_ARATH Cullin-1; TrEMBL-Plants: tr|I1MRG8|I1MRG8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0344300 | LjG1.1_chr4 | 72419983 | 72427534 | + | – | ||
n.a. | Cullin-1; TAIR: AT4G02570.1 cullin 1; Swiss-Prot: sp|Q94AH6|CUL1_ARATH Cullin-1; TrEMBL-Plants: tr|I1MRG8|I1MRG8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0344300 | LjG1.1_chr4 | 72420018 | 72426572 | + | – | ||
n.a. | Cullin-1; TAIR: AT4G02570.1 cullin 1; Swiss-Prot: sp|Q94AH6|CUL1_ARATH Cullin-1; TrEMBL-Plants: tr|I1MRG8|I1MRG8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0344300 | LjG1.1_chr4 | 72420025 | 72426572 | + | – | ||
n.a. | Cullin-1; TAIR: AT4G02570.1 cullin 1; Swiss-Prot: sp|Q94AH6|CUL1_ARATH Cullin-1; TrEMBL-Plants: tr|I1MRG8|I1MRG8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0344300 | LjG1.1_chr4 | 72420316 | 72426572 | + | – | ||
n.a. | Cullin-1; TAIR: AT4G02570.1 cullin 1; Swiss-Prot: sp|Q94AH6|CUL1_ARATH Cullin-1; TrEMBL-Plants: tr|A0A072USG4|A0A072USG4_MEDTR Cullin 3B; Found in the gene: LotjaGi4g1v0344300 | LjG1.1_chr4 | 72426109 | 72426572 | + | – | ||
n.a. | Heat Stress Transcription Factor family protein; TAIR: AT4G13980.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp|Q94BZ5|HSFA5_ARATH Heat stress transcription factor A-5; TrEMBL-Plants: tr|I1K3S2|I1K3S2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0371300 | LjG1.1_chr4 | 75071439 | 75075674 | + | – | ||
n.a. | Heat shock transcription factor; TAIR: AT4G18880.1 heat shock transcription factor A4A; Swiss-Prot: sp|O49403|HFA4A_ARATH Heat stress transcription factor A-4a; TrEMBL-Plants: tr|R9R6C4|R9R6C4_9FABA Heat stress transcription factor A-4a-like protein; Found in the gene: LotjaGi4g1v0381000 | LjG1.1_chr4 | 75995795 | 76001066 | - | – | ||
n.a. | 26S proteasome non-ATPase regulatory subunit; TAIR: AT5G09900.2 26S proteasome regulatory subunit, putative (RPN5); Swiss-Prot: sp|Q9FIB6|PS12A_ARATH 26S proteasome non-ATPase regulatory subunit 12 homolog A; TrEMBL-Plants: tr|V7CNL2|V7CNL2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0405800 | LjG1.1_chr4 | 78210282 | 78216708 | + | – |