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The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.
We have found 197 results. Now displaying 3 of 4 with 50 rows per page. This search has taken 5.474s to perform.
Transcript | Name | Description | Chr | Start | End | Strand | Domain predictions | GO predictions |
---|---|---|---|---|---|---|---|---|
n.a. | FACT complex subunit SPT16; TAIR: AT4G10710.1 global transcription factor C; Swiss-Prot: sp|O82491|SPT16_ARATH FACT complex subunit SPT16; TrEMBL-Plants: tr|A0A1J7H1L5|A0A1J7H1L5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0481300 | LjG1.1_chr1 | 99460332 | 99464115 | + | – | ||
n.a. | FACT complex subunit SPT16; TAIR: AT4G10710.1 global transcription factor C; Swiss-Prot: sp|O82491|SPT16_ARATH FACT complex subunit SPT16; TrEMBL-Plants: tr|A0A1J7H1L5|A0A1J7H1L5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0481300 | LjG1.1_chr1 | 99460373 | 99464115 | + | – | ||
n.a. | FACT complex subunit SSRP1; TAIR: AT3G28730.1 high mobility group; Swiss-Prot: sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1; TrEMBL-Plants: tr|I1J7R6|I1J7R6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0589200_LC | LjG1.1_chr1 | 112948086 | 112952014 | + | – | ||
n.a. | FACT complex subunit SSRP1; TAIR: AT3G28730.1 high mobility group; Swiss-Prot: sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1; TrEMBL-Plants: tr|I1J7R6|I1J7R6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0589200_LC | LjG1.1_chr1 | 112948149 | 112952001 | + | – | ||
n.a. | GRAM domain protein/ABA-responsive-like protein; TAIR: AT5G13200.1 GRAM domain family protein; Swiss-Prot: sp|Q9LYV6|GEML5_ARATH GEM-like protein 5; TrEMBL-Plants: tr|I3TA12|I3TA12_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0631000 | LjG1.1_chr1 | 118455156 | 118460039 | - | – | ||
n.a. | mRNA-decapping enzyme-like protein; TAIR: AT1G08370.1 decapping 1; Swiss-Prot: sp|Q9SJF3|DCP1_ARATH mRNA-decapping enzyme-like protein; TrEMBL-Plants: tr|A0A151S1B1|A0A151S1B1_CAJCA mRNA-decapping enzyme-like protein; Found in the gene: LotjaGi1g1v0733900 | LjG1.1_chr1 | 130728770 | 130735223 | + | – | ||
n.a. | FACT complex subunit SSRP1; TAIR: AT3G28730.1 high mobility group; Swiss-Prot: sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1; TrEMBL-Plants: tr|I1J7R6|I1J7R6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0081600 | LjG1.1_chr2 | 22249439 | 22255186 | + | – | ||
n.a. | FACT complex subunit SSRP1; TAIR: AT3G28730.1 high mobility group; Swiss-Prot: sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1; TrEMBL-Plants: tr|A0A0L9VP68|A0A0L9VP68_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0081600 | LjG1.1_chr2 | 22249879 | 22253455 | + | – | ||
n.a. | FACT complex subunit SSRP1; TAIR: AT3G28730.1 high mobility group; Swiss-Prot: sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1; TrEMBL-Plants: tr|I1J7R6|I1J7R6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0081600 | LjG1.1_chr2 | 22249879 | 22254544 | + | – | ||
n.a. | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G42140.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr|A0A0S3TAW6|A0A0S3TAW6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0134600 | LjG1.1_chr2 | 48800529 | 48812331 | - | – | ||
n.a. | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; TAIR: AT5G42140.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr|I1JDG4|I1JDG4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0134600 | LjG1.1_chr2 | 48801389 | 48810020 | - | – | ||
n.a. | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; TAIR: AT5G42140.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr|I1JDG4|I1JDG4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0134600 | LjG1.1_chr2 | 48802245 | 48810028 | - | – | ||
n.a. | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; TAIR: AT5G42140.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr|K7K743|K7K743_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0134600 | LjG1.1_chr2 | 48802439 | 48810020 | - | – | ||
n.a. | Myotubularin; TAIR: AT3G10550.1 Myotubularin-like phosphatases II superfamily; Swiss-Prot: sp|F4J3T8|MYTM1_ARATH Phosphatidylinositol-3-phosphatase myotubularin-1; TrEMBL-Plants: tr|V7BH90|V7BH90_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0157200 | LjG1.1_chr2 | 55643415 | 55657924 | - | – | ||
n.a. | GRAM domain protein/ABA-responsive-like protein; TAIR: AT5G23370.1 GRAM domain-containing protein / ABA-responsive protein-like protein; Swiss-Prot: sp|Q9FMW4|GEML8_ARATH Putative GEM-like protein 8; TrEMBL-Plants: tr|G7KKC8|G7KKC8_MEDTR GRAM domain protein/ABA-responsive-like protein; Found in the gene: LotjaGi2g1v0178700 | LjG1.1_chr2 | 60020592 | 60023374 | - | – | ||
n.a. | FACT complex subunit SSRP1; TAIR: AT3G28730.1 high mobility group; Swiss-Prot: sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1; TrEMBL-Plants: tr|I1J7R6|I1J7R6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0256800 | LjG1.1_chr2 | 72298284 | 72304237 | - | – | ||
n.a. | FACT complex subunit SSRP1; TAIR: AT3G28730.1 high mobility group; Swiss-Prot: sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1; TrEMBL-Plants: tr|A0A151S4Y7|A0A151S4Y7_CAJCA FACT complex subunit SSRP1; Found in the gene: LotjaGi2g1v0256800 | LjG1.1_chr2 | 72298562 | 72304104 | - | – | ||
n.a. | FACT complex subunit SSRP1; TAIR: AT3G28730.1 high mobility group; Swiss-Prot: sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1; TrEMBL-Plants: tr|A0A0R0KM01|A0A0R0KM01_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0256800 | LjG1.1_chr2 | 72298894 | 72303480 | - | – | ||
n.a. | FACT complex subunit SSRP1; TAIR: AT3G28730.1 high mobility group; Swiss-Prot: sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1; TrEMBL-Plants: tr|I1J7R6|I1J7R6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0256800 | LjG1.1_chr2 | 72298894 | 72303480 | - | – | ||
n.a. | ENHANCED DISEASE RESISTANCE 2; TAIR: AT4G19040.1 ENHANCED DISEASE RESISTANCE 2; Swiss-Prot: sp|F4JSE7|EDR2_ARATH Protein ENHANCED DISEASE RESISTANCE 2; TrEMBL-Plants: tr|A0A0L9UR75|A0A0L9UR75_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0341500 | LjG1.1_chr2 | 81850736 | 81864885 | - | – | ||
n.a. | ENHANCED DISEASE RESISTANCE 2; TAIR: AT4G19040.1 ENHANCED DISEASE RESISTANCE 2; Swiss-Prot: sp|F4JSE7|EDR2_ARATH Protein ENHANCED DISEASE RESISTANCE 2; TrEMBL-Plants: tr|A0A0L9UR75|A0A0L9UR75_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0341500 | LjG1.1_chr2 | 81852637 | 81864393 | - | – | ||
n.a. | ENHANCED DISEASE RESISTANCE 2; TAIR: AT4G19040.1 ENHANCED DISEASE RESISTANCE 2; Swiss-Prot: sp|F4JSE7|EDR2_ARATH Protein ENHANCED DISEASE RESISTANCE 2; TrEMBL-Plants: tr|A0A0L9UR75|A0A0L9UR75_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0341500 | LjG1.1_chr2 | 81852842 | 81864393 | - | – | ||
n.a. | Kinesin-like protein; TAIR: AT5G65930.2 kinesin-like calmodulin-binding protein (ZWICHEL); Swiss-Prot: sp|Q7XPJ0|KN14I_ORYSJ Kinesin-like protein KIN-14I; TrEMBL-Plants: tr|I1J891|I1J891_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0351000 | LjG1.1_chr2 | 82734093 | 82743835 | + | – | ||
n.a. | Kinesin-like protein; TAIR: AT5G65930.2 kinesin-like calmodulin-binding protein (ZWICHEL); Swiss-Prot: sp|Q7XPJ0|KN14I_ORYSJ Kinesin-like protein KIN-14I; TrEMBL-Plants: tr|I1J891|I1J891_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0351000 | LjG1.1_chr2 | 82734941 | 82743560 | + | – | ||
n.a. | Pleckstrin (PH) domain-containing protein isoform 2; TAIR: AT4G17140.3 pleckstrin homology (PH) domain-containing protein; Swiss-Prot: sp|Q8BX70|VP13C_MOUSE Vacuolar protein sorting-associated protein 13C; TrEMBL-Plants: tr|G7JYP4|G7JYP4_MEDTR Vacuolar protein sorting protein; Found in the gene: LotjaGi2g1v0417400 | LjG1.1_chr2 | 91545297 | 91593826 | - | – | ||
n.a. | Nuclear pore complex protein Nup50; TAIR: AT4G11790.1 Pleckstrin homology (PH) domain superfamily protein; Swiss-Prot: sp|Q9JIH2|NUP50_MOUSE Nuclear pore complex protein Nup50; TrEMBL-Plants: tr|A0A061G427|A0A061G427_THECC Pleckstrin domain superfamily protein isoform 1; Found in the gene: LotjaGi2g1v0431100 | LjG1.1_chr2 | 92800416 | 92805314 | - | – | ||
n.a. | Nuclear pore complex protein Nup50; TAIR: AT4G11790.1 Pleckstrin homology (PH) domain superfamily protein; Swiss-Prot: sp|Q9JIH2|NUP50_MOUSE Nuclear pore complex protein Nup50; TrEMBL-Plants: tr|A0A061G427|A0A061G427_THECC Pleckstrin domain superfamily protein isoform 1; Found in the gene: LotjaGi2g1v0431100 | LjG1.1_chr2 | 92800560 | 92804663 | - | – | ||
n.a. | Nuclear pore complex protein Nup50; TAIR: AT4G11790.1 Pleckstrin homology (PH) domain superfamily protein; Swiss-Prot: sp|Q9JIH2|NUP50_MOUSE Nuclear pore complex protein Nup50; TrEMBL-Plants: tr|I1LGI3|I1LGI3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0431100 | LjG1.1_chr2 | 92800560 | 92805236 | - | – | ||
n.a. | Nuclear pore complex protein Nup50; TAIR: AT4G11790.1 Pleckstrin homology (PH) domain superfamily protein; Swiss-Prot: sp|Q9JIH2|NUP50_MOUSE Nuclear pore complex protein Nup50; TrEMBL-Plants: tr|I1LGI3|I1LGI3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0431100 | LjG1.1_chr2 | 92800882 | 92804646 | - | – | ||
n.a. | Pleckstrin-like (PH) domain protein; TAIR: AT4G23895.1 Pleckstrin homology (PH) domain-containing protein; Swiss-Prot: sp|P71404|CLPB_HELPY Chaperone protein ClpB; TrEMBL-Plants: tr|I3SRK6|I3SRK6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0441300 | LjG1.1_chr2 | 93762946 | 93766578 | - | – | ||
n.a. | Pleckstrin-like (PH) domain protein; TAIR: AT4G23895.1 Pleckstrin homology (PH) domain-containing protein; Swiss-Prot: sp|P71404|CLPB_HELPY Chaperone protein ClpB; TrEMBL-Plants: tr|I3SRK6|I3SRK6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0441300 | LjG1.1_chr2 | 93763366 | 93765293 | - | – | ||
n.a. | Ran-binding protein 1 domain-containing; TAIR: AT1G52380.1 NUP50 (Nucleoporin 50 kDa) protein; Swiss-Prot: sp|Q9C829|NU50A_ARATH Nuclear pore complex protein NUP50A; TrEMBL-Plants: tr|A0A0B2NU93|A0A0B2NU93_GLYSO E3 SUMO-protein ligase RanBP2; Found in the gene: LotjaGi3g1v0015500 | LjG1.1_chr3 | 1638046 | 1641772 | - | – | ||
n.a. | Dynamin homolog; TAIR: AT1G59610.1 dynamin-like 3; Swiss-Prot: sp|Q9LQ55|DRP2B_ARATH Dynamin-2B; TrEMBL-Plants: tr|Q9SDX4|Q9SDX4_ASTSI Dynamin homolog; Found in the gene: LotjaGi3g1v0054800 | LjG1.1_chr3 | 5716872 | 5729123 | - | – | ||
n.a. | GRAM domain family protein; TAIR: AT1G02120.1 GRAM domain family protein; Swiss-Prot: sp|F4HVW5|VAD1_ARATH Protein VASCULAR ASSOCIATED DEATH 1, chloroplastic; TrEMBL-Plants: tr|A0A072TWG7|A0A072TWG7_MEDTR PH-GRAM1-TCB1D9-TCB1D9B domain protein; Found in the gene: LotjaGi3g1v0067300 | LjG1.1_chr3 | 7288362 | 7302896 | + | – | ||
n.a. | GRAM domain family protein; TAIR: AT1G02120.1 GRAM domain family protein; Swiss-Prot: sp|F4HVW5|VAD1_ARATH Protein VASCULAR ASSOCIATED DEATH 1, chloroplastic; TrEMBL-Plants: tr|A0A072TJX9|A0A072TJX9_MEDTR PH-GRAM1-TCB1D9-TCB1D9B domain protein; Found in the gene: LotjaGi3g1v0067300 | LjG1.1_chr3 | 7288362 | 7302896 | + | – | ||
n.a. | GRAM domain family protein; TAIR: AT1G02120.1 GRAM domain family protein; Swiss-Prot: sp|F4HVW5|VAD1_ARATH Protein VASCULAR ASSOCIATED DEATH 1, chloroplastic; TrEMBL-Plants: tr|A0A072TJX9|A0A072TJX9_MEDTR PH-GRAM1-TCB1D9-TCB1D9B domain protein; Found in the gene: LotjaGi3g1v0067300 | LjG1.1_chr3 | 7288374 | 7302557 | + | – | ||
n.a. | GRAM domain family protein; TAIR: AT1G02120.1 GRAM domain family protein; Swiss-Prot: sp|F4HVW5|VAD1_ARATH Protein VASCULAR ASSOCIATED DEATH 1, chloroplastic; TrEMBL-Plants: tr|A0A072TWG7|A0A072TWG7_MEDTR PH-GRAM1-TCB1D9-TCB1D9B domain protein; Found in the gene: LotjaGi3g1v0067300 | LjG1.1_chr3 | 7288375 | 7302383 | + | – | ||
n.a. | Pleckstrin-like (PH) and lipid-binding START domain protein; TAIR: AT2G28320.1 Pleckstrin homology (PH) and lipid-binding START domains-containing protein; Swiss-Prot: sp|F4JSE7|EDR2_ARATH Protein ENHANCED DISEASE RESISTANCE 2; TrEMBL-Plants: tr|A0A151S5D4|A0A151S5D4_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0164200 | LjG1.1_chr3 | 22335591 | 22347486 | - | – | ||
n.a. | Pleckstrin-like (PH) and lipid-binding START domain protein; TAIR: AT2G28320.1 Pleckstrin homology (PH) and lipid-binding START domains-containing protein; Swiss-Prot: sp|F4JSE7|EDR2_ARATH Protein ENHANCED DISEASE RESISTANCE 2; TrEMBL-Plants: tr|A0A151S5D4|A0A151S5D4_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0164200 | LjG1.1_chr3 | 22335591 | 22347486 | - | – | ||
n.a. | mRNA-decapping enzyme-like protein; TAIR: AT1G08370.1 decapping 1; Swiss-Prot: sp|Q9SJF3|DCP1_ARATH mRNA-decapping enzyme-like protein; TrEMBL-Plants: tr|A0A1J7I5L7|A0A1J7I5L7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0180000 | LjG1.1_chr3 | 25051850 | 25060075 | + | – | ||
n.a. | Vacuolar protein sorting-associated protein 36; TAIR: AT5G04920.1 EAP30/Vps36 family protein; Swiss-Prot: sp|Q9FF81|VPS36_ARATH Vacuolar protein sorting-associated protein 36; TrEMBL-Plants: tr|V7AJ01|V7AJ01_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0303100 | LjG1.1_chr3 | 63245138 | 63253073 | - | – | ||
n.a. | Vacuolar protein sorting-associated protein 36; TAIR: AT5G04920.1 EAP30/Vps36 family protein; Swiss-Prot: sp|Q9FF81|VPS36_ARATH Vacuolar protein sorting-associated protein 36; TrEMBL-Plants: tr|V7AJ01|V7AJ01_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0303100 | LjG1.1_chr3 | 63246919 | 63253069 | - | – | ||
n.a. | Vacuolar protein sorting-associated protein 36; TAIR: AT5G04920.1 EAP30/Vps36 family protein; Swiss-Prot: sp|Q9FF81|VPS36_ARATH Vacuolar protein sorting-associated protein 36; TrEMBL-Plants: tr|V7AJ01|V7AJ01_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0303100 | LjG1.1_chr3 | 63247695 | 63252868 | - | – | ||
n.a. | Adaptin ear-binding coat-associated protein 1; TAIR: AT3G58600.1 Adaptin ear-binding coat-associated protein 1 NECAP-1; Swiss-Prot: sp|Q5E9Q4|NECP2_BOVIN Adaptin ear-binding coat-associated protein 2; TrEMBL-Plants: tr|I1LUL7|I1LUL7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0450100 | LjG1.1_chr3 | 86369824 | 86373797 | - | – | ||
n.a. | Dynamin family protein; TAIR: AT1G59610.1 dynamin-like 3; Swiss-Prot: sp|Q9LQ55|DRP2B_ARATH Dynamin-2B; TrEMBL-Plants: tr|I1MQT0|I1MQT0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0001200 | LjG1.1_chr4 | 232251 | 267769 | + | – | ||
n.a. | C2 and GRAM domain-containing protein; TAIR: AT1G03370.1 C2 calcium/lipid-binding and GRAM domain containing protein; Swiss-Prot: sp|Q9ZVT9|C2GR1_ARATH C2 and GRAM domain-containing protein At1g03370; TrEMBL-Plants: tr|I1KNM4|I1KNM4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0005000 | LjG1.1_chr4 | 829474 | 836291 | - | – | ||
n.a. | C2 and GRAM domain-containing protein; TAIR: AT1G03370.1 C2 calcium/lipid-binding and GRAM domain containing protein; Swiss-Prot: sp|Q9ZVT9|C2GR1_ARATH C2 and GRAM domain-containing protein At1g03370; TrEMBL-Plants: tr|I1KNM4|I1KNM4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0005000 | LjG1.1_chr4 | 829550 | 842552 | - | – | ||
n.a. | Dynamin, putative; TAIR: AT4G33650.1 dynamin-related protein 3A; Swiss-Prot: sp|Q8S944|DRP3A_ARATH Dynamin-related protein 3A; TrEMBL-Plants: tr|K7L2I2|K7L2I2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0040300 | LjG1.1_chr4 | 4757486 | 4766768 | + | – | ||
n.a. | C2 domain-containing protein / GRAM domain-containing protein; TAIR: AT3G59660.1 C2 domain-containing protein / GRAM domain-containing protein; Swiss-Prot: sp|Q8W4D4|BAGP1_ARATH BAG-associated GRAM protein 1; TrEMBL-Plants: tr|K7K882|K7K882_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0068800 | LjG1.1_chr4 | 8690588 | 8699044 | + | – | ||
n.a. | C2 domain-containing protein / GRAM domain-containing protein; TAIR: AT3G59660.1 C2 domain-containing protein / GRAM domain-containing protein; Swiss-Prot: sp|Q8W4D4|BAGP1_ARATH BAG-associated GRAM protein 1; TrEMBL-Plants: tr|K7K881|K7K881_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0068800 | LjG1.1_chr4 | 8691301 | 8698341 | + | – |