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IPR010908

Source: InterPro

Description

IPR010908 is a Longin domain.

<p>VAMPs (and its homologue synaptobrevins) define a group of SNARE proteins that contain a C-terminal coiled-coil/SNARE domain, in combination with variable N-terminal domains that are used to classify VAMPs: those containing longin N-terminal domains (~150 aa) are referred to as longins, while those with shorter N-termini are referred to as brevins [[cite:PUB00013945]]. Longins are the only type of VAMP protein found in all eukaryotes, suggesting that their longin domain is essential. The longin domain is thought to exert a regulatory function. Longin domains have been shown to share the same structural fold, a profilin-like globular domain consisting of a five-stranded antiparallel β-sheet that is sandwiched by an α-helix on one side, and two α-helices on the other (β(2)-α-β(3)-α(2)).</p> <p>This domain is also found in phytolongins, non-SNARE longin proteins involved in membrane-trafficking machinery.</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 50

Transcript Name Description Predicted domains Domain count
Lj0g3v0321629.1
– PREDICTED: vesicle-associated membrane protein 725-like [Glycine max] gi|356567876|ref|XP_003552141.1|
Domains
20
Lj1g3v3478250.1
– Vesicle-associated membrane protein [Medicago truncatula] gi|357505361|ref|XP_003622969.1|
Domains
22
Lj2g3v3022900.1
– PREDICTED: vesicle-associated membrane protein 711-like [Cicer arietinum] gi|502098408|ref|XP_004491228.1|
Domains
21
Lj3g3v1789090.1
– PREDICTED: probable VAMP-like protein At1g33475-like [Cicer arietinum] gi|502136366|ref|XP_004502660.1|
Domains
6
Lj3g3v1953410.1
– PREDICTED: probable VAMP-like protein At1g33475-like [Glycine max] gi|356517810|ref|XP_003527579.1|
Domains
8
Lj3g3v2576210.1
– PREDICTED: 25.3 kDa vesicle transport protein-like isoform X1 [Cicer arietinum] gi|502156568|ref|XP_004510539.1|
Domains
19
Lj3g3v2990300.1
– PREDICTED: vesicle-associated membrane protein 714-like [Cicer arietinum] gi|502145830|ref|XP_004506198.1|
Domains
22
Lj4g3v1881960.1
– PREDICTED: vesicle-associated membrane protein 713-like [Cicer arietinum] gi|502151469|ref|XP_004508456.1|
Domains
16
Lj4g3v2336850.1
– PREDICTED: vesicle-associated membrane protein 724-like [Cicer arietinum] gi|502085197|ref|XP_004487861.1|
Domains
7
Lj5g3v2237620.1
– PREDICTED: vesicle-associated membrane protein 727-like [Glycine max] gi|356575504|ref|XP_003555880.1|
Domains
17
Lj6g3v0132830.1
– Vesicle-associated membrane protein 7B [Arabidopsis lyrata subsp]. lyrata] gi|297843284|ref|XP_002889523.1|
Domains
20
Lj6g3v1078510.1
– Fiber NTGP1-related protein [Gossypium barbadense] gi|35187452|gb|AAQ84317.1|
Domains
16
Lj6g3v1444530.1
– PREDICTED: vesicle-associated membrane protein 724-like [Cicer arietinum] gi|502085197|ref|XP_004487861.1|
Domains
17
Lj6g3v1692680.1
– Vesicle-associated membrane protein [Medicago truncatula] gi|357448351|ref|XP_003594451.1|
Domains
21
LotjaGi1g1v0050900.1
– Vesicle-associated membrane protein; TAIR: AT5G11150.1 vesicle-associated membrane protein 713; Swiss-Prot: sp|Q9LFP1|VA713_ARATH Vesicle-associated membrane protein 713; TrEMBL-Plants: tr|I3S1N5|I3S1N5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0050900
Domains
23
LotjaGi1g1v0050900.2
– Vesicle-associated membrane protein; TAIR: AT4G32150.1 vesicle-associated membrane protein 711; Swiss-Prot: sp|O49377|VA711_ARATH Vesicle-associated membrane protein 711; TrEMBL-Plants: tr|I3S1N5|I3S1N5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0050900
Domains
24
LotjaGi1g1v0585300.1
– Vesicle-associated membrane protein, putative; TAIR: AT1G04760.1 vesicle-associated membrane protein 726; Swiss-Prot: sp|Q9MAS5|VA726_ARATH Putative vesicle-associated membrane protein 726; TrEMBL-Plants: tr|A0A067J992|A0A067J992_JATCU Uncharacterized protein; Found in the gene: LotjaGi1g1v0585300
Domains
24
LotjaGi1g1v0585300.2
– Vesicle-associated membrane protein, putative; TAIR: AT1G04760.1 vesicle-associated membrane protein 726; Swiss-Prot: sp|Q9MAS5|VA726_ARATH Putative vesicle-associated membrane protein 726; TrEMBL-Plants: tr|W9S386|W9S386_9ROSA Putative vesicle-associated membrane protein 726; Found in the gene: LotjaGi1g1v0585300
Domains
23
LotjaGi1g1v0585500.1
– Vesicle-associated membrane protein, putative; TAIR: AT1G04760.1 vesicle-associated membrane protein 726; Swiss-Prot: sp|Q9MAS5|VA726_ARATH Putative vesicle-associated membrane protein 726; TrEMBL-Plants: tr|A0A151RCJ5|A0A151RCJ5_CAJCA Putative vesicle-associated membrane protein 726 family; Found in the gene: LotjaGi1g1v0585500
Domains
22
LotjaGi3g1v0232700.1
– Vesicle-associated membrane protein, putative; TAIR: AT1G04760.1 vesicle-associated membrane protein 726; Swiss-Prot: sp|Q9MAS5|VA726_ARATH Putative vesicle-associated membrane protein 726; TrEMBL-Plants: tr|I3SKD7|I3SKD7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0232700
Domains
24
LotjaGi3g1v0333000.1
– Vesicle-associated membrane family protein; TAIR: AT4G10170.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q9SN26|PHL11_ARATH Phytolongin Phyl1.1; TrEMBL-Plants: tr|A0A0B2QG88|A0A0B2QG88_GLYSO Putative VAMP-like protein; Found in the gene: LotjaGi3g1v0333000
Domains
13
LotjaGi3g1v0333000.2
– Vesicle-associated membrane family protein; TAIR: AT4G10170.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q9SN26|PHL11_ARATH Phytolongin Phyl1.1; TrEMBL-Plants: tr|A0A0B2QG88|A0A0B2QG88_GLYSO Putative VAMP-like protein; Found in the gene: LotjaGi3g1v0333000
Domains
13
LotjaGi3g1v0333000.3
– Vesicle-associated membrane family protein; TAIR: AT4G10170.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q9SN26|PHL11_ARATH Phytolongin Phyl1.1; TrEMBL-Plants: tr|A0A0B2QG88|A0A0B2QG88_GLYSO Putative VAMP-like protein; Found in the gene: LotjaGi3g1v0333000
Domains
13
LotjaGi3g1v0411200.1
– Vesicle transport protein-like; TAIR: AT1G11890.1 Synaptobrevin family protein; Swiss-Prot: sp|Q94AU2|SEC22_ARATH 25.3 kDa vesicle transport protein; TrEMBL-Plants: tr|I3SIK6|I3SIK6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0411200
Domains
21
LotjaGi3g1v0411200.2
– Vesicle transport protein-like; TAIR: AT1G11890.1 Synaptobrevin family protein; Swiss-Prot: sp|Q94AU2|SEC22_ARATH 25.3 kDa vesicle transport protein; TrEMBL-Plants: tr|I3SIK6|I3SIK6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0411200
Domains
21
LotjaGi3g1v0475300.1
– Vesicle-associated membrane protein, putative; TAIR: AT5G22360.1 vesicle-associated membrane protein 714; Swiss-Prot: sp|Q9FMR5|VA714_ARATH Vesicle-associated membrane protein 714; TrEMBL-Plants: tr|V7AFW3|V7AFW3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0475300
Domains
23
LotjaGi3g1v0475300.4
– Vesicle-associated membrane protein, putative; TAIR: AT5G22360.1 vesicle-associated membrane protein 714; Swiss-Prot: sp|Q9FMR5|VA714_ARATH Vesicle-associated membrane protein 714; TrEMBL-Plants: tr|V7AFW3|V7AFW3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0475300
Domains
24
LotjaGi4g1v0085100.1
– Vesicle-associated membrane protein, putative; TAIR: AT1G04760.1 vesicle-associated membrane protein 726; Swiss-Prot: sp|Q9MAS5|VA726_ARATH Putative vesicle-associated membrane protein 726; TrEMBL-Plants: tr|B7FGH4|B7FGH4_MEDTR Synaptobrevin-like protein; Found in the gene: LotjaGi4g1v0085100
Domains
23
LotjaGi4g1v0085100.2
– Vesicle-associated membrane protein, putative; TAIR: AT1G04760.1 vesicle-associated membrane protein 726; Swiss-Prot: sp|Q9MAS5|VA726_ARATH Putative vesicle-associated membrane protein 726; TrEMBL-Plants: tr|B7FGH4|B7FGH4_MEDTR Synaptobrevin-like protein; Found in the gene: LotjaGi4g1v0085100
Domains
13
LotjaGi4g1v0085100.3
– Vesicle-associated membrane protein, putative; TAIR: AT1G04760.1 vesicle-associated membrane protein 726; Swiss-Prot: sp|Q9MAS5|VA726_ARATH Putative vesicle-associated membrane protein 726; TrEMBL-Plants: tr|B7FGH4|B7FGH4_MEDTR Synaptobrevin-like protein; Found in the gene: LotjaGi4g1v0085100
Domains
23
LotjaGi4g1v0085100.4
– Vesicle-associated membrane protein, putative; TAIR: AT1G04760.1 vesicle-associated membrane protein 726; Swiss-Prot: sp|Q9MAS5|VA726_ARATH Putative vesicle-associated membrane protein 726; TrEMBL-Plants: tr|B7FGH4|B7FGH4_MEDTR Synaptobrevin-like protein; Found in the gene: LotjaGi4g1v0085100
Domains
19
LotjaGi4g1v0085100.5
– Vesicle-associated membrane protein, putative; TAIR: AT1G04760.1 vesicle-associated membrane protein 726; Swiss-Prot: sp|Q9MAS5|VA726_ARATH Putative vesicle-associated membrane protein 726; TrEMBL-Plants: tr|B7FGH4|B7FGH4_MEDTR Synaptobrevin-like protein; Found in the gene: LotjaGi4g1v0085100
Domains
23
LotjaGi4g1v0275600.1
– Vesicle-associated membrane protein, putative; TAIR: AT4G32150.1 vesicle-associated membrane protein 711; Swiss-Prot: sp|O49377|VA711_ARATH Vesicle-associated membrane protein 711; TrEMBL-Plants: tr|I3T6Y7|I3T6Y7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0275600
Domains
10
LotjaGi4g1v0275600.2
– Vesicle-associated membrane protein; TAIR: AT5G11150.1 vesicle-associated membrane protein 713; Swiss-Prot: sp|Q9LFP1|VA713_ARATH Vesicle-associated membrane protein 713; TrEMBL-Plants: tr|I3T6Y7|I3T6Y7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0275600
Domains
23
LotjaGi4g1v0342200.1
– Vesicle-associated membrane protein; TAIR: AT4G15780.1 vesicle-associated membrane protein 724; Swiss-Prot: sp|O23429|VA724_ARATH Vesicle-associated membrane protein 724; TrEMBL-Plants: tr|A0A151STH9|A0A151STH9_CAJCA Vesicle-associated membrane protein 724 family; Found in the gene: LotjaGi4g1v0342200
Domains
23
LotjaGi4g1v0342200.2
– Vesicle-associated membrane protein; TAIR: AT4G15780.1 vesicle-associated membrane protein 724; Swiss-Prot: sp|O23429|VA724_ARATH Vesicle-associated membrane protein 724; TrEMBL-Plants: tr|I3SDA5|I3SDA5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0342200
Domains
23
LotjaGi5g1v0301600_LC.1
– Vesicle transport protein-like; TAIR: AT5G52270.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q94AU2|SEC22_ARATH 25.3 kDa vesicle transport protein; TrEMBL-Plants: tr|A0A0R0I7M3|A0A0R0I7M3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0301600_LC
Domains
10
LotjaGi5g1v0343800.1
– Vesicle-associated membrane protein, putative; TAIR: AT3G54300.1 vesicle-associated membrane protein 727; Swiss-Prot: sp|Q9M376|VA727_ARATH Vesicle-associated membrane protein 727; TrEMBL-Plants: tr|I1LF04|I1LF04_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0343800
Domains
23
LotjaGi5g1v0343800.2
– Vesicle-associated membrane protein, putative; TAIR: AT3G54300.1 vesicle-associated membrane protein 727; Swiss-Prot: sp|Q9M376|VA727_ARATH Vesicle-associated membrane protein 727; TrEMBL-Plants: tr|I1LF04|I1LF04_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0343800
Domains
23
LotjaGi5g1v0343800.3
– Vesicle-associated membrane protein, putative; TAIR: AT3G54300.1 vesicle-associated membrane protein 727; Swiss-Prot: sp|Q9M376|VA727_ARATH Vesicle-associated membrane protein 727; TrEMBL-Plants: tr|A0A1J7GS43|A0A1J7GS43_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0343800
Domains
18
LotjaGi6g1v0014900.1
– Vesicle-associated membrane protein, putative; TAIR: AT1G04760.1 vesicle-associated membrane protein 726; Swiss-Prot: sp|Q9MAS5|VA726_ARATH Putative vesicle-associated membrane protein 726; TrEMBL-Plants: tr|I1NEG8|I1NEG8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0014900
Domains
23
LotjaGi6g1v0014900.2
– Vesicle-associated membrane protein, putative; TAIR: AT1G04760.1 vesicle-associated membrane protein 726; Swiss-Prot: sp|Q9MAS5|VA726_ARATH Putative vesicle-associated membrane protein 726; TrEMBL-Plants: tr|I1NEG8|I1NEG8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0014900
Domains
23
LotjaGi6g1v0205500.1
– Vesicle-associated membrane protein; TAIR: AT5G58060.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q9ZRD6|YKT61_ARATH VAMP-like protein YKT61; TrEMBL-Plants: tr|I3T6A4|I3T6A4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0205500
Domains
22
LotjaGi6g1v0205500.2
– Vesicle-associated membrane protein; TAIR: AT5G58060.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q9ZRD6|YKT61_ARATH VAMP-like protein YKT61; TrEMBL-Plants: tr|I3T6A4|I3T6A4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0205500
Domains
22
LotjaGi6g1v0205500.3
– VAMP-like protein YKT61; TAIR: AT5G58060.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q9ZRD6|YKT61_ARATH VAMP-like protein YKT61; TrEMBL-Plants: tr|A0A0B2S5Y3|A0A0B2S5Y3_GLYSO VAMP-like protein YKT61; Found in the gene: LotjaGi6g1v0205500
Domains
21
LotjaGi6g1v0248900.1
– Vesicle-associated membrane protein, putative; TAIR: AT4G15780.1 vesicle-associated membrane protein 724; Swiss-Prot: sp|O23429|VA724_ARATH Vesicle-associated membrane protein 724; TrEMBL-Plants: tr|I3SDA5|I3SDA5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0248900
Domains
23
LotjaGi6g1v0248900.2
– Vesicle-associated membrane protein; TAIR: AT4G15780.1 vesicle-associated membrane protein 724; Swiss-Prot: sp|O23429|VA724_ARATH Vesicle-associated membrane protein 724; TrEMBL-Plants: tr|I3SDA5|I3SDA5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0248900
Domains
19
LotjaGi6g1v0276400.1
– Vesicle-associated membrane protein, putative; TAIR: AT1G04760.1 vesicle-associated membrane protein 726; Swiss-Prot: sp|Q9MAS5|VA726_ARATH Putative vesicle-associated membrane protein 726; TrEMBL-Plants: tr|I3S869|I3S869_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0276400
Domains
23
LotjaGi6g1v0276400.2
– Vesicle-associated membrane protein, putative; TAIR: AT1G04760.1 vesicle-associated membrane protein 726; Swiss-Prot: sp|Q9MAS5|VA726_ARATH Putative vesicle-associated membrane protein 726; TrEMBL-Plants: tr|I3S869|I3S869_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0276400
Domains
21
LotjaGi6g1v0276400.3
– Vesicle-associated membrane protein, putative; TAIR: AT2G33120.2 synaptobrevin-related protein 1; Swiss-Prot: sp|P47192|VA722_ARATH Vesicle-associated membrane protein 722; TrEMBL-Plants: tr|I3S869|I3S869_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0276400
Domains
17

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd15843 CDD 1 2.00