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PS00502

Source: ProSitePatterns

Description

Polygalacturonase active site.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004650
Molecular function Polygalacturonase activity Catalysis of the random hydrolysis of (1->4)-alpha-D-galactosiduronic linkages in pectate and other galacturonans.
Subterm of
GO:0005975
Biological process Carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
Subterm of

Associated Lotus transcripts 69

Transcript Name Description Predicted domains Domain count
Lj0g3v0067429.1
– PREDICTED: probable polygalacturonase At3g15720-like [Glycine max] gi|356544252|ref|XP_003540568.1|
Domains
11
Lj0g3v0135849.1
– PREDICTED: polygalacturonase-like [Glycine max] gi|356503157|ref|XP_003520378.1|
Domains
17
Lj0g3v0243179.1
– PREDICTED: probable polygalacturonase At3g15720-like [Cicer arietinum] gi|502080783|ref|XP_004486675.1|
Domains
17
Lj0g3v0307509.1
– PREDICTED: polygalacturonase-like [Cicer arietinum] gi|502086987|ref|XP_004488391.1|
Domains
9
Lj0g3v0314639.1
– PREDICTED: probable polygalacturonase At1g80170-like [Glycine max] gi|356565972|ref|XP_003551209.1|
Domains
19
Lj0g3v0354459.1
– PREDICTED: polygalacturonase-like [Glycine max] gi|356528552|ref|XP_003532865.1|
Domains
11
Lj1g3v0589910.1
– PREDICTED: polygalacturonase-like [Cicer arietinum] gi|502086987|ref|XP_004488391.1|
Domains
11
Lj1g3v0589920.1
– PREDICTED: polygalacturonase-like [Cicer arietinum] gi|502086987|ref|XP_004488391.1|
Domains
11
Lj1g3v3948080.1
– Polygalacturonase [Medicago truncatula] gi|357450939|ref|XP_003595746.1|
Domains
18
Lj1g3v4263350.1
– PREDICTED: polygalacturonase-like [Glycine max] gi|356570487|ref|XP_003553417.1|
Domains
11
Lj1g3v4263350.2
– PREDICTED: polygalacturonase-like [Glycine max] gi|356570487|ref|XP_003553417.1|
Domains
11
Lj1g3v4831740.1
– PREDICTED: polygalacturonase At1g48100-like [Glycine max] gi|356571013|ref|XP_003553676.1|
Domains
11
Lj2g3v0960420.1
– Polygalacturonase PG1 precursor [Glycine max] gi|351724723|ref|NP_001238091.1|
Domains
19
Lj2g3v1414930.1
– Polygalacturonase [Medicago truncatula] gi|357485855|ref|XP_003613215.1|
Domains
19
Lj3g3v0075600.1
– PREDICTED: probable polygalacturonase At1g80170-like isoform X1 [Cicer arietinum] gi|502080813|ref|XP_004486686.1|
Domains
11
Lj3g3v0075600.2
– PREDICTED: probable polygalacturonase At1g80170-like [Glycine max] gi|356557253|ref|XP_003546932.1|
Domains
11
Lj3g3v0642490.1
– PREDICTED: polygalacturonase-like [Glycine max] gi|356503157|ref|XP_003520378.1|
Domains
17
Lj4g3v0200180.1
– PREDICTED: polygalacturonase At1g48100-like [Glycine max] gi|356524988|ref|XP_003531109.1|
Domains
18
Lj4g3v0668090.1
– PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Glycine max] gi|356577135|ref|XP_003556683.1|
Domains
19
Lj4g3v1333460.1
– PREDICTED: probable polygalacturonase At3g15720-like [Cicer arietinum] gi|502092038|ref|XP_004489698.1|
Domains
9
Lj4g3v2290300.1
– PREDICTED: polygalacturonase-like [Cicer arietinum] gi|502150928|ref|XP_004508193.1|
Domains
11
Lj4g3v2295730.1
– Polygalacturonase [Medicago truncatula] gi|357450573|ref|XP_003595563.1|
Domains
15
Lj5g3v1551050.1
– PREDICTED: polygalacturonase At1g48100-like [Cicer arietinum] gi|502117618|ref|XP_004495880.1|
Domains
19
Lj6g3v0607050.1
– PREDICTED: polygalacturonase-like [Glycine max] gi|356551848|ref|XP_003544285.1|
Domains
19
Lj6g3v1091180.1
– PREDICTED: probable polygalacturonase At3g15720-like [Glycine max] gi|356544252|ref|XP_003540568.1|
Domains
11
Lj6g3v1093540.1
– Polygalacturonase [Medicago truncatula] gi|357450573|ref|XP_003595563.1|
Domains
15
LotjaGi0g1v0000500.1
– Pectin lyase-like superfamily protein; TAIR: AT3G57510.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|P35336|PGLR_ACTDE Polygalacturonase; TrEMBL-Plants: tr|A0A151T8E5|A0A151T8E5_CAJCA Polygalacturonase; Found in the gene: LotjaGi0g1v0000500
Domains
18
LotjaGi1g1v0048800.1
– Pectin lyase-like superfamily protein, putative; TAIR: AT3G07970.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|P35336|PGLR_ACTDE Polygalacturonase; TrEMBL-Plants: tr|G7IGR9|G7IGR9_MEDTR Polygalacturonase; Found in the gene: LotjaGi1g1v0048800
Domains
11
LotjaGi1g1v0048800.2
– Pectin lyase-like superfamily protein, putative; TAIR: AT3G07970.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|P35336|PGLR_ACTDE Polygalacturonase; TrEMBL-Plants: tr|G7IGR9|G7IGR9_MEDTR Polygalacturonase; Found in the gene: LotjaGi1g1v0048800
Domains
11
LotjaGi1g1v0160900.1
– Pectin lyase-like superfamily protein, putative; TAIR: AT3G07840.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q40312|PGLR_MEDSA Polygalacturonase; TrEMBL-Plants: tr|I3SLB3|I3SLB3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0160900
Domains
16
LotjaGi1g1v0161100.1
– Pectin lyase-like superfamily protein, putative; TAIR: AT3G07840.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q40312|PGLR_MEDSA Polygalacturonase; TrEMBL-Plants: tr|I3SLB3|I3SLB3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0161100
Domains
16
LotjaGi1g1v0208200.1
– Pectin lyase-like superfamily protein, putative; TAIR: AT3G07820.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q40312|PGLR_MEDSA Polygalacturonase; TrEMBL-Plants: tr|I3SLB3|I3SLB3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0208200
Domains
19
LotjaGi1g1v0208300.1
– Pectin lyase-like superfamily protein, putative; TAIR: AT3G07820.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q40312|PGLR_MEDSA Polygalacturonase; TrEMBL-Plants: tr|I3SLB3|I3SLB3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0208300
Domains
18
LotjaGi1g1v0302000.1
– Pectin lyase-like superfamily protein; TAIR: AT3G15720.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q9LW07|PGLR3_ARATH Probable polygalacturonase At3g15720; TrEMBL-Plants: tr|G7JXT8|G7JXT8_MEDTR Polygalacturonase/glycoside hydrolase family protein; Found in the gene: LotjaGi1g1v0302000
Domains
11
LotjaGi1g1v0305700.1
– Pectin lyase-like superfamily protein; TAIR: AT4G35670.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q9LW07|PGLR3_ARATH Probable polygalacturonase At3g15720; TrEMBL-Plants: tr|G7JXT8|G7JXT8_MEDTR Polygalacturonase/glycoside hydrolase family protein; Found in the gene: LotjaGi1g1v0305700
Domains
15
LotjaGi1g1v0305700.2
– Pectin lyase-like superfamily protein, putative; TAIR: AT4G35670.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q9LW07|PGLR3_ARATH Probable polygalacturonase At3g15720; TrEMBL-Plants: tr|G7JXT8|G7JXT8_MEDTR Polygalacturonase/glycoside hydrolase family protein; Found in the gene: LotjaGi1g1v0305700
Domains
17
LotjaGi1g1v0306000.1
– Pectin lyase-like superfamily protein, putative; TAIR: AT3G15720.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q9LW07|PGLR3_ARATH Probable polygalacturonase At3g15720; TrEMBL-Plants: tr|G7JXT8|G7JXT8_MEDTR Polygalacturonase/glycoside hydrolase family protein; Found in the gene: LotjaGi1g1v0306000
Domains
11
LotjaGi1g1v0601700.2
– Pectin lyase-like superfamily protein; TAIR: AT2G43890.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|P48979|PGLR_PRUPE Polygalacturonase; TrEMBL-Plants: tr|I1J6I6|I1J6I6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0601700
Domains
17
LotjaGi1g1v0635700.1
– Pectin lyase-like superfamily protein; TAIR: AT4G35670.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q9LW07|PGLR3_ARATH Probable polygalacturonase At3g15720; TrEMBL-Plants: tr|G7JXT8|G7JXT8_MEDTR Polygalacturonase/glycoside hydrolase family protein; Found in the gene: LotjaGi1g1v0635700
Domains
18
LotjaGi1g1v0639300.1
– Pectin lyase-like superfamily protein, putative; TAIR: AT3G07970.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|P35336|PGLR_ACTDE Polygalacturonase; TrEMBL-Plants: tr|A0A151TM36|A0A151TM36_CAJCA Polygalacturonase; Found in the gene: LotjaGi1g1v0639300
Domains
18
LotjaGi1g1v0719600.1
– Pectin lyase-like superfamily protein; TAIR: AT2G41850.1 polygalacturonase ADPG2-like protein; Swiss-Prot: sp|P35336|PGLR_ACTDE Polygalacturonase; TrEMBL-Plants: tr|K7MYD0|K7MYD0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0719600
Domains
16
LotjaGi1g1v0756300_LC.1
– Polygalacturonase; TAIR: AT1G02460.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q949Z1|PGLR4_ARATH Polygalacturonase At1g48100; TrEMBL-Plants: tr|I1JQV3|I1JQV3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0756300_LC
Domains
11
LotjaGi2g1v0244200.1
– Polygalacturonase; TAIR: AT5G14650.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q949Z1|PGLR4_ARATH Polygalacturonase At1g48100; TrEMBL-Plants: tr|Q9SWS3|Q9SWS3_SOYBN Polygalacturonase PG1; Found in the gene: LotjaGi2g1v0244200
Domains
18
LotjaGi2g1v0321300.1
– Polygalacturonase; TAIR: AT1G60590.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q949Z1|PGLR4_ARATH Polygalacturonase At1g48100; TrEMBL-Plants: tr|G7K092|G7K092_MEDTR Polygalacturonase; Found in the gene: LotjaGi2g1v0321300
Domains
17
LotjaGi3g1v0009600.1
– Pectin lyase-like superfamily protein, putative; TAIR: AT5G17200.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q9LW07|PGLR3_ARATH Probable polygalacturonase At3g15720; TrEMBL-Plants: tr|G7IUV8|G7IUV8_MEDTR Polygalacturonase/glycoside hydrolase family protein; Found in the gene: LotjaGi3g1v0009600
Domains
17
LotjaGi3g1v0011100.1
– Pectin lyase-like superfamily protein; TAIR: AT1G80170.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q94AJ5|PGLR5_ARATH Probable polygalacturonase At1g80170; TrEMBL-Plants: tr|I1MCH5|I1MCH5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0011100
Domains
15
LotjaGi3g1v0074500.1
– Polygalacturonase; TAIR: AT3G59850.2 Pectin lyase-like superfamily protein; Swiss-Prot: sp|P48979|PGLR_PRUPE Polygalacturonase; TrEMBL-Plants: tr|I1JMF5|I1JMF5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0074500
Domains
11
LotjaGi3g1v0075700.1
– Pectin lyase-like superfamily protein, putative; TAIR: AT5G17200.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q9LW07|PGLR3_ARATH Probable polygalacturonase At3g15720; TrEMBL-Plants: tr|A0A0L9VUQ8|A0A0L9VUQ8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0075700
Domains
19
LotjaGi3g1v0075800.1
– Pectin lyase superfamily protein; TAIR: AT5G17200.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q9LW07|PGLR3_ARATH Probable polygalacturonase At3g15720; TrEMBL-Plants: tr|A0A072TLD8|A0A072TLD8_MEDTR Polygalacturonase; Found in the gene: LotjaGi3g1v0075800
Domains
18
LotjaGi3g1v0075900.1
– Pectin lyase-like superfamily protein, putative; TAIR: AT5G17200.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q9LW07|PGLR3_ARATH Probable polygalacturonase At3g15720; TrEMBL-Plants: tr|A0A072TLD8|A0A072TLD8_MEDTR Polygalacturonase; Found in the gene: LotjaGi3g1v0075900
Domains
17
LotjaGi3g1v0122200.1
– Pectin lyase-like superfamily protein, putative; TAIR: AT3G07970.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q9SFB7|QRT2_ARATH Polygalacturonase QRT2; TrEMBL-Plants: tr|K7ME92|K7ME92_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0122200
Domains
18
LotjaGi3g1v0292600.1
– Pectin lyase-like superfamily protein; TAIR: AT4G35670.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q9LW07|PGLR3_ARATH Probable polygalacturonase At3g15720; TrEMBL-Plants: tr|A0A072U7D4|A0A072U7D4_MEDTR Polygalacturonase; Found in the gene: LotjaGi3g1v0292600
Domains
15
LotjaGi3g1v0382700.1
– Pectin lyase-like superfamily protein, putative; TAIR: AT1G78400.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q6H9K0|PGLR2_PLAAC Exopolygalacturonase; TrEMBL-Plants: tr|A0A072TPY4|A0A072TPY4_MEDTR Polygalacturonase/glycoside hydrolase family protein; Found in the gene: LotjaGi3g1v0382700
Domains
17
LotjaGi4g1v0020100.1
– Polygalacturonase; TAIR: AT1G48100.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q949Z1|PGLR4_ARATH Polygalacturonase At1g48100; TrEMBL-Plants: tr|A0A0L9T4I6|A0A0L9T4I6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0020100
Domains
18
LotjaGi4g1v0020100.2
– Polygalacturonase; TAIR: AT1G48100.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q949Z1|PGLR4_ARATH Polygalacturonase At1g48100; TrEMBL-Plants: tr|K7KQ07|K7KQ07_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0020100
Domains
11
LotjaGi4g1v0085800.1
– Pectin lyase-like superfamily protein; TAIR: AT2G43870.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|P48979|PGLR_PRUPE Polygalacturonase; TrEMBL-Plants: tr|G7JIR7|G7JIR7_MEDTR Polygalacturonase; Found in the gene: LotjaGi4g1v0085800
Domains
18
LotjaGi4g1v0338300.1
– Pectin lyase-like superfamily protein, putative; TAIR: AT2G43870.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q39786|PGLR_GOSHI Polygalacturonase; TrEMBL-Plants: tr|A0A151STK5|A0A151STK5_CAJCA Polygalacturonase; Found in the gene: LotjaGi4g1v0338300
Domains
19
LotjaGi5g1v0241100.1
– Polygalacturonase; TAIR: AT1G02460.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q949Z1|PGLR4_ARATH Polygalacturonase At1g48100; TrEMBL-Plants: tr|I1JBC8|I1JBC8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0241100
Domains
11
LotjaGi5g1v0241100.2
– Polygalacturonase family; TAIR: AT1G02460.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q949Z1|PGLR4_ARATH Polygalacturonase At1g48100; TrEMBL-Plants: tr|A0A151SMX4|A0A151SMX4_CAJCA Polygalacturonase family; Found in the gene: LotjaGi5g1v0241100
Domains
19
LotjaGi5g1v0241100.3
– Polygalacturonase; TAIR: AT1G02460.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q949Z1|PGLR4_ARATH Polygalacturonase At1g48100; TrEMBL-Plants: tr|I1JBC8|I1JBC8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0241100
Domains
11
LotjaGi5g1v0241100.4
– Polygalacturonase; TAIR: AT1G02460.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q949Z1|PGLR4_ARATH Polygalacturonase At1g48100; TrEMBL-Plants: tr|I1JBC8|I1JBC8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0241100
Domains
11
LotjaGi5g1v0241100.5
– Polygalacturonase family; TAIR: AT1G02460.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q949Z1|PGLR4_ARATH Polygalacturonase At1g48100; TrEMBL-Plants: tr|A0A151SMX4|A0A151SMX4_CAJCA Polygalacturonase family; Found in the gene: LotjaGi5g1v0241100
Domains
19
LotjaGi5g1v0248800.1
– Pectin lyase-like superfamily protein, putative; TAIR: AT1G02790.1 polygalacturonase 4; Swiss-Prot: sp|P49062|PGLR1_ARATH Exopolygalacturonase clone GBGE184; TrEMBL-Plants: tr|I1JBJ8|I1JBJ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0248800
Domains
17
LotjaGi6g1v0034500.1
– Pectin lyase-like superfamily protein; TAIR: AT4G35670.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q9LW07|PGLR3_ARATH Probable polygalacturonase At3g15720; TrEMBL-Plants: tr|G7JXT8|G7JXT8_MEDTR Polygalacturonase/glycoside hydrolase family protein; Found in the gene: LotjaGi6g1v0034500
Domains
19
LotjaGi6g1v0034600.1
– Pectin lyase-like superfamily protein; TAIR: AT4G35670.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q9LW07|PGLR3_ARATH Probable polygalacturonase At3g15720; TrEMBL-Plants: tr|G7JXT8|G7JXT8_MEDTR Polygalacturonase/glycoside hydrolase family protein; Found in the gene: LotjaGi6g1v0034600
Domains
19
LotjaGi6g1v0132200.1
– Pectin lyase-like superfamily protein, putative; TAIR: AT3G07820.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q40312|PGLR_MEDSA Polygalacturonase; TrEMBL-Plants: tr|V7C552|V7C552_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0132200
Domains
18
LotjaGi6g1v0208900.1
– Pectin lyase-like superfamily protein, putative; TAIR: AT5G17200.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q9LW07|PGLR3_ARATH Probable polygalacturonase At3g15720; TrEMBL-Plants: tr|A0A0B2RJE5|A0A0B2RJE5_GLYSO Putative polygalacturonase; Found in the gene: LotjaGi6g1v0208900
Domains
11
LotjaGi6g1v0211100.1
– Pectin lyase superfamily protein; TAIR: AT2G43880.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|P48979|PGLR_PRUPE Polygalacturonase; TrEMBL-Plants: tr|A0A1J7H996|A0A1J7H996_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0211100
Domains
15
LotjaGi6g1v0252600.1
– Pectin lyase-like superfamily protein, putative; TAIR: AT4G18180.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q39766|PGLR_GOSBA Polygalacturonase; TrEMBL-Plants: tr|A0A072VG89|A0A072VG89_MEDTR Polygalacturonase; Found in the gene: LotjaGi6g1v0252600
Domains
15

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SignalP-noTM SignalP_GRAM_NEGATIVE 1 1.45